LOC110496862 (LOC106588838)


Basic Information

Item Value
gene id LOC110496862
gene name LOC106588838
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 56028870 ~ 56504444 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953306.1
ccgCGCATCTCCGTTCTCCGCTGCTGAAGCGACTGCGGGGAACCAGATGCCCTACTGTGAGCCGCTGCCTGTGGATATCGCGGATGCCAGAGCAGAATAGACCTAGTCGAGAGACAGACCCATTCACACTCAGCCAAAGCGAATAAAGAAGAGGGGTAGTgggagagataaggagaggtGGTTTTACGCGTTGTCAGTGTGGTTTTCAGCTTCGGAAAAAGAGCTACTGTAAGAAGAGGAGGACTCGCAATATTGGGCACTAGAATAAGAAAAAAAACGCGTTATCCCGTTCTGCTGCTGCTGCGGCTCGTGAGCGCATTCTCTGCTCGGTTTGGAATACAATGTGTCTGCATGAGACCATGGAGATACGGAGTGGATTTATCAAAGAGCACTTCGACAGTTTATGAACAAAACTGGACCTCTCTTTTTCTACGGCATTTTGTCCCCCTTTTTCGTTGGgattgtgttttgtttttgtgtattttttcCGTTTGCATATTTTCGTTTGATTTATGGTGTTTTATGATTTCatgtcatattttttttattttttaactattTCGGTTTTTACTTTTCATCGGTTTTGGAGGAGAGCTGGATTGACTCGTCGTGAAGATTTGTGTAGAGAAGATTCCCCGTCGCTCATGTGAATGATATTCTATCTCCCCAACTGAGACGTGCCATGGATGGAAAACTTAATTTGCATCAACGAAACCGATCGGGAAATATCCGTTACATCGAATAACTACTGCTAACAGCAATCAGGACGAATGACATAGGATGAACACTACTGgcggggtgtgtctgtgtgtgctgtcgTCCCTCCTCGGTGTGGCCTGGGCCGTGGCTGCTCTAGTCCCTCTAGATCTAGCTCCTCTTTCTACCCTGGCCGCTGCCTATGGGGCTGCCAGTGGAGGCTCTCCCAGGGAGGCAGAGGGGGGCAGCCTCCCCTCCCAGTGTTCCAGCCTGGTAGCAGGGGTACTGTATGGATCTTTCTCTCTGAGAGAGCTGTTCCCGTCCCGGGTGCCGGGCTGTTCCTGGTCGTTGGAGAACCCCGATCCCACCAAGTATTCCCTCTATCTCCGATTCACCCGTCACCCCTCCATCTGTCAATCACACTCCCCCATGCTCCTCCCACTCGACCATCATCTAGCCAATCAGAGCTGCCCGCTGGATCTACAGACATCAACTCAGGACGTGATAGACCTTTGCGGCAGCCAATTAGAATCGGAAGGACCATATTCATTTTTACAGTTCGACAAGAACTTTGTTGAGCTATGCCTGTCGAGACTACCGTCACCTGATGAACCGCCGGTAACCAAGGAAACGCTAGAACTCCGGCTAGTCGAGGTTTTGCTAATCAACAATGAGAACTCCAGCCAGTTCACCTGTGGAGTACTCTGCCGATGGTTTGAGGAGTGCCTGCGCAATGGTCGTCATGGAGACGGTGACGCTGCTGACGGTGACGGTTGCAGAGTTACTCAGACGGGGTGTGTGTGTCCTAACAACAATGTGGTCATGGCTCAGCCTGTACCCCTTCTCCCGTCAACGCCCCATAACAACGGATCGCTGTTACCTGACGATTGCTGCGTCACAGAGCTGCACCATAACAATGCCATTGCCATAGCCCCCAGGGACGTCAGACAAGatCCCTACTCAGACTCAGATGATGATGACCTGAAGGTGAAGACGCAGAGACCCAGATCAGCAGACCAGCCAGGTGTGTTTCAGGCACAGACAGgtgaccCTGCGGCGGAGGAGTGGTCTCAATGGAGTGTGTGTTCGTTAACATGTGGTCAGGGTTGGCAGGTGAGGACGCGCTCGTGTGTGTCCTCTCCCTACGGCACCCTGTGTAGTGGCGCCCTGAGAGAGACACGTATGTGTAACAATACCGCCACCTGCCCCGGTGACCCAGCACTGAGCTCAGTCCATGGGCTGTGGGAGGAGTGGTCGTCATGGAGCCTTTGTTCTGTCACGTGTGGGCGGGGCTCCAGGACCCGAACCAGGAACTGTGTGAGCGGAGGAGAGGCCAAGCTCTGTGGAGGGCCTGAGAAACAGACCAAACTCTGCAACATAGCAGTGTGTCCCGtggAGGGCCAGTGGTTGGACTGGGCTCCGTGGTCTAGGTGCAGTGCAACCTGTTCCACAGGGAGCCAGCAGAGACAGAGGAGGTGTAGTGCATCGGTGCACGTCTGGGCAGAGTGTAAGGGACCACACCAGGAGACCAGGGAGTGTACCAACCCATCCTGCGGTGgTGGGGGTAACTGGGGCAGCTGGAACCACTGGAGTCTGTGCAGTAAGACGTGTGACTCAGGGTGGCAGCGTCGCTTCCGGATGTGTGAGGGGACAGGGATACAGGGTTACCCCTGTGACGGCTCCGGAGAGGAGGTCCGTTCCTGCAATGACAAGAAGTGCCccgcaccTCATGAGATCTGTAGAGACGAGTACCTTGTAGCCATGACCTGGAAAAGTGCCTCGGCTGGAGAAACAGTCTACAACAAGTGTCCGACTAACGCCACTGgATCTGCAAGTCGTCGTTGCTTGCTGGATGCTAATGGAGTTGCTTACTGGGGTCCTCCGAGCTTCGCCAGATGCGTCTCGATGGAATTCAGATATTTACATTTATCTTTGCGAGAGCATCTTGCGAAGGGTCAGAGGACCCTGGCTGGAGAGGGCATGTCTCAGGTCGTGAGGAATCTCCTGGAGCTCTTACAGAGGAGGAGCTACTACAGCGGTGACCTCCTGTTCTCCACGGAGATTCTCCGAAATGTGACGGACACCTTCAAGAGAGCAACCTACATCCCAGTACCCGACGACGCTCAGAAATTCTTCCAGGTAGTCAGCTATATGTTGGACATGGAAAATCTAGTGAAATGGGAAGACGCTCACCAGGTTTCTCCTGGTGCGGCCCATCTCATGCGTATATTGGAGGACTTCATCCATCTGATAGGAGATGATCAGAAACCCTTCCAGAGTTTCCTGGTGGTCACCAACAACCTCATGATAACAATACAGCGAGAGCCTGTGACAGCGGTGTCCAGTGACATCAACTTCCCCATGAAGGGTAGGAGGGGCATGAAGGACTGGGCTCGATCTGCTGAAGACAAACTCTACATCCCCAAAGAAGTCTTCACCCTCACCTCCGATGaaacagaaacagagacttCATATTTTGTCATCGGAGCCATTCTGTATCGGACCTTAGGAGTCATCCTACCTGCCCCCAAtgCCCCTGCTGTGATCAACTCGAAGATTCTGACGGTGACGGTCCGACCAGAACCCAAACCCAGTGAACCCATGGTAGTGGTGGAGCTGTCCCCACTGCTCAATGGCACATCAGATCCTCAGTGTGTTGTCTGGGACTATGGGAACCCggAAGCTGGCGCTAAGAACTGGGACACCGAGGGCTGCCAAACACTCACGTCTGCCGCCGTCCACACTAAATGCCTGTGCAGCAGGATCTCAACCTACGCTGTGCTAGCGCAACAAGCTAAAGACCCGgaAATGGGTCCGTCCAGTATGCCCTCTGTACCCCTCATGGTGGGCTGTGGGGTCTCCTGCAGTGCTCTGCTTATCCTGTTGCTCATCTATGCTGCCTTCTGGAGgTATATCCGTTCCGAGAGGTCTATCATCTTGGTCAATTTTTGTCTCTCCATCCTGGCCTCCAACATCTTGATACTGGTTGGACAGTCCCAGACACTCAGCAAGGGCCTGTGTACTGTGACTGCTGCTTTCCTTCATTTCTTCTTCTTGGCATCGTTCTGCTGGGTACTGACAGAGGCGTGGCAGTCTTACCTGGCTGTGATTGGCAAGATGAGGACACGCCTCATACGCAAACGCTTCCTGTGCCTGGGCTggggtCTCCCAGCCCTGGTGGTTGCTGTGTCAGTAGGTTTCACTAGAGCCAGAGGTTACGGTACACCCAGCTATTGTTGGCTGTCCTTGGAAGGCGGGCTTCTCTATGCCTTTGTCGGTCCTGCAGCCGTCATCGTATTGgtGAACATGCTGATTGGCATTGTGGTCTTCAACAAGCTCATGTCTCGAGATGGCATCTCGGACAAGTCTAAAAAGCAAAGAGCTGGggCATCCCTGTGGAGTTCCTGTGTAGTTCTCCCTCTGCTGGCTCTGACTTGGATGTCTGCTGTGTTGGCCATTACCGACCGCCGCTCCACACTGTTCCAGGTGCTGTTTGCTGTCTTTGACTCTGTCCAGGGCTTCGTCATCATTACTGTGCACTGTGTCATGCGCCGcgaggTCCAGGACGCAGTGCGCTGTCGGATGGGGGGATGTAAAGATGACAGTGAGAACTCACCGGACTCATGCAAGAACGGACAGGTGCAGATCATGACGGACTTTGAAAAAGATGTGGACCTGGCGTGTCAAACagAAAGAGGACACCCATTCATCTTCAAGGAGGTGAACACCTGTAACCCGGCAACCATCACCGGAACCCTCTCCCGAATCTCCCTTGATGAAGAGGACGACCCTAAACTGGCGACCCACCAGGAGGGGGGTTTAGGGGTCAACTTCAGCTCCCTCCCTGGAAACATCCCCCCTCCTAACCTACTCGTTCAGGTGCCCCCGCTGGGTGTTCTGAATGAGCTGAGTGACACCCCTGTGAAGAAGGAGGTGAACATGGAGCAGAAGAGGCAGCATGGGAACCCCAGGAACACAGTGCCTGTATACCTCTGCACCGATAGCGGGCTGGGCTGGTCTCGACCGCCTCCCCCTCACAATACCCAGGATGGAACTAgcggggaaggggagggggactATATGGTGTTACCCCGTAGGACGGTCAGTCTAAAACCCCCTCCGCCCccggggctggggctggggggcGAGGACAAGCCCCTGAACATCGCGGTGGACGACCCGCCtttccccccacccccctcgCCCATGACCCTCCACCCGGCGGAGAGCGAGGCCTACCCAGCCGACTTCATCTCACCCGGCGACCACAACATGAATATCGCAATGAACATGAACCGCTCCTACGGGACGCTCAAGCAGCTCCCCATGCACGGGGGTCACGGACCCCAGGGCCACATGCACGTTCCTGGCAGCCACGTGCACGGCCATGGGCAATCACTGCAGCTGAAGCAGGGCCAGAGGCCGTCGGTGAGACAGATACTAACAGGAGGGGGAGGCACCCGGACCCTACCACGCAACCTTGGCAGTACCAACGCTAATGCCAGCCTCTCTGCTGGCTCcctggagaGGAAAAGAGTACGGTACTCTGAGCTGGACTTTGAGAAAGTGATGCACACTCGCAAACGACACTCTGAGCTGTACCATGAGCTCAACCACCCCACCACCAAGTTCCACACCATAGACAGGTATAACAGGGACCCCGCCATGTCCACCTTCAAGAGGGAAAAGCGATGGAGCATTTCGTCTGCCGGAGGTGAAAAGAACTCTTCGAGTGACAAGTCGACTCCGACCCAAGATGACCAGCACTCCTGGGACAGCTTCAAGACCATGACCCCTGAGCTGTCCATTGTGCCGGGGGAGCAGAAGGACAGGATGGAGCTGCACAACAAGACCACCTGGGACTCCTCGTCTGCCAACACACCTGACACGTCCGAGGGGGATTTCCAGACTGAAGTGTGATGaggcagagaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacactctcactcacacacacacacacacacacacacacactcacactcacactcacactcacactcacactcacacacacacacacacacacacacacactcacactcacactcacactcacactcacactcacaaagTTTCAAGCGTAGACTAACAGGTAGCCACATGTAcatacatagacagacacacagcactcCTCCAAACCGCTCTTCACATCCTAAAATCTGCTCTCTAAAGGATGATATCATTTGTTTACTGCTAATGTGGACAAGGACAAAGCAAAGACAACTGTTCTCTTCTATATTTTCAAACAGACTTTAAATGAGAGAACAGGGCTTGAAAGAGACGGACTGAGAAACTGAGAaatttttaaatggacaaaaaaacaaacaaaactttcTGAAAAATGTCTTGGTTTTATTCACTGGAAAAAAGGATTCTCTTTCACCTgtttgatgatttgaaaaaaaaatgaatatttcTGCACCGTTCTGTTCTTTTTATAGAGAAGAAATCTCACTGATGTTTGGCACACTGTTAAACCCCTTAGGCTCCctctcttcatttctctccttctttcccttcTAATGGATGACGCAAGCACTCGttttttcttctgtttttttGGAGGGGTTGGGGAGGGGCAAGTAGGGAGTAAGAACGGATCATTGACATGTGACCTCTGCTTTTGCCAAGTCTCACACTCTTCTCTCGTCATCCTTTTTCAATGTCTTGTTTTTTCCtttttatattgttatgattTTAGTTATGATGTCCCTTCTCTATGGTTCAATTTTTTTTTAGCAACAAAAACAATTTGTGACAAAACAACCTTCAACTGAGTTTGTTGTTGTCTCATTGTCTATCTCTTATATGAAAGTCCTCTTTTATTTTGAGTTTCCGTTCGTGCTTGTGCTGCCTTTTCCATGCTGAATTTTAAAGAGTGATTTATTACCCA
>TU1790095
CTGTGGATATCGCGGATGCCAGAGCAGAATAGACCTAGTCGAGAGACAGACCCATTCACACTCAGCCAAAGCGAATAAAGAAGAGGGGTAGTgggagagataaggagaggtGGTTTTACGCGTTGTCAGTGTGGTTTTCAGCTTCGGAAAAAGAGCTACTGTAAGAAGAGGAGGACTCGCAATATTGGGCACTAGAATAAGAAAAAAAACGCGTTATCCCGTTCTGCTGCTGCTGCGGCTCGTGAGCGCATTCTCTGCTCGGTTTGGAATACAATGTGTCTGCATGAGACCATGGAGATACGGAGTGGATTTATCAAAGAGCACTTCGACAGTTTATGAACAAAACTGGACCTCTCTTTTTCTACGGCATTTTGTCCCCCTTTTTCGTTGGgattgtgttttgtttttgtgtattttttcCGTTTGCATATTTTCGTTTGATTTATGGTGTTTTATGATTTCatgtcatattttttttattttttaactattTCGGTTTTTACTTTTCATCGGTTTTGGAGGAGAGCTGGATTGACTCGTCGTGAAGATTTGTGTAGAGAAGATTCCCCGTCGCTCATGTGAATGATATTCTATCTCCCCAACTGAGACGTGCCATGGATGGAAAACTTAATTTGCATCAACGAAACCGATCGGGAAATATCCGTTACATCGAATAACTACTGCTAACAGCAATCAGGACGAATGACATAGGATGAACACTACTGgcggggtgtgtctgtgtgtgctgtcgTCCCTCCTCGGTGTGGCCTGGGCCGTGGCTGCTCTAGTCCCTCTAGATCTAGCTCCTCTTTCTACCCTGGCCGCTGCCTATGGGGCTGCCAGTGGAGGCTCTCCCAGGGAGGCAGAGGGGGGCAGCCTCCCCTCCCAGTGTTCCAGCCTGGTAGCAGGGGTACTGTATGGATCTTTCTCTCTGAGAGAGCTGTTCCCGTCCCGGGTGCCGGGCTGTTCCTGGTCGTTGGAGAACCCCGATCCCACCAAGTATTCCCTCTATCTCCGATTCACCCGTCACCCCTCCATCTGTCAATCACACTCCCCCATGCTCCTCCCACTCGACCATCATCTAGCCAATCAGAGCTGCCCGCTGGATCTACAGACATCAACTCAGGACGTGATAGACCTTTGCGGCAGCCAATTAGAATCGGAAGGACCATATTCATTTTTACAGTTCGACAAGAACTTTGTTGAGCTATGCCTGTCGAGACTACCGTCACCTGATGAACCGCCGGTAACCAAGGAAACGC
>TU1790101
gagacatGTCTACCCTGTGGATGTAAATTAACACCCAGTCACGGTTACCTCCCCACTCCACCCTTGCAGAAAGAGGACACCCATGTAAGTCTGGTACCAGCCTGACCCTAATAAAACGGTCAGTCACTAATGGCCCAACCCTAACTTGAGATCTACATCAAACTCCTAACTCAAACTTTCATGCAAATTTTGTAGAACAAAGTAGAATGGTGATGCAGGGATGCATTATGAGGACTTTGCTATTTGAATATAGGCCTTGTTCTATAGAACAACATCTAGAATAGTATTGTACCTGACAAAGGCTATAACCAAATGCGTC
>TU1790089
cacacacacacactcacactcacactcacactcacactcacactcacaaagTTTCAAGCGTAGACTAACAGGTAGCCACATGTAcatacatagacagacacacagcactcCTCCAAACCGCTCTTCACATCCTAAAATCTGCTCTCTAAAGGATGATATCATTTGTTTACTGCTAATGTGGACAAGGACAAAGCAAAGACAACTGTTCTCTTCTATATTTTCAAACAGACTTTAAATGAGAGAACAGGGCTTGAAAGAGACGGACTGAGAAACTGAGAaatttttaaatggacaaaaaaacaaacaaaactttcTGAAAAATGTCTTGGTTTTATTCACTGGAAAAAAGGATTCTCTTTCACCTgtttgatgatttgaaaaaaaaatgaatatttcTGCACCGTTCTGTTCTTTTTATAGAGAAGAAATCTCACTGATGTTTGGCACACTGTTAAACCCCTTAGGCTCCctctcttcatttctctccttctttcccttcTAATGGATGACGCAAGCACTCGttttttcttctgtttttttGGAGGGGTTGGGGAGGGGCAAGTAGGGAGTAAGAACGGATCATTGACATGTGACCTCTGCTTTTGCCAAGTCTCACACTCTTCTCTCGTCATCCTTTTTCAATGTCTTGTTTTTTCCtttttatattgttatgattTTAGTTATGATGTCCCTTCTCTATGGTTCAATTTTTTTTTAGCAACAAAAACAATTTGTGACAAAACAACCTTCAACTGAGTTTGTTGTTGTCTCATTGTCTATCTCTTATATGAAAGTCCTCTTTTATTTTGAGTTTCCGTTCGTGCTTGTGCTGCCTTTTCCATGCTGAATTTTAAAGAGTGATTTATTACCCATCTGTGAAACGTGAGCTTGCTTTCTGAGGCAACATGTTCTTAACGGTACACCTGTGGGAATTGAGCGAAGGGTATCATCCAGATTTACGCACATTTCCATCGCTCTTTTTCCAGTTCAGTAAAAAAAGTATTTCAAAGTCTTGAAACATTTGAATCAATTACAGACATAACCAACCAAAGCTGTCTTTCTGTCAGGAGAGTATAGCCTATCTGAAAGTGTTGCTGTAGTATTTCCCTTCCCTCCATATGGATCCCAGGTCTTGTTATAAGTGTATTTCAATTATTCTTACTCCCACTGCTTTAGGTGCTGTATCGATCACTGTGCCATGCATCTGCTCTCAGCCCCTCAAGAAAACAGGGAAATAAAGTCATCTATAGTTTCATATGCAAGGACCCAAGGTGCTTTTGCTACTCAGCTTGTCCGTAGTTGTCTTGGTTGTGAATGAAAGAAGCAAAACAAGGAATAGGTGGATAGTTAGGATAGCAACTCAACCCAAATGTTCCACTTTGGTCAGAAACGCTGACAGGGCTTTTGTGGAAAATGTAGACAGGTGTGAAATCAAAGTATATCCCCAAACATGTtcattgtatttctctctctctctctctctctgtctcgctctctctctcttcctctttctccctctattatattcttctctctctgtttatctctctcactcgcagtctgtctcactgtttctctcactctcgcATTCCTCACTCCACCATGGATCATTAAATCTTCATGTAACAGTGTAGTCCTTCTATCAGCCTTTCTATCAGTGCACTAAATAggtaatagagtgccatttgggacgcagacaaaTCACTTTTGAGTTGACTATATAAAGTTAACTTTGTTTTCCAAATTGAAAACATCAGACACAAAAAAACACCCACACCTGACTGTTTTAATACTACACTCTCAGAAAAAACACCCACACCTGACTGTTTTaatactacactcttagaaaaaaagatgTCATCTAGAAacttaaagggttcttcggctgtccccttaGGAGGATCATTGAAAAAacatttttggttgcaggtagaatcATTAtgcgttccatgtagaactctttctACAGAGGGTCTACATGGaccccaaaagagttctacctggaaccaaaaaagggttatcctGTGGGGACAGATGAATAACCTTTTTGGAATCTTTTTTCAAAGAGTAAATAGCACCCATCCTCTAATTCACTATACTCTTGACTCGCCACTCCCTTCACTAAGCACTGAGAGTTGGTTAGAGAGATGAGGTGTTTTAAAGGTATACCTCCTGGAGGGCACATCTCCAGGGTTAGTCCTTACACACTCCTTAGCAGATGTGCAATACCTCCCAAGTAGACGAGGGCTGTGGAGACCAGTCTCACTGGTCTCTAGtatatgagagaaagagagagaggagggatgagaaagAGAACAAGCGAGATTGACAGGACAGAATACAATGAGAGAAAAGAGAGTGATATAAAATCAGTGAGAGAAAGAGTTATAGAGTGAGAGTAAGGGAGAGCtaaataggtagagagagagagaactagagatgGAGAGCAGTGGTGAGCTCTAACAGTAATTATCCAGGGGAATGTCCTGACATTTGTCCTGACATTTTCCGAGGCTGCCCTCAAACCATCTGTGTAAAGATCCCTAATGGTACagtgtggaacacacacacagatggcaaGACAAGAGAGCCTGCCTCTCCAACCTTTACCGCTAATCAGCTGATATGCAGCTCTAGCAGGAGCTAGAGacgctgatctaaggtcagttttgcattacCTCTCCCTAATGGTTTGGGTTAGAAATGTGGGCAGggtaaactgatcccagatcattTTCTAATGGCTACTTATCTCTGACTCATCATACAACTGTGAAGGGAACGTTTATGATAGGTACTCACACAGAGGAACGGCTGATGGTATCCTAATCCTTGTTCTGTCCTAATCCTAATACCAAATGCCATTACCAGGTTGATAAATGCCACACTAGAGAGACAGGTAAGTGAGAGAGTGGGGATGCAACTTCCTGAATtgacaaacttctacagatcCTCAAGATCACTAGTGTTTAAATTGGTCCATGATCATGTGACTGTTCCTAAATCTGTTTCATTTCATCAATCAGTGTCCACTTCCTTGGTGATCACCTCTGATCTTTTCTGGGCTACCAGAAAACCCATCTGATTAATACAGAAGAGAACTTCTCTAACTCTAAAACGATGTGTTGTGTTAGTTTGTTTGTCATGGGCTTTTGAAAGTTTCAGACTATGACTATACAATCTGTCAACGAGAACTTCAATCATTAAACTTCAAAACAGTGAATCCTGTAAAGATTTAGTGAATTGCACAGATGAGGTATTGAAAGCAGTATGTTTGAAAATTATCTTCAGAGTGTGTGGTTTGGTGCAAGAATATGATACATTTGCTAAACTCTAGATAAATGAGAGGAAGAGAAACATAAACTCTGATCTTGGACTACAGAGGTTACCCTCCAACCTACCATGCTTGAGATGTTGACCTAGCTTCTCATACAACCATCAACGCTCTCCCACTGGTGTTACAAAAGAAAGTCCCTCCTTCCTTTTCCTCCCACATTCATGTTTTTTTATACATAAGACTGTACAAAGTAGTCCTCTGTTTTCATAGAGTGTCTTTTTTATATGAAAATAAATTTTCAAATTGATTCAAGT
>TU1790091
cacacacacacactcacactcacactcacactcacactcacactcacaaagTTTCAAGCGTAGACTAACAGGTAGCCACATGTAcatacatagacagacacacagcactcCTCCAAACCGCTCTTCACATCCTAAAATCTGCTCTCTAAAGGATGATATCATTTGTTTACTGCTAATGTGGACAAGGACAAAGCAAAGACAACTGTTCTCTTCTATATTTTCAAACAGACTTTAAATGAGAGAACAGGGCTTGAAAGAGACGGACTGAGAAACTGAGAaatttttaaatggacaaaaaaacaaacaaaactttcTGAAAAATGTCTTGGTTTTATTCACTGGAAAAAAGGATTCTCTTTCACCTgtttgatgatttgaaaaaaaaatgaatatttcTGCACCGTTCTGTTCTTTTTATAGAGAAGAAATCTCACTGATGTTTGGCACACTGTTAAACCCCTTAGGCTCCctctcttcatttctctccttctttcccttcTAATGGATGACGCAAGCACTCGttttttcttctgtttttttGGAGGGGTTGGGGAGGGGCAAGTAGGGAGTAAGAACGGATCATTGACATGTGACCTCTGCTTTTGCCAAGTCTCACACTCTTCTCTCGTCATCCTTTTTCAATGTCTTGTTTTTTCCtttttatattgttatgattTTAGTTATGATGTCCCTTCTCTATGGTTCAATTTTTTTTTAGCAACAAAAACAATTTGTGACAAAACAACCTTCAACTGAGTTTGTTGTTGTCTCATTGTCTATCTCTTATATGAAAGTCCTCTTTTATTTTGAGTTTCCGTTCGTGCTTGTGCTGCCTTTTCCATGCTGAATTTTAAAGAGTGATTTATTACCCATCTGTGAAACGTGAGCTTGCTTTCTGAGGCAACATGTTCTTAACGGTACACCTGTGGGAATTGAGCGAAGGGTATCATCCAGATTTACGCACATTTCCATCGCTCTTTTTCCAGTTCAGTAAAAAAAGTATTTCAAAGTCTTGAAACATTTGAATCAATTACAGACATAACCAACCAAAGCTGTCTTTCTGTCAGGAGAGTATAGCCTATCTGAAAGTGTTGCTGTAGTATTTCCCTTCCCTCCATATGGATCCCAGGTCTTGTTATAAGTGTATTTCAATTATTCTTACTCCCACTGCTTTAGGTGCTGTATCGATCACTGTGCCATGCATCTGCTCTCAGCCCCTCAAGAAAACAGGGAAATAAAGTCATCTATAGTTTCATATGCAAGGACCCAAGGTGCTTTTGCTACTCAGCTTGTCCGTAGTTGTCTTGGTTGTGAATGAAAGAAGCAAAACAAGGAATAGGTGGATAGTTAGGATAGCAACTCAACCCAAATGTTCCACTTTGGTCAGAAACGCTGACAGGGCTTTTGTGGAAAATGTAGACAGGTGTGAAATCAAAGTATATCCCCAAACATGTtcattgtatttctctctctcttcctctttctccctctattatattcttctctctctgtttatctctctcactcgcagtctgtctcactgtttctctcactctcgcATTCCTCACTCCACCATGGATCATTAAATCTTCATGTAACAGTGTAGTCCTTCTATCAGCCTTTCTATCAGTGCACTAAATAggtaatagagtgccatttgggacgcagacaaaTCACTTTTGAGTTGACTATATAAAGTTAACTTTGTTTTCCAAATTGAAAACATCAGACACAAAAAAACACCCACACCTGACTGTTTTAATACTACACTCTCAGAAAAAACACCCACACCTGACTGTTTTaatactacactcttagaaaaaaagatgTCATCTAGAAacttaaagggttcttcggctgtccccttaGGAGGATCATTGAAAAAacatttttggttgcaggtagaatcATTAtgcgttccatgtagaactctttctACAGAGGGTCTACATGGaccccaaaagagttctacctggaaccaaaaaagggttatcctGTGGGGACAGATGAATAACCTTTTTGGAATCTTTTTTCAAAGAGTAAATAGCACCCATCCTCTAATTCACTATACTCTTGACTCGCCACTCCCTTCACTAAGCACTGAGAGTTGGTTAGAGAGATGAGGTGTTTTAAAGGTATACCTCCTGGAGGGCACATCTCCAGGGTTAGTCCTTACACACTCCTTAGCAGATGTGCAATACCTCCCAAGTAGACGAGGGCTGTGGAGACCAGTCTCACTGGTCTCTAGtatatgagagaaagagagagaggagggatgagaaagAGAACAAGCGAGATTGACAGGACAGAATACAATGAGAGAAAAGAGAGTGATATAAAATCAGTGAGAGAAAGAGTTATAGAGTGAGAGTAAGGGAGAGCtaaataggtagagagagagagaactagagatgGAGAGCAGTGGTGAGCTCTAACAGTAATTATCCAGGGGAATGTCCTGACATTTGTCCTGACATTTTCCGAGGCTGCCCTCAAACCATCTGTGTAAAGATCCCTAATGGTACagtgtggaacacacacacagatggcaaGACAAGAGAGCCTGCCTCTCCAACCTTTACCGCTAATCAGCTGATATGCAGCTCTAGCAGGAGCTAGAGacgctgatctaaggtcagttttgcattacCTCTCCCTAATGGTTTGGGTTAGAAATGTGGGCAGggtaaactgatcccagatcattTTCTAATGGCTACTTATCTCTGACTCATCATACAACTGTGAAGGGAACGTTTATGATAGGTACTCACACAGAGGAACGGCTGATGGTATCCTAATCCTTGTTCTGTCCTAATCCTAATACCAAATGCCATTACCAGGTTGATAAATGCCACACTAGAGAGACAGGTAAGTGAGAGAGTGGGGATGCAACTTCCTGAATtgacaaacttctacagatcCTCAAGATCACTAGTGTTTAAATTGGTCCATGATCATGTGACTGTTCCTAAATCTGTTTCATTTCATCAATCAGTGTCCACTTCCTTGGTGATCACCTCTGATCTTTTCTGGGCTACCAGAAAACCCATCTGATTAATACAGAAGAGAACTTCTCTAACTCTAAAACGATGTGTTGTGTTAGTTTGTTTGTCATGGGCTTTTGAAAGTTTCAGACTATGACTATACAATCTGTCAACGAGAACTTCAATCATTAAACTTCAAAACAGTGAATCCTGTAAAGATTTAGTGAATTGCACAGATGAGGTATTGAAAGCAGTATGTTTGAAAATTATCTTCAGAGTGTGTGGTTTGGTGCAAGAATATGATACATTTGCTAAACTCTAGATAAATGAGAGGAAGAGAAACATAAACTCTGATCTTGGACTACAGAGGTTACCCTCCAACCTACCATGCTTGAGATGTTGACCTAGCTTCTCATACAACCATCAACGCTCTCCCACTGGTGTTACAAAAGAAAGTCCCTCCTTCCTTTTCCTCCCACATTCATGTTTTTTTATACATAAGACTGTACAAAGTAGTCCTCTGTTTTCATAGAGTGTCTTTTTTATATGAAAATAAATTTTCAAATTGATTCAAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953306.1 False 6641 mRNA 0.52 34 56028870 56501591
TU1790095 False 1262 TUCP 0.49 2 56028938 56169203
TU1790101 False 319 lncRNA 0.42 1 56472421 56472739
TU1790089 False 3591 lncRNA 0.40 3 56500720 56504444
TU1790091 True 3563 lncRNA 0.40 3 56500720 56504444

Neighbor

gene id symbol gene type direction distance location
LOC110496554 LOC106588828 coding upstream 815703 55173706 ~ 55213167 (+)
LOC110496553 LOC106588826 coding upstream 857476 55051875 ~ 55171394 (+)
tppc3 tppc3 coding upstream 1169792 54853906 ~ 54859078 (+)
armh2 cssa27h6orf229 coding upstream 1201251 54823660 ~ 54827619 (+)
LOC110496551 fam65b coding upstream 1211511 54738253 ~ 54817359 (+)
LOC110496558 LOC106588839 coding downstream 67769 56569360 ~ 56704104 (+)
LOC110496561 LOC106588843 coding downstream 319943 56821534 ~ 56833489 (+)
LOC110496562 LOC106588845 coding downstream 343582 56845173 ~ 56849827 (+)
LOC110496564 LOC106588844 coding downstream 359906 56861497 ~ 56876018 (+)
LOC110496570 NA coding downstream 584090 57085681 ~ 57087010 (+)
G1564492 NA non-coding upstream 77996 55948743 ~ 55950874 (+)
G1564471 NA non-coding upstream 118764 55909557 ~ 55910106 (+)
G1564470 NA non-coding upstream 120222 55908085 ~ 55908934 (+)
G1564468 NA non-coding upstream 122074 55906567 ~ 55906796 (+)
G1564456 NA non-coding upstream 130305 55876155 ~ 55898565 (+)
G1564896 NA non-coding downstream 3517 56505108 ~ 56505317 (+)
G1564900 NA non-coding downstream 6693 56508284 ~ 56508487 (+)
G1565273 NA non-coding downstream 195269 56696860 ~ 56697134 (+)
G1565206 NA non-coding downstream 224356 56725947 ~ 56765416 (+)
G1565307 NA non-coding downstream 246741 56748332 ~ 56749389 (+)
G1563547 NA other upstream 889639 55138648 ~ 55139231 (+)
LOC110496545 LOC106588816 other upstream 1518124 54412770 ~ 54510923 (+)
G1561856 NA other upstream 2151940 53872173 ~ 53876930 (+)
G1561845 NA other upstream 2187999 53817164 ~ 53840871 (+)
G1565672 NA other downstream 530030 57031621 ~ 57031963 (+)
LOC110496571 hoxa7aa other downstream 607537 57109128 ~ 57112335 (+)
LOC110496591 LOC106588881 other downstream 1349630 57851179 ~ 57870361 (+)
LOC110496592 LOC106588883 other downstream 1415024 57893854 ~ 57935297 (+)
G1566224 tbc1d5 other downstream 1439506 57941097 ~ 57946763 (+)
G1564889 NA non-coding upstream 730 56471470 ~ 56471691 (+)
G1564888 NA non-coding upstream 2567 56469651 ~ 56469854 (+)
G1564880 NA non-coding upstream 12496 56454904 ~ 56459925 (+)
G1564870 NA non-coding upstream 41629 56430520 ~ 56430792 (+)
G1564832 NA non-coding upstream 111210 56360981 ~ 56361211 (+)
LOC110496862 LOC106588838 other upstream 303218 56028870 ~ 56504444 (+)
G1564638 LOC106607612 other upstream 420628 56050588 ~ 56051793 (+)
G1564711 NA non-coding downstream 3801 56173004 ~ 56173206 (+)
G1564720 NA non-coding downstream 15058 56184261 ~ 56184491 (+)
G1564726 NA non-coding downstream 20505 56189708 ~ 56190328 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_014215 NA non-coding NC_007130.7 CM002903.2 38733094 ~ 38778761 (+)
grasscarp (Ctenopharyngodon idella) G231573 NA non-coding CI01000054 null 3779632 ~ 3783260 (-)