fbxl2 (LOC106588753)


Basic Information

Item Value
gene id fbxl2
gene name LOC106588753
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 52838264 ~ 52858741 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572442.2
GACATACCTCACCGTTAACGGACCGGCGGATATTTTGATGTTACGTGGCTGAACATCTCTGATGCGAAGAGAACTCGCAATCAAAACAAGTCGGCCACGCGTGCTTTTCCCGCAGAAATGACGTCATCACCACGGTCCCTTCCCATGTCCACGATCGACAACAGCTCCTAGAATAACAGAATACACAGTTAAATTACGGTTGTTCTTCCATCTATAAACggataaaatatatttgataattTCTTCCACATTTTTGACGTTTCAAACCGCTCGAGCAAGAGGGAGGGATACTGAGGCCAGCTGATTTGGTCTGGGAGCCGTCTGAGAGGCGGAAGTGAGGTCACCAGGAGCTCGTccatgttattattgttattttggtCGCTGGCAGTGTGATGAGACGGACTGGAGAGCCGTCGGGCTCCAAGACTAGGCTACTGCTCTTCCAGGCCGCCCCAGACTAAACCTCACAGCCACCCCCGAAAAAGGAGCACTGTCGCCAACAGGGGAGAGCGCCCAGCCTCTTCGACCGTCACAGGCGACAAAAACAATACGGTATTCGGCAAACCCAACGCTAGCCCCAGACTTGTATGTGTGCGGTAACACACCGCGACGTGCCTCCGCAGATATGAACGGCATCACCAAGGGCAGGTTCGAGgtgttcTCCAACAGTGATGAAGCTCCCATTAACAAGAAGCTTCCCAAGGAGCTTCTGctcagaatcTTCTCCTATCTTGATGTGATCACATTGTGCAGGTGTGCCCAGGTATCCAAGGCGTGGAATGTCCTGGCCTTGGATGGTAGTAACTGGCAGAAGATTGACCTCTTCAACTTCCAGACAGACAtagagggtagAGTAGTGGAGAACATCTCCAAGCGATGTGGAGGCTTCCTGAGGCAGCTGAGCTTGAGGGGTTGTCTCAGTGTGGGGGACGCATCCATGAAGACGTTTTCCCAGAACTGCCGTAGCATTGAGGTGTTGAACCTGAACGGCTGCACTAAGATCACAGACAGCACCTGTCTCAGCCTCTCCAAGTTCTGCTGCAAACTCAAACAGCTGGACCTCACCTCCTGTGTGTCTGTTACCAACCACTCCCTCAAAGCTCTCAGTGATGGCTGTCGTATGTTGGAGATGTTGAACCTGTCGTGGTGTGACCAGATCACCAGAGATGGCATCGAGGCTCTGGCCCGGGGCTGTAACAACCTACGAGCCCTGTTCCTACGCGGCtgcacacagtTGGAGGATGGAGCACTGAAACCCCTTCAGAAACACTGTCCTGAACTAACCACTATCAACATGCAGTCCTGCTCACAGATAACTGATGATGGCTTGGTCAGTCTGTGTCGGGGGTGCCACAAGCTGCAGGTCCTGTGTATCTCTGGCTGCAGTAACATTACAGACGCCTCTCTCACTGCTCTGGGTCTCAACTGTCCCGGACTGAAgatcTTGGAGGCTGCGCGATGTTCACAGGTTACAGACGCTGGGTTTACTGTACTGGCCAGGAATTGTCATGAGATGGAAAAAATGGATTTAGAAGAATGTATTTTGGTGACTGACAACACACTAGTCCAGCTCGCTATTCACTGCCCTCGCCTGCAAGCACTGtctctctcccaCTGTGAGTTGATAACAGACGATGGTATCAGGGCGctgagcagcagtgtgtgtggacAGGAGCGCCTCACAGTGGTGGAGTTGGATAACTGCCCTCTGATCACAGACGTGACTCTGGAGCACCTGAAGAACTGCCACCGTCTGGAAAGGATAGAACTCTACGACTGCCAGCAGGTCACCAGGGCCGGCATCAAACGCATACGGGCTCATCTCCCAGAGATAAAAGTCCACGCCTACTTTGCCCCGGTGACGCCCCCTCCTTCGGTGCACGGCGGGGGCCAGAGGCTGTGTCGCTGCTGCATCATCCTCTGACAGTGGAGGGCCAGGGGGGGTCAGCTCTGCCTGCAGGTCCTACTGCTGTGACCCCCCCCAACAATAACCCACCTGATCCCTGCAAGATGATGAGACAGACCCTGAACCCCACCACTACACAACTacaccctgaaccccaccacaagACAACTACACCCTAAACCccaccacaactacaccacaatacctggaaccccaccccaccacaccacaacTATACCACAATACCCTGAACCCCGCCACTACACAACTacaccctgaaccccac
>XM_021572443.2
CGACATACCTCACCGTTAACGGACCGGCGGATATTTTGATGTTACGTGGCTGAACATCTCTGATGCGAAGAGAACTCGCAATCAAAACAAGTCGGCCACGCGTGCTTTTCCCGCAGAAATGACGTCATCACCACGGTCCCTTCCCATGTCCACGATCGACAACAGCTCCTAGAATAACAGAATACACAGTTAAATTACGGTTGTTCTTCCATCTATAAACggataaaatatatttgataattTCTTCCACATTTTTGACGTTTCAAACCGCTCGAGCAAGAGGGAGGGATACTGAGGCCAGCTGATTTGGTCTGGGAGCCGTCTGAGAGGCGGAAGTGAGGTCACCAGGAGCTCGTccatgttattattgttattttggtCGCTGGCAGTGTGATGAGACGGACTGGAGAGCCGTCGGGCTCCAAGACTAGGCTACTGCTCTTCCAGGCCGCCCCAGACTAAACCTCACAGCCACCCCCGAAAAAGGAGCACTGTCGCCAACAGGGGAGAGCGCCCAGCCTCTTCGACCGTCACAGGCGACAAAAACAATACGGTATTCGGCAAACCCAACGCTAGCCCCAGACTTGTATGTGTGCGGTAACACACCGCGACGTGCCTCCGCAGATATGAACGGCATCACCAAGGGCAGGTTCGAGgtgttcTCCAACAGTGATGAAGCTCCCATTAACAAGAAGCTTCCCAAGGAGCTTCTGctcagaatcTTCTCCTATCTTGATGTGATCACATTGTGCAGGTGTGCCCAGGTATCCAAGGCGTGGAATGTCCTGGCCTTGGATGGTAGTAACTGGCAGAAGATTGACCTCTTCAACTTCCAGACAGACAtagagggtagAGTAGTGGAGAACATCTCCAAGCGATGTGGAGGCTTCCTGAGGCAGCTGAGCTTGAGGGGTTGTCTCAGTGTGGGGGACGCATCCATGAAGACGTTTTCCCAGAACTGCCGTAGCATTGAGGTGTTGAACCTGAACGGCTGCACTAAGATCACAGACAGCACCTGTCTCAGCCTCTCCAAGTTCTGCTGCAAACTCAAACAGCTGGACCTCACCTCCTGTGTGTCTGTTACCAACCACTCCCTCAAAGCTCTCAGTGATGGCTGTCGTATGTTGGAGATGTTGAACCTGTCGTGGTGTGACCAGATCACCAGAGATGGCATCGAGGCTCTGGCCCGGGGCTGTAACAACCTACGAGCCCTGTTCCTACGCGGCtgcacacagtTGGAGGATGGAGCACTGAAACCCCTTCAGAAACACTGTCCTGAACTAACCACTATCAACATGCAGTCCTGCTCAATAACTGATGATGGCTTGGTCAGTCTGTGTCGGGGGTGCCACAAGCTGCAGGTCCTGTGTATCTCTGGCTGCAGTAACATTACAGACGCCTCTCTCACTGCTCTGGGTCTCAACTGTCCCGGACTGAAgatcTTGGAGGCTGCGCGATGTTCACAGGTTACAGACGCTGGGTTTACTGTACTGGCCAGGAATTGTCATGAGATGGAAAAAATGGATTTAGAAGAATGTATTTTGGTGACTGACAACACACTAGTCCAGCTCGCTATTCACTGCCCTCGCCTGCAAGCACTGtctctctcccaCTGTGAGTTGATAACAGACGATGGTATCAGGGCGctgagcagcagtgtgtgtggacAGGAGCGCCTCACAGTGGTGGAGTTGGATAACTGCCCTCTGATCACAGACGTGACTCTGGAGCACCTGAAGAACTGCCACCGTCTGGAAAGGATAGAACTCTACGACTGCCAGCAGGTCACCAGGGCCGGCATCAAACGCATACGGGCTCATCTCCCAGAGATAAAAGTCCACGCCTACTTTGCCCCGGTGACGCCCCCTCCTTCGGTGCACGGCGGGGGCCAGAGGCTGTGTCGCTGCTGCATCATCCTCTGACAGTGGAGGGCCAGGGGGGGTCAGCTCTGCCTGCAGGTCCTACTGCTGTGACCCCCCCCAACAATAACCCACCTGATCCCTGCAAGATGATGAGACAGACCCTGAACCCCACCACTACACAACTacaccctgaaccccaccacaagACAACTACACCCTAAACCccaccacaactacaccacaatacctggaaccccaccccaccacaccacaacTATACCACAATACCCTGAACCCCGCCACTACACAACTacaccctgaaccccac

Function

NR:

description
F-box/LRR-repeat protein 2-like isoform X2

GO: NA

KEGG:

id description
K10268 FBXL2_20; F-box and leucine-rich repeat protein 2/20

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572442.2 False 2192 mRNA 0.53 14 52838264 52858740
XM_021572443.2 True 2190 mRNA 0.53 14 52838264 52858741

Neighbor

gene id symbol gene type direction distance location
clasp2 clasp2 coding downstream 13292 52731509 ~ 52824972 (-)
ubp1 LOC106588748 coding downstream 109348 52712553 ~ 52728916 (-)
LOC110496501 pdcd6ip coding downstream 133393 52677421 ~ 52704871 (-)
arpp21 LOC106588747 coding downstream 165543 52649871 ~ 52672721 (-)
arhgap4b LOC100380863 coding downstream 200529 52606702 ~ 52637735 (-)
LOC110496507 LOC106588754 coding upstream 41930 52900671 ~ 52905814 (-)
LOC110496850 LOC106588723 coding upstream 59943 52918684 ~ 53015298 (-)
LOC110496514 LOC106588757 coding upstream 324602 53183343 ~ 53187737 (-)
mturn LOC106588759 coding upstream 329334 53188075 ~ 53195009 (-)
LOC110496518 LOC106588741 coding upstream 433672 53292413 ~ 53350447 (-)
G1562427 NA non-coding downstream 7014 52827050 ~ 52831250 (-)
G1561396 NA non-coding downstream 58520 52779382 ~ 52779744 (-)
G1561288 NA non-coding downstream 98255 52675749 ~ 52740009 (-)
G1561378 NA non-coding downstream 163094 52674950 ~ 52675170 (-)
G1561375 NA non-coding downstream 166183 52671757 ~ 52672081 (-)
G1562451 NA non-coding upstream 47951 52906692 ~ 52918374 (-)
G1562450 LOC106588746 non-coding upstream 137915 52996656 ~ 53084936 (-)
G1562458 NA non-coding upstream 177647 53036388 ~ 53039622 (-)
G1562554 NA non-coding upstream 239223 53097964 ~ 53098713 (-)
G1562566 NA non-coding upstream 249243 53107984 ~ 53109769 (-)
G1561279 NA other downstream 190487 52644989 ~ 52647777 (-)
LOC110496491 LOC106588724 other downstream 480954 52352725 ~ 52396978 (-)
G1561167 NA other downstream 587775 52249354 ~ 52250489 (-)
trak1b LOC106588779 other downstream 655057 52179320 ~ 52240648 (-)
G1560339 NA other downstream 1382979 51381731 ~ 51455285 (-)
G1562762 NA other upstream 739909 53598650 ~ 53602694 (-)
tomm7 NA other upstream 763159 53621900 ~ 53628443 (-)
G1562816 LOC100136012 other upstream 893665 53752406 ~ 53752683 (-)
G1562828 NA other upstream 1015669 53874410 ~ 53875592 (-)
mrpl3 mrpl3 other upstream 1030968 53887137 ~ 53895002 (-)

Expression


Co-expression Network