Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941187 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53122112 ~ 53128537 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037510.1 | True | 662 | mRNA | 0.48 | 4 | 53122112 | 53128537 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496510 | LOC106588740 | coding | upstream | 12208 | 53077029 ~ 53109904 (+) |
| si:ch211-199g17.2 | LOC106588746 | coding | upstream | 70841 | 52996763 ~ 53051271 (+) |
| fkbp9 | LOC106588749 | coding | upstream | 203731 | 52906399 ~ 52918381 (+) |
| susd5 | LOC106588743 | coding | upstream | 229653 | 52862680 ~ 52892459 (+) |
| cyhr1 | LOC106588755 | coding | upstream | 477293 | 52641237 ~ 52644819 (+) |
| LOC110496945 | LOC106588722 | coding | downstream | 10614 | 53139151 ~ 53141355 (+) |
| LOC110496511 | LOC106588739 | coding | downstream | 12986 | 53141523 ~ 53173990 (+) |
| snrpd1 | snrpd1 | coding | downstream | 47124 | 53175661 ~ 53178938 (+) |
| ggcta | LOC106588758 | coding | downstream | 52354 | 53180891 ~ 53183494 (+) |
| sh3bp5a | LOC106588751 | coding | downstream | 70001 | 53198538 ~ 53275056 (+) |
| G1561433 | NA | non-coding | upstream | 80273 | 53038951 ~ 53041839 (+) |
| G1561511 | NA | non-coding | upstream | 101583 | 53019742 ~ 53020529 (+) |
| G1561478 | LOC106588754 | non-coding | upstream | 218052 | 52900686 ~ 52904060 (+) |
| G1561429 | NA | non-coding | upstream | 225701 | 52864880 ~ 52896411 (+) |
| G1561562 | NA | non-coding | downstream | 7206 | 53135743 ~ 53136526 (+) |
| G1561593 | LOC106588741 | non-coding | downstream | 163894 | 53292431 ~ 53299970 (+) |
| G1561723 | NA | non-coding | downstream | 366860 | 53495397 ~ 53495714 (+) |
| G1561712 | NA | non-coding | downstream | 392927 | 53521464 ~ 53524347 (+) |
| G1561739 | NA | non-coding | downstream | 411237 | 53539774 ~ 53541773 (+) |
| G1560957 | NA | other | upstream | 680171 | 52441146 ~ 52441941 (+) |
| G1560911 | NA | other | upstream | 766277 | 52355297 ~ 52355835 (+) |
| G1560811 | LOC100846955 | other | upstream | 864582 | 52256636 ~ 52257530 (+) |
| LOC110496482 | LOC106588780 | other | upstream | 1048083 | 52036488 ~ 52083470 (+) |
| G1559041 | thsd7a | other | upstream | 2486546 | 50633743 ~ 50635566 (+) |
| G1561544 | LOC106588750 | other | downstream | 149253 | 53277790 ~ 53288465 (+) |
| LOC110514975 | LOC106588804 | other | downstream | 589832 | 53713836 ~ 53730416 (+) |
| G1561845 | NA | other | downstream | 688627 | 53817164 ~ 53840871 (+) |
| G1561856 | NA | other | downstream | 743636 | 53872173 ~ 53876930 (+) |
