aste1b (aste1)


Basic Information

Item Value
gene id aste1b
gene name aste1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 53663547 ~ 53670502 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572483.2
TTTTGACGTAGCAGGAAGTAAACTTGTCATGTCGATAGGGGAGGTTCTTTTGAAGTGAAACGGtctatatatgatgtgatgtgatgggtGTCCATGGTCTGACCAGCTATGTGGAGGGTAACAGGGGCTTGTTCCAGGACGTCAGGTTCAGAGACAGCAGACTTGTGATAGATGGCTGTAGTCTGTTCTTCAGGCTCTATCTAAACCATGGACTGGATCAGGCACACGGAGGGGACTACGATGCCTTCGCTGCCCTACTGTCTACCTTCATCTCTGCACTGGAGGCCTGCAATATACAGCCTTATGTGGTGCTGGATGGCggcatgGACCCCAGTGATAAGAAGCTGTCCACCCTGAGGCAGCGGCTGCAGAGTAAGATCCAAGAGGCTGAGTCTCTGTCCCGGGGCCGACACGGCTccgtcctccccctcctcacaaGACACGTCTTTatccaggTCCTCTCCCAGCGAGGTGTCCCGTTGGTCCAGTGCCCCGCCGAGGCAGACTGGGAGATTGCCTGCCTGGCCAATCAGTGGGGTTGTCCAGTTCTCACCAATGACAGCGACTTTTACATCTTTGACTTGCCAGGTGGTTATATTCCGTTCCGGTTCTTCCAATGGGCCAGTGTTAGCGGTTCCCCTCCACATCACTACATCCCAGCCAGACGGTACACGGTCAGTGGGATGTGCCAGCATTTCAGGGGAATGAACCGGGAACTTCTGCCGCTGTGTGCTGTCCTGGCAGGGAATGACTACACCACAAAACAAAcctacaaacacatacacacactccttcCTCAGCTAACCacgggagggaagaggggaggcaGGGGCAGAGGGAGCCCATCCCATATAGAGGGCCTCCTTCTCTGGCTCTCCTCCTTCCCTGGACCTGAGGAGGCtctggaggaggtggggagacTGACAGGaggagtagaaagaggaggaggaggagggagagggagaggaggaaggggaagagcagggagtggaggagagaagtcCGGCCTGTGTTCTGTGCTCTGGTCAGGCATGCAAGAGTACCATCTGACTCCTCAGAGCCGTCTCTCTACCTGGTTCTCTGGAGGCTCATCCAGGTCGCCAGAGGGGCTGTGGACCGCTACTCCCTGCCCGCTGCCAGAGTGGCTGTGCTGGGCCGCAGGGAGTGGGGCGATGGCCCCCCTGGTGCTGGATGTCCTGGAGCTCAGGAGGGTGCTGCTCATCCCTCAGGTGGAGAACAGCCGACTACCCAGTAGCCACTGCAGTGCCACGGCCATACGACAGGCCCTCTACGGGATCCTACTGGCCAATcaggagcagggggagaggggagagacggggtggGGAGAGTGTCACAGGGTCCAGAGACAAGGTGGACAGGAGACCCAGgtagagggacagggagaaagggggaggggaggaaggcagtgggggaagaggggaaggggcAGAGGTCAGAAACAGGGAGTGGGTCATGCGGGTGCAGAGCCTTCCTCAGGCAGTGGTCAGGGGGAGAACATTGCCCCTAGCGCTGTGGAGAGTGACAGAGGTATGAGTGTGTTTGTGGAGGAGTACGACAGACACAATCTGAACCTGAGGAAGTGCCAGGTGGAGCCACGGACCCCTGGAACCATTCTACACCTTGAGACACTCTGCCAGGCTCCTGTGTCAGTTCGGCTGGGAGTGCTGTATGATGTTCTGGGGGTGAAGGAGTCTTCTCTGTCCCCCCTACCTCCTCACCTTAGGCTGGCCCTTGGAGTGACTGGGTTCTGGAGGAGAGAGGCCAGACCTTTTCCCTCTCTACCCCAGGTACAGGCTTTGCTGCTGGGAATGGTCCATGGAGAGATGGCCCGGAACACTCATCCTGGACAGAACCAGAACACAGCCACAGAACAGAACCTGTGGATGAAGCTTCGCCTGCGGCCAGGAGACAGGCGGGGTTTCGATGTGGGCGTGGCTCATTCCCTCAGCCAATGGCAGGCCTGCCTGTGGAGTGTACTCAGTCTGAACCAGCTACTGTGTCTGCCCCTGCCTGAACCAGACACAGCATGGTTATTCAGTGGTAGTCTGGTCCATGGTTTGGTTGGCCGTCTGAGAGGGGGTTGTTCTCCTGAATCTGTTCTGGCTGCAGCTCCTCTCTCTGGGCATATCTACCGCTCCCTACTGGCTGCTCTGGAGGACTGCATGCTAAATACACTACCCTcatcagggaggaggaagagggggagaggaggagaaaaaggaggagCCCCTTCCTCCCAGGAGATCAACAACAGGTTTGCTCTGCTGATgactgaggaagaggatgaagagtgAGAGTGAGGAGACTGTAGGTTCTTTCTAGTCAACGTGGTGCTCATAAATAAACGTTGTTCCTTTTTTCACAGCTTAGAAAGAGAGGAGTGGGATGAAAAGAAAGAGATGGCCTGTGGTACACTATTTTAGGAAGCATTAATCCATGATTTAAACCCACTCAGGCGTTTCAATGACGATTCTAAATGAttaacagttctatttctgatgaAACTCTTCCTTTTAATTAGGACGTATACATATGGCCTTCATGAGGCCTTTACAGCAGCTGATGTCACCTTGTCAGCATATGAGTCTACACAAAACATTGAGCCTTTAAACTGTTTTTAATTAAAATGTGTAAACTCAATGATGTGCATATTGTTCTTATCATTAGTCTCAATGTCCACATAGCAACCTAACTATTAGTAACCAAATAAAAACATGTTCAGTT
>XM_021572482.2
tacattttgaaactcAATCTCCCATGGTTCCCTTTGCGCGTGTTTTGACGTAGCAGGAAGTAAACTTGTCATGTCGATAGGGGAGGTTCTTTTGAAGTGAAACGGGGCagtctatatatgatgtgatgtgatgggtGTCCATGGTCTGACCAGCTATGTGGAGGGTAACAGGGGCTTGTTCCAGGACGTCAGGTTCAGAGACAGCAGACTTGTGATAGATGGCTGTAGTCTGTTCTTCAGGCTCTATCTAAACCATGGACTGGATCAGGCACACGGAGGGGACTACGATGCCTTCGCTGCCCTACTGTCTACCTTCATCTCTGCACTGGAGGCCTGCAATATACAGCCTTATGTGGTGCTGGATGGCggcatgGACCCCAGTGATAAGAAGCTGTCCACCCTGAGGCAGCGGCTGCAGAGTAAGATCCAAGAGGCTGAGTCTCTGTCCCGGGGCCGACACGGCTccgtcctccccctcctcacaaGACACGTCTTTatccaggTCCTCTCCCAGCGAGGTGTCCCGTTGGTCCAGTGCCCCGCCGAGGCAGACTGGGAGATTGCCTGCCTGGCCAATCAGTGGGGTTGTCCAGTTCTCACCAATGACAGCGACTTTTACATCTTTGACTTGCCAGGTGGTTATATTCCGTTCCGGTTCTTCCAATGGGCCAGTGTTAGCGGTTCCCCTCCACATCACTACATCCCAGCCAGACGGTACACGGTCAGTGGGATGTGCCAGCATTTCAGGGGAATGAACCGGGAACTTCTGCCGCTGTGTGCTGTCCTGGCAGGGAATGACTACACCACAAAACAAAcctacaaacacatacacacactccttcCTCAGCTAACCacgggagggaagaggggaggcaGGGGCAGAGGGAGCCCATCCCATATAGAGGGCCTCCTTCTCTGGCTCTCCTCCTTCCCTGGACCTGAGGAGGCtctggaggaggtggggagacTGACAGGaggagtagaaagaggaggaggaggagggagagggagaggaggaaggggaagagcagggagtggaggagagaagtcCGGCCTGTGTTCTGTGCTCTGGTCAGGCATGCAAGAGTACCATCTGACTCCTCAGAGCCGTCTCTCTACCTGGTTCTCTGGAGGCTCATCCAGGTCGCCAGAGGGGCTGTGGACCGCTACTCCCTGCCCGCTGCCAGAGTGGCTGTGCTGGGCCGCAGGGAGTGGGGCGATGGCCCCCCTGGTGCTGGATGTCCTGGAGCTCAGGAGGGTGCTGCTCATCCCTCAGGTGGAGAACAGCCGACTACCCAGTAGCCACTGCAGTGCCACGGCCATACGACAGGCCCTCTACGGGATCCTACTGGCCAATcaggagcagggggagaggggagagacggggtggGGAGAGTGTCACAGGGTCCAGAGACAAGGTGGACAGGAGACCCAGgtagagggacagggagaaagggggaggggaggaaggcagtgggggaagaggggaaggggcAGAGGTCAGAAACAGGGAGTGGGTCATGCGGGTGCAGAGCCTTCCTCAGGCAGTGGTCAGGGGGAGAACATTGCCCCTAGCGCTGTGGAGAGTGACAGAGGTATGAGTGTGTTTGTGGAGGAGTACGACAGACACAATCTGAACCTGAGGAAGTGCCAGGTGGAGCCACGGACCCCTGGAACCATTCTACACCTTGAGACACTCTGCCAGGCTCCTGTGTCAGTTCGGCTGGGAGTGCTGTATGATGTTCTGGGGGTGAAGGAGTCTTCTCTGTCCCCCCTACCTCCTCACCTTAGGCTGGCCCTTGGAGTGACTGGGTTCTGGAGGAGAGAGGCCAGACCTTTTCCCTCTCTACCCCAGGTACAGGCTTTGCTGCTGGGAATGGTCCATGGAGAGATGGCCCGGAACACTCATCCTGGACAGAACCAGAACACAGCCACAGAACAGAACCTGTGGATGAAGCTTCGCCTGCGGCCAGGAGACAGGCGGGGTTTCGATGTGGGCGTGGCTCATTCCCTCAGCCAATGGCAGGCCTGCCTGTGGAGTGTACTCAGTCTGAACCAGCTACTGTGTCTGCCCCTGCCTGAACCAGACACAGCATGGTTATTCAGTGGTAGTCTGGTCCATGGTTTGGTTGGCCGTCTGAGAGGGGGTTGTTCTCCTGAATCTGTTCTGGCTGCAGCTCCTCTCTCTGGGCATATCTACCGCTCCCTACTGGCTGCTCTGGAGGACTGCATGCTAAATACACTACCCTcatcagggaggaggaagagggggagaggaggagaaaaaggaggagCCCCTTCCTCCCAGGAGATCAACAACAGGTTTGCTCTGCTGATgactgaggaagaggatgaagagtgAGAGTGAGGAGACTGTAGGTTCTTTCTAGTCAACGTGGTGCTCATAAATAAACGTTGTTCCTTTTTTCACAGCTTAGAAAGAGAGGAGTGGGATGAAAAGAAAGAGATGGCCTGTGGTACACTATTTTAGGAAGCATTAATCCATGATTTAAACCCACTCAGGCGTTTCAATGACGATTCTAAATGAttaacagttctatttctgatgaAACTCTTCCTTTTAATTAGGACGTATACATATGGCCTTCATGAGGCCTTTACAGCAGCTGATGTCACCTTGTCAGCATATGAGTCTACACAAAACATTGAGCCTTTAAACTGTTTTTAATTAAAATGTGTAAACTCAATGATGTGCATATTGTTCTTATCATTAGTCTCAATGTCCACATAGCAACCTAACTATTAGTAACCAAATAAAAACATGTTCAGTT

Function

symbol description
aste1 Predicted to enable nuclease activity. Predicted to be involved in nucleic acid phosphodiester bond hydrolysis.

NR:

description
protein asteroid homolog 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572483.2 False 2745 mRNA 0.54 8 53663547 53670460
XM_021572482.2 True 2792 mRNA 0.54 8 53663547 53670502

Neighbor

gene id symbol gene type direction distance location
si:ch73-345f18.3 LOC106588788 coding downstream 8071 53652973 ~ 53655476 (-)
fam126a LOC106588800 coding downstream 13708 53628866 ~ 53649839 (-)
tomm7 NA coding downstream 35104 53621900 ~ 53628443 (-)
LOC110496523 LOC106588797 coding downstream 66401 53539731 ~ 53597146 (-)
LOC110496522 LOC106588796 coding downstream 125768 53531922 ~ 53537779 (-)
LOC110496534 NA coding upstream 33260 53703762 ~ 53705633 (-)
LOC110496535 NA coding upstream 67840 53738342 ~ 53741052 (-)
LOC118941188 NA coding upstream 73885 53744387 ~ 53747035 (-)
mrpl3 mrpl3 coding upstream 216635 53887137 ~ 53895002 (-)
cpne4b cpne4 coding upstream 231746 53902248 ~ 53915395 (-)
G1562682 NA non-coding downstream 151652 53510167 ~ 53511895 (-)
G1562701 NA non-coding downstream 172116 53490200 ~ 53491431 (-)
G1562624 NA non-coding downstream 269071 53353741 ~ 53394476 (-)
G1562623 NA non-coding downstream 323917 53331774 ~ 53339630 (-)
G1562729 NA non-coding upstream 32590 53703092 ~ 53730527 (-)
G1562730 NA non-coding upstream 63668 53734170 ~ 53743453 (-)
G1562762 NA other downstream 60853 53598650 ~ 53602694 (-)
G1561279 NA other downstream 1015770 52644989 ~ 52647777 (-)
LOC110496491 LOC106588724 other downstream 1306237 52352725 ~ 52396978 (-)
G1561167 NA other downstream 1413058 52249354 ~ 52250489 (-)
G1562816 LOC100136012 other upstream 81904 53752406 ~ 53752683 (-)
G1562828 NA other upstream 203908 53874410 ~ 53875592 (-)
LOC110496860 LOC106588819 other upstream 968365 54636849 ~ 54652932 (-)
G1563253 NA other upstream 990124 54660626 ~ 54665643 (-)

Expression


Co-expression Network