klhl7 (klhl7)


Basic Information

Item Value
gene id klhl7
gene name klhl7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 53656226 ~ 53663553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572484.2
TTCTACCACAACAGGGAGCCGGAAGAAGTGATCAGTGCCAGAGATACTCTGGCAGTGCTAGCCGGCTCGCTAACACATAAAATCAGAACCCACTTTTCTTAACTTCTTCTGTCAGCAAACTAAACTAATATTATAGCCCAGCGGTTTACTCGCAGCGAGTCAACATCAAGATTAGTGTATATACGAGCTGGACATGCCTATGTATGTAGCTAGCTGCTGAACTGCACGCAgtctatatagctagctagctacgttagcgTAATTACTATCTCCAAAACAAACAGGGTGTGCTGTGCAGTGCAGTGGACTTTGGTAGCAGCAGAGTGGGAGTTCTAGCTACTATTGCAAGCTAGCCAGTTTATCCATACACATTATTATTGGGGCGTTTTTGAATGTCCTGTCTTATGAGGCTATTGACAACCCTAAATATACACCAAATTTAGTAGCCAGCAGCTATGGCCAGCACCAGCATGGCTTCTGCAGCTGTAACAGGAGACAAACCCTCAGGTTCGGGTTCTAAGAAGAAGAATGAAAAGAAGTTGGCTTCCAAAGAGGAGTCCAGATTCCTGTCCAGTATCATGGGCGTCATGAACAACCTAAGGAAAcagGGTACCCTATGTGATGTGATCTTGGTGGTTCAGGGGAAACATATTCCTGCTCACAGAGTGGTCTTAGCTGCAGCCAGCCACTTCTTCAGCCTCATGTTTACTAccagcaTGATGGAGTCTACCAGTCACGAGGTGGAGTTGAGGAGTGCTGAGCCTGAGATCATAGAACTGTTGGTGGAGTTTGTCTACACCGCtcgtatcTCAGTGAACAGCAGTAATGTCCAGTCTTTGCTGGATGCAGCCAACCAGTACCAGATAGAACCTGTGAAGAAGATGTGTGTTGACTTCCTAAAAGAGCAAGTCGATGCAACCAACTGTCTGGgCATCTCTGCTCTAGCGGAGTGTTTGGACTGTCCAGAATTGAAGCTGTCAGCGGATGACTTTATCCATCAACACTTCACTGAGGTCTATAAATTGGATGAATTCCTCCAACTGAACGTCACCCAGCTCACACAGCTACTGCACCAAGATACACTCACTGTCCGGGCCGAGGACCAGatcTATGAGTCTGCGGTGCGGTGGCTGAAATATGATGTGTGTAACAGACAGAGTCACATGGTGGAGGTGTTGGGCTGTGTTCGCTTCCCTCTGGTGTCCAAAGCCTTCCTGTCTAAGACTGTCCAGGCTGAACCCCTCATACAGGACAACCCAGAGTGTCTCAAGATGGTCATCAGTGGGATGCGGTACCACCTGTTGTGCCCAGAGGATCGTGAGGATTTGGGAGAGAACAGTCACCCGCGACGTAAGAAACACGACTACAGGATTGCTCTGTTTGGAGGCTCGCAACCACAGTCCTGCAGATACTTCAACCCTaagGACTACAGCTGGTCAGACATTCGTTGTCCGTTTGAGAAGCGTCGTGATGCCACGGCGGTGTTCTGGGATAATGTTGTTTACATCCTGGGAGGATCTCAGCTGTTCCCCATCAAGAGGATGGACTGTTACAACGTACTGAAGGACAGCTGGTACTCCAAACTAGGCCCCCCTACACCACGGGACAGTCTGGCTGCTTGTGCCTCTCAGGGCAAGATCTACACCTCTGGAGGGTCGGAAGTAGGCAGCTCAGCGTTGAACCTGTTTGAGTGTTATGACACGCGGTGTGAGTCATGGCAGACCAAAGCCAGTATGTTGATGCCTCGCTGTAGCCACGGCAGCGTGGAGGCCAATGGGCTCATCTACGTCTGTGGAGGGTCCCTAGGCAACAACGTCTCTGGGAGGGTCCTCAGCAACTGTGAGGTCTATGACTCTGTTAAGGAGGAatggaGGGAGCTGAGTGGGATGAGGGAAGCCAGGAAGAACCACGGTCTGGTGTTTGTCAACAACAGAATCTATGCTGTGGGAGGAATGAACGGACTGgGTGGGCTGGACTCGGTGGAGTACTATGACATCGGCAGGAATGAGTGGCACGTTGCCGCGGCGATGCCGTGGCGTGGGATGAATGTGAGGTGTGCTGCAGTCAGCGGAGTGATATACGTACTGGCAGGTTTCCAGGGGGTCGGACGACTAGGACACATCCTGGAGTaccacactgacactgacagGTGGGTGACGTGCAGTAAGGTGAGGGCGTTCCCCGTCACCAGCTGTCTGATCTGTGTGGTGGACACCTGTGGGGCCaaggaagaggagactgagtcaacacacactcacacagtacccccatcatcatccacagcataaCCCAGGGTcttgaaaatgttttatttggagGACGAGAGCTGTCAGTGTGGTATGAAACTGCTGTAGTGGGATCATGTTGAAGCTTCACATTGACAGAAATCATAGAGAACACACTCTTTGAGGCGAGGTGCTGACTAGCAGAACATAGAACTGGGAAAATAGTAACATGAAAGTCACTCAGTGATGATTGTCTTCAGACAGAAGCTCATTGTTAAAGCTACAGATGAACGACTGATCTAAGAGCTCTCAGCTGATACACTTGGTCTCAACTAAACATGTTTTTATCAGACCTGGGTCAAGTACTTTTAAGTACTTGAAAGTAGATAGCACTTTTGGAACTAATCCATTGGTTGTATTTTACCGTGTAAATGAAATCAAGTGCAGCTCAAGAATTTGAAAATATGATCCTATACTATGTATTTTATGCTATTGTGTGTATTTAATTGTGCTGTTTTATATTGTACTGCAATGAAATGTAATGTCTGAGGTTATAGAAGAAACATTTttactactgtatgtatgtgatGACTGTTACATGAAATTGATAATAAACAAAGCTGGAACTGAA

Function

symbol description
klhl7 Predicted to act upstream of or within protein ubiquitination. Predicted to be part of Cul3-RING ubiquitin ligase complex. Human ortholog(s) of this gene implicated in cold-induced sweating syndrome 3 and retinitis pigmentosa 42. Orthologous to human KLHL7 (kelch like family member 7).

NR:

description
kelch-like protein 7

GO: NA

KEGG:

id description
K10445 KLHL7; kelch-like protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572484.2 True 2856 mRNA 0.48 13 53656226 53663553

Neighbor

gene id symbol gene type direction distance location
LOC110496949 LOC106588787 coding upstream 34836 53618822 ~ 53621390 (+)
itgb8 LOC106588794 coding upstream 141252 53497721 ~ 53514974 (+)
LOC110496948 NA coding upstream 249721 53404665 ~ 53406505 (+)
LOC110496519 LOC106588750 coding upstream 349100 53277785 ~ 53307126 (+)
LOC110496851 LOC106588750 coding upstream 367601 53287015 ~ 53288625 (+)
LOC110496530 LOC106588804 coding downstream 11940 53675493 ~ 53703310 (+)
LOC110514975 LOC106588804 coding downstream 50283 53713836 ~ 53730416 (+)
LOC110519664 LOC106588805 coding downstream 148530 53812083 ~ 53882492 (+)
dync1li1 LOC106588808 coding downstream 252739 53916292 ~ 53928304 (+)
LOC110496857 LOC106588809 coding downstream 320084 53983637 ~ 54008038 (+)
G1561816 LOC106588788 non-coding upstream 651 53654222 ~ 53655575 (+)
G1561788 NA non-coding upstream 6388 53643224 ~ 53649838 (+)
G1561792 NA non-coding upstream 53974 53601291 ~ 53602252 (+)
G1561769 NA non-coding upstream 68874 53586370 ~ 53587352 (+)
G1561745 LOC106588797 non-coding upstream 102634 53553298 ~ 53553592 (+)
G1561834 NA non-coding downstream 57752 53721305 ~ 53721808 (+)
G1561837 NA non-coding downstream 68336 53731889 ~ 53732113 (+)
G1561838 NA non-coding downstream 68580 53732133 ~ 53732389 (+)
G1561839 LOC105030512 non-coding downstream 69044 53732597 ~ 53732985 (+)
G1561544 LOC106588750 other upstream 367761 53277790 ~ 53288465 (+)
snrpd1 snrpd1 other upstream 477289 53175661 ~ 53178938 (+)
G1560957 NA other upstream 1214285 52441146 ~ 52441941 (+)
G1560911 NA other upstream 1300391 52355297 ~ 52355835 (+)
G1560811 LOC100846955 other upstream 1398696 52256636 ~ 52257530 (+)
G1561845 NA other downstream 153611 53817164 ~ 53840871 (+)
G1561856 NA other downstream 208620 53872173 ~ 53876930 (+)
LOC110496545 LOC106588816 other downstream 846205 54412770 ~ 54510923 (+)
G1563547 NA other downstream 1475095 55138648 ~ 55139231 (+)

Expression


Co-expression Network