LOC110496952 (LOC106588868)


Basic Information

Item Value
gene id LOC110496952
gene name LOC106588868
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 57838719 ~ 57848361 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572952.2
GCTCAGTCTATCAGTCAGCAGCATCTCTACAGGATGGAGCAGCACACCTCTCTCTACATGCTACTCTGCATGCTGAATACTGTGATATACTCTGGACATGCTCAAATTAATGcctctctgAGCATCAGTCCTGACAGATCTCAGTTCTTTGAATatgagtctgtctctctgagctGTGAGGTTCAGAGGGGCTCTACTGGATGGAGAGTGGTGAGGAACACGCTGAAAGGAGGGACTGAAGAGTGTCCCACTGACTGGGGATTTTTTAAAGGGTCTTCATGCACCATATCAGCAGTACCATCAGACAGTGGAGTGTACTGGTGTGAGTCTGGGTCTGGAGAACACAGCAATGCAGTTAACATCACAGTACATGATggggctgtgatcctggagagcccTGCCATTCCTGTGACTGAGGGATATTTTGTGACTCTGCGCTGCGTATATGAAGATAAGAAAACGAAGAAAACATCCTCAAACTTCAGAGCTGATTTCCATAATGATGGATCCCTCATCATGACCAACACTACAGGGGAGATGACCATCCCTGCAGTATCCAAGTCAGATGAAGGGCTCTACAAGTGTAACAACCCTAAAGGAGAATCACCAGAGAGCTGGATGACTGTGACAGTTCCATCTTCAGCTCCAGGGCCAGCCCCATCTCCAGCAGTCCCAGTGtggtccatctctctgcccaggcTGCTGTGTAGTCTACTAGTAGTGTCTCCTTACCTGCTGGTGACCATCATACTGGTAGTGAAATGCAACAGCCGCAGAAGCATGGCTCGAGCTCAGTCTGATGAAGAGAAGAAAAGATGTACTGTCATCACATAATCAGCATGGAATGTTACGCAACAACACACTTTATGGGAACCATGTTAATATGGTAACATCGGTGAACATTGTTAAAGAGAAGAGTAACcatgttattgttgttgtgttGGAGTACACACACTACTGTAGGCCCGTGTTCTGAGTCTGTGTCATGCTCCATGTAGCATTGCAAGGTTGTGTTACaggtcagaggga

Function

NR:

description
low affinity immunoglobulin gamma Fc region receptor II-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572952.2 True 1029 mRNA 0.47 6 57838719 57848361

Neighbor

gene id symbol gene type direction distance location
dazl dazl coding downstream 7553 57822733 ~ 57831166 (-)
rftn1a LOC106588880 coding downstream 25828 57766500 ~ 57812891 (-)
LOC110496588 LOC106588875 coding downstream 123066 57699114 ~ 57715653 (-)
LOC118941192 NA coding downstream 181904 57652774 ~ 57656815 (-)
fam221a fam221a coding downstream 210410 57599288 ~ 57628309 (-)
LOC110496593 tbc1d5 coding upstream 91252 57939613 ~ 57966150 (-)
LOC110496867 LOC106588885 coding upstream 148566 57996927 ~ 58019631 (-)
sgo1 LOC106588889 coding upstream 364868 58213229 ~ 58223674 (-)
LOC110496870 LOC106588890 coding upstream 390109 58238470 ~ 58295781 (-)
LOC110496599 LOC106588891 coding upstream 454466 58302827 ~ 58306500 (-)
G1566713 NA non-coding downstream 73548 57764502 ~ 57765171 (-)
G1566715 NA non-coding downstream 76740 57756382 ~ 57761979 (-)
G1566714 NA non-coding downstream 78344 57692911 ~ 57760375 (-)
G1566748 NA non-coding downstream 104328 57734123 ~ 57734391 (-)
G1566716 NA non-coding downstream 146262 57692082 ~ 57692457 (-)
G1566828 NA non-coding upstream 13545 57861906 ~ 57863122 (-)
G1566839 NA non-coding upstream 50600 57898961 ~ 57901421 (-)
G1566857 NA non-coding upstream 82660 57931021 ~ 57931904 (-)
G1566806 NA non-coding upstream 95296 57943657 ~ 57944600 (-)
G1566871 NA non-coding upstream 125044 57973405 ~ 57976522 (-)
LOC110496560 LOC106588840 other downstream 1101372 56728341 ~ 56737381 (-)
G1565122 LOC106613431 other downstream 1350430 56481468 ~ 56488289 (-)
G1563253 NA other downstream 3173076 54660626 ~ 54665643 (-)
LOC110496860 LOC106588819 other downstream 3185869 54636849 ~ 54652932 (-)
mrpl3 mrpl3 other downstream 3943770 53887137 ~ 53895002 (-)
G1566899 NA other upstream 179150 58027511 ~ 58027790 (-)
G1566923 NA other upstream 227262 58074209 ~ 58078146 (-)
G1566972 NA other upstream 319023 58167384 ~ 58167697 (-)
G1567080 NA other upstream 562138 58410499 ~ 58411129 (-)
G1567875 NA other upstream 1021002 58869363 ~ 58870007 (-)

Expression


Co-expression Network