dync1li1 (LOC106588808)


Basic Information

Item Value
gene id dync1li1
gene name LOC106588808
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 53916292 ~ 53928304 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572496.2
ACCACGCCCAGTACTGTGCGTTACATCCGGGTCTTTGTTGGTTGGCAGCAGTGAAGATGGCGGCGTCAGGGAGGAGTACATTATTATCCTCCAACAACAGTGGACTAAACAGCACAGCCGAACAACCAAATACTGAAGACGAAGATGGACAGGATTTATGGTCTGCTATTCTGAGCGAAGTATCGACTCACTCCAGATCTAAACTACCGTCCGGGAAAAATGTGCTGGTCATGGgggaagTGGGTTCGGGGAAGACCACTCTGGTTGCTAAACTACAGGGTGTGGAGGACTTCCTGAAGGGGCGTGGCCTGGAATACCTCTACTTCAGTGTCCATGACGACGACATTGACGacCAAACCAGGTGTAATGCCTGGGTGTTAGATGGGGATCTGTACCATAAAGGTCTGCAGTCTGTTGCTGTGCAACGAGAGGCGCTTGGTGACTCGTTGCTATTGGTTACTGTGGACCTGTCGCGGCCGTGGGTCGCCATGGAATCGCTTCAGAAGTGGGCGGCTGTCGCTAGGGAACATATCGACAAGCTCCGGGTCCCCCCAGAAACACTGAGGGAGCTGGAGAACAGAAtggccAGACAGTTCCAGGAGTATGTGGatcctggctgggaggagagcGCCCCccagaggaggagtgaggaggaggagaacgttctgctgccgcTCGGcgaaaacacactcacacacaacctgGGACTACCCATGGTGGTGGTCTGCACTAAGtgcgATGCCATCAGTACGTTGGAGAAGGAGTATGACTACAAAGACGAACACCTGGACTTCATTCAGTCATACATCAGACGCTTCTGTCTACAGTACGGGGCGTCTCTGCTGTATACGTCGGTTAAGGAAATGAAGAATGTGGATGTTCTGTATAAATACCTGGTTCACAGACTCTACGGTTTCCCCTTCCACTACCCTGCTCAACTGGTGGAGAAAGACACAGTCTTCatTCCGTCAGGGTGGGATAATGAAAATAAGATATCTATCCTCCATGAGAACTTCCAAACGCTGAAACTAGACGACATCTTTGAGGAGGTCATCGTCAAACCGCCTGTCAGAAAGTTTGTTCATGAGAAGGAGATTCAGGCTGAAGATGACCAGGTGTTTCTGCTCAAGCTGCAGTCGCTGCTCTCCAAACAGCCTCCTGCATCTGCCGGACGACCAGGGgagtCCAGCAGTAGTAGAGGTCCCAGTGGTTCTCCCAGGACCAGTAATCGTTCAGCTGCAGCCAACGTTGCTAACACCATGCCCCAATCAGCAGGTCAGACCAGTGAGGGGGTGCTGGCTAACTTCTTCAACAGTCTTCTGACCAAGAAGGCCGGAGCATCGCCACCGGGCAACAGCACACCAGGGACTGTTCGCAAGtcaggttcTAAGCTGGGTCTGAGTGATGTCCAGGCAGAGTTGGACAGGATCAGCTGCAGAGAGAATGATGAGACCAACAACAGCAACACTAACAACCCTAACCCCAGTACTGAGAACAACGAAGAACAGACATGAACAgaccacctccctcttcctcccccctacCTCACCCCCCCAGACCATACGTGAAGAGAACAAACCTCACCCTCCACCCCCCCAGACATACCCCAGACCAGACCACATGAAAAACCCACCTCCCCTACCTTACCCCCTCCTCACACCCCCAGGCCATACATGAAGAGACCAGACCTCACCCTCCTCCCATTCTCACGTCTCCTGacctcccctcctcaccccccaGTGAGACCACCACATACCAGACATGAAGACACGTCAGCCCTACCTCATTCCCCAGACCATACATGGAGACCAGACCTCACCCCAACAGGCCAGAACAGATTAGATATGAAGACCTTCTTCAGGACGGAGAGGtatggggatggagagggagggaggaggaagaagagagagatggagggagagtgggagcaggagggggagagagatggacaggtatggggatagatggagagagggagcagggggagagagggagcaggggggaaaaatatatattcccCTTTCACCAGATGAGGTATTTAGGGTGATCTTGATACTGTAGGATATATTGAAGGATTTATGTATATAGTTGACTGAGATACTGtaggaattgtgtgtgtgtgtgtgtggagaatgGAGAATGTTAGACAGAGCCATGTAAAGAGAGAGTTTGGCCCTTGAGGTTTCAACCAAAAAGCAGCAATCTTCTGAGATGTCACATAACTCTATGGCAGACATATTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAGGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTATTAGAACTATAACAAAGTCCttatggatggatgaatggaaggTTCATCCACTGTGGCAGGCAACAACATGGCTTCCGGCCGGCTCTGAAGTGGGCCAAACTCTCTGTGACTGCTTTTAGATGTAGATATAGATGGGGAGGGGGTGTAGTTGAGCTTTATTTGTACAGTTAGGAGAAGCACTAATGGTTTATAACCCAATAGTTAAtacaaggagggagggatggccgGGGGCACCTGGAAAGTGTACAGTCCCTTTGTCTTGCTGTAATCTGATTGGTCCGTTATTTCAGAACTGTAACCTGATTGGTATGTTATTTAATTGTTCTGTGGTGGCATTTGTATCATCAGGTCTATAATGAGTCAAATAAAGGTGTATTTATTCTGAC
>XM_021572497.2
ACCACGCCCAGTACTGTGCGTTACATCCGGGTCTTTGTTGGTTGGCAGCAGTGAAGATGGCGGCGTCAGGGAGGAGTACATTATTATCCTCCAACAACAGTGGACTAAACAGCACAGCCGAACAACCAAATACTGAAGACGAAGATGGACAGGATTTATGGTCTGCTATTCTGAGCGAAGTATCGACTCACTCCAGATCTAAACTACCGTCCGGGAAAAATGTGCTGGTCATGGgggaagTGGGTTCGGGGAAGACCACTCTGGTTGCTAAACTACAGGGTGTGGAGGACTTCCTGAAGGGGCGTGGCCTGGAATACCTCTACTTCAGTGTCCATGACGACGACATTGACGacCAAACCAGGTGTAATGCCTGGGTGTTAGATGGGGATCTGTACCATAAAGGTCTGCAGTCTGTTGCTGTGCAACGAGAGGCGCTTGGTGACTCGTTGCTATTGGTTACTGTGGACCTGTCGCGGCCGTGGGTCGCCATGGAATCGCTTCAGAAGTGGGCGGCTGTCGCTAGGGAACATATCGACAAGCTCCGGGTCCCCCCAGAAACACTGAGGGAGCTGGAGAACAGAAtggccAGACAGTTCCAGGAGTATGTGGatcctggctgggaggagagcGCCCCccagaggaggagtgaggaggaggagaacgttctgctgccgcTCGGcgaaaacacactcacacacaacctgGGACTACCCATGGTGGTGGTCTGCACTAAGtgcgATGCCATCAGTACGTTGGAGAAGGAGTATGACTACAAAGACGAACACCTGGACTTCATTCAGTCATACATCAGACGCTTCTGTCTACAGTACGGGGCGTCTCTGCTGTATACGTCGGTTAAGGAAATGAAGAATGTGGATGTTCTGTATAAATACCTGGTTCACAGACTCTACGGTTTCCCCTTCCACTACCCTGCTCAACTGGTGGAGAAAGACACAGTCTTCatTCCGTCAGGGTGGGATAATGAAAATAAGATATCTATCCTCCATGAGAACTTCCAAACGCTGAAACTAGACGACATCTTTGAGGAGGTCATCGTCAAACCGCCTGTCAGAAAGTTTGTTCATGAGAAGGAGATTCAGGCTGAAGATGACCAGGTGTTTCTGCTCAAGCTGCAGTCGCTGCTCTCCAAACAGCCTCCTGCATCTGCCGGACGACCAGGGgagtCCAGCAGTAGTAGAGGTCCCAGTGGTTCTCCCAGGACCAGTAATCGTTCAGCTGCAGCCAACGTTGCTAACACCATGCCCCAATCAGGTCAGACCAGTGAGGGGGTGCTGGCTAACTTCTTCAACAGTCTTCTGACCAAGAAGGCCGGAGCATCGCCACCGGGCAACAGCACACCAGGGACTGTTCGCAAGtcaggttcTAAGCTGGGTCTGAGTGATGTCCAGGCAGAGTTGGACAGGATCAGCTGCAGAGAGAATGATGAGACCAACAACAGCAACACTAACAACCCTAACCCCAGTACTGAGAACAACGAAGAACAGACATGAACAgaccacctccctcttcctcccccctacCTCACCCCCCCAGACCATACGTGAAGAGAACAAACCTCACCCTCCACCCCCCCAGACATACCCCAGACCAGACCACATGAAAAACCCACCTCCCCTACCTTACCCCCTCCTCACACCCCCAGGCCATACATGAAGAGACCAGACCTCACCCTCCTCCCATTCTCACGTCTCCTGacctcccctcctcaccccccaGTGAGACCACCACATACCAGACATGAAGACACGTCAGCCCTACCTCATTCCCCAGACCATACATGGAGACCAGACCTCACCCCAACAGGCCAGAACAGATTAGATATGAAGACCTTCTTCAGGACGGAGAGGtatggggatggagagggagggaggaggaagaagagagagatggagggagagtgggagcaggagggggagagagatggacaggtatggggatagatggagagagggagcagggggagagagggagcaggggggaaaaatatatattcccCTTTCACCAGATGAGGTATTTAGGGTGATCTTGATACTGTAGGATATATTGAAGGATTTATGTATATAGTTGACTGAGATACTGtaggaattgtgtgtgtgtgtgtgtggagaatgGAGAATGTTAGACAGAGCCATGTAAAGAGAGAGTTTGGCCCTTGAGGTTTCAACCAAAAAGCAGCAATCTTCTGAGATGTCACATAACTCTATGGCAGACATATTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAGGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTATTAGAACTATAACAAAGTCCttatggatggatgaatggaaggTTCATCCACTGTGGCAGGCAACAACATGGCTTCCGGCCGGCTCTGAAGTGGGCCAAACTCTCTGTGACTGCTTTTAGATGTAGATATAGATGGGGAGGGGGTGTAGTTGAGCTTTATTTGTACAGTTAGGAGAAGCACTAATGGTTTATAACCCAATAGTTAAtacaaggagggagggatggccgGGGGCACCTGGAAAGTGTACAGTCCCTTTGTCTTGCTGTAATCTGATTGGTCCGTTATTTCAGAACTGTAACCTGATTGGTATGTTATTTAATTGTTCTGTGGTGGCATTTGTATCATCAGGTCTATAATGAGTCAAATAAAGGTGTATTTATTCTGAC
>TU1786900
ACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTATTAGAACTATAACAAAGTCCttatggatggatgaatggaaggTTCATCCACTGTGGCAGGCAACAACATGGCTTCCGGCCGGCTCTGAAGTGGGCCAAACTCTCTGTGACTGCTTTTAGATGTAGATATAGATGGGGAGGGGGTGTAGTTGAGCTTTATTTGTACAGTTAGGAGAAGCACTAATGGTTTATAACCCAATAGTTAAtacaaggagggagggatggccgGGGGCACCTGGAAAGTGTACAGTCCCTTTGTCTTGCTGTAATCTGATTGGTCCGTTATTTCAGAACTGTAACCTGATTGGTATGTTATTTAATTGTTCTGTGGTGGCATTTGTATCATCAGGTCTATAATGAGTCAAATAAAGGTGTATTTATTCTGA
>TU1786905
ACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTTCACTAGTATAACTGACAGAATCATAAACCAAGTATTAGAACTATAACAAAGTCCttatggatggatgaatggaaggTTCATCCACTGTGGCAGGCAACAACATGGCTTCCGGCCGGCTCTGAAGTGGGCCAAACTCTCTGTGACTGCTTTTAGATGTAGATATAGATGGGGAGGGGGTGTAGTTGAGCTTTATTTGTACAGTTAGGAGAAGCACTAATGGTTTATAACCCAATAGTTAAtacaaggagggagggatggccgGGGGCACCTGGAAAGTGTACAGTCCCTTTGTCTTGCTGTAATCTGATTGGTCCGTTATTTCAGAACTGTAACCTGATTGGTATGTTATTTAATTGTTCTGTGGTGGCATTTGTATCATCAGGTCTATAATGAGTCAAATAAAGGTGTATTTATTCTGACTGTCTGTCTTTTCCTAAACCCGTGTTTGTATTTCAACAGGTGTGAGTTtgccaattttttttaaatcaagaaaAATATTTTGTAAGTAAGAACATTTCAGGTCTTTCATTTACATGATTTGTG

Function

NR:

description
PREDICTED: cytoplasmic dynein 1 light intermediate chain 1 isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0007018 microtubule-based movement biological_process
GO:0005868 cytoplasmic dynein complex cellular_component
GO:0003777 microtubule motor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572496.2 False 3327 mRNA 0.47 13 53916292 53928181
XM_021572497.2 False 3324 mRNA 0.47 13 53916292 53928181
TU1786900 False 461 lncRNA 0.41 1 53927720 53928180
TU1786905 True 585 lncRNA 0.39 1 53927720 53928304

Neighbor

gene id symbol gene type direction distance location
LOC110519664 LOC106588805 coding upstream 33800 53812083 ~ 53882492 (+)
LOC110514975 LOC106588804 coding upstream 185876 53713836 ~ 53730416 (+)
LOC110496530 LOC106588804 coding upstream 212982 53675493 ~ 53703310 (+)
klhl7 klhl7 coding upstream 252739 53656226 ~ 53663553 (+)
LOC110496949 LOC106588787 coding upstream 294902 53618822 ~ 53621390 (+)
LOC110496857 LOC106588809 coding downstream 55456 53983637 ~ 54008038 (+)
gmpr gmpr coding downstream 94101 54022282 ~ 54036714 (+)
LOC118940998 NA coding downstream 326712 54254893 ~ 54258383 (+)
LOC110496546 LOC106588814 coding downstream 394636 54322817 ~ 54409921 (+)
LOC110496545 LOC106588816 coding downstream 484589 54412770 ~ 54510923 (+)
G1561891 NA non-coding upstream 729 53915148 ~ 53915563 (+)
G1561864 NA non-coding upstream 3572 53912243 ~ 53912720 (+)
G1561843 mrpl3 non-coding upstream 21344 53887139 ~ 53894948 (+)
G1561853 NA non-coding upstream 47886 53855267 ~ 53868406 (+)
G1561851 NA non-coding upstream 112568 53769857 ~ 53803724 (+)
G1561943 LOC106588811 non-coding downstream 115891 54044072 ~ 54053417 (+)
G1561956 NA non-coding downstream 156687 54084868 ~ 54097923 (+)
G1561987 NA non-coding downstream 190290 54118471 ~ 54118930 (+)
G1561989 NA non-coding downstream 193550 54121731 ~ 54144598 (+)
G1561990 NA non-coding downstream 194170 54122351 ~ 54165287 (+)
G1561856 NA other upstream 39362 53872173 ~ 53876930 (+)
G1561845 NA other upstream 75421 53817164 ~ 53840871 (+)
G1561544 LOC106588750 other upstream 627827 53277790 ~ 53288465 (+)
snrpd1 snrpd1 other upstream 737355 53175661 ~ 53178938 (+)
G1563547 NA other downstream 1210467 55138648 ~ 55139231 (+)
G1564470 NA other downstream 1980069 55908085 ~ 55908934 (+)
LOC110496862 LOC106588838 other downstream 2100757 56028870 ~ 56504444 (+)
G1564638 LOC106607612 other downstream 2122407 56050588 ~ 56051793 (+)
G1561849 NA non-coding upstream 130877 53789231 ~ 53796843 (+)

Expression


Co-expression Network