LOC110496600 (ubql4)


Basic Information

Item Value
gene id LOC110496600
gene name ubql4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58307374 ~ 58319520 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953356.1
GATCCGGAAGTGGACGCCAAATCTGAACGATTCCATCGGAGGAGTAAAGATGGCGGACAACGGCGGCGCAGATCCTGTTAATAACAACAATGATACAACTGTTGGTTTGGAGGGAACTATTATCAAGGTCACAGTCAAAACCCCAAAAGACAAGGAGGAAATCGCCATCTCGGAAGATGCCTCTGTCACTCAGtttaaAGAGGAGATCTCACGGAGGTTCAAAGCCAAGCAGGATCAGTTGGTTCTGATCTTTGCAGGGAAGATACTGAAAGACGGGGACTCTCTCAACCAGCACGGCATCAAGGATGGCCTGACAGTCCATCTGGTCATAAAGACAGCACACAAGGCAGGAGATGGCGCTAGTTCCTCTTCCTCCGTCACCACCCAGGTGGGCAGCAGTAGTGGCAACTCCTCTGGCCCCAGTTCTGCAGCCCACCCTTCTACTGTAGGGTCCACTGGAGGCCCTGCCTCGGCACCCCCACAGACCCCCAACATACTGAccGGGTTCGGTGGCTTGTCCAGCCTGAGCAGCATGGGCATGGGCTCCGCTAACTTCATGGAGCTGCAGCAGCAGATGCAGAGCCAGCTGATGTCCAACCCGGAGATGCTGTCCCAGATCATGGAGAACCCCCTGGTGCAGAACATGATGTCCAACCCAGACCTGATGAGGCAGATGATCGTGGCTAACCCCCAGATGCAGCAGCTGATGGAGCGCAACCCCGAGATCTCCCACATGCTCAACAACCCAGAGCTTATGAGACAGACCATGGAGCTGGCCAGGAACCCTGCCATGATGCAGGAAATGATGCGTAACCAGGACCGGGCGCTTAGCAACCTGGAGAGCATCCCCGGAGGCTACAATGCCCTGCGCAGGATGTACACAGACATCCAGGAACCCATGTTCAGCGCCGCACGAGACCAGtTTGGAAACAACCCTTTCTCAGCCCTGGGGGGCAACTCTGACGGGGGGGTGCAGCCATCGAGGACAGAAAACCGGGAGCCCCTGCCCAACCCCTGGGGTTCAACTAACCCCTCTGAGGGTGGAGGGGGCACGGGCATCACAGGCTCCTCTGCCACTGGCAGCACCACCCCCAATGTGTCCAACCCTCTGGGCGTCAACTCTGCCAGTCTGGGTAACGGCATGTTCAGCAGTCCGGGCATGCAGAGTCTGATGCAGCAGATCTCGGAGAACCCCCAGCTGATGCAGAACATGCTGTCTGCTCCCTACATGCGCAGTATCATGCAGTCTCTGGCCCAGAACCCAGACATGGCCTCCCAGGTGTTGATGAATAACCCTCTGTTGGCTGGAAACCCCCAGCTGCAGGAACAGTTCAGGAGCCAGCTGCCTGTCTTCCtgcagcagatGCAGAACCCAGAGGCTCTTTCTGTGATGACCAACCCCCGGGCCATGCAGGCTCTCCTCCAGATACAACAGGGCCTACAGACACTGCAGACAGAGGCACCGGGACTCATGCCAagTTTGGCACCAAGTGGACTGCCAGGAGGTCTCCCTGGAGGTCTACCAGGGGGACTAGTGGGTGGATTACCAGGTGGAATACCCACAACTCCCCTGTCCACGGGAGGGGGTGTGGCTCCAGAGAACCCTGCCTCTTCGCGAAGTGCTGGGGAAAACCCAGCCCAGCAACTGATGATGCAGCAGATGCTCCAAATGTTCGCAGGAGGGAATTCCTCGAGCCAGACCCCAGAGGTGCAGTTCCAGCAGCAGCTGGAGCAGCTGGGCGCTATGGGCTTCATCAACCGAGAGGCCAACCTGCAGGCCCTGATCGCTACCGGAGGAGATGTCAACGCTGCCATTGAGAGACTGCTGGGCTCACAGCCCTCATAAAGACACACTCACTCAGTCACATCgatacagacacatacatacatactatcCACCTCTGCAGCAAGGGGaatgcacacacatatacattgtCTACAGAGAACCAAGAGAGAAGAAATAAACCATCCAAAAAAGACACAGACAAAACCCGGTCAGGACATGTACCATTCTAAACATCCACCGCAGTCTCCTGTCAGATCATTCCCTAACCATGGCTCCCCTATCCCCTGGTTTTAGCCTCAtccatagagctctgctcagcagGACCAGACTGACCAGACCATTTCCTCAACAGAGGGGTGCCTGGTGAAGGGAGGGGGGTGAGCGAGAACGGCACAGATTTGCCTCCCTCAAAACCCTCTCCAAAACAGAATTTCTTTACTCTACCAGAATCACTAATCCCTCTTCCTCTTTAATAAAGCTGTGTTTATTCCAGGGGTAGACCaccctggtcctggagggctgcaggcacttcatgtttttgatttaactGACCTGGATGACCAGGCATGTTGAGGTTAGGCAATctctgaactgatcaattagctcagttggtcatgtgtggtgcctagttgggataaaatcctgcagtacctgcggcactccaggaacagggttgcctacccctggtTTATTCAATGGGGTGGAGGGTTCGTAGTGCGGCAGATAGAAATGCATTGGCATAGAGCTGTTTATGAAACATTCCAGGGATTTGTTTCCTGTCTATATGTTGCATTTCTAGCTGCAATGTGTTTGTAACCTTCCACCCTTTTGACTAAGCCCCTGATTGCAGGGTAAGGTATATGAAGACCGGAGGAAGAGAATCACAAAACAGAACTTTGTCAATCTCACACGGATATCAGTTAAGCCTGCCCGAAACCCTTTCTATTTATTGCTAAAAGAACCCCCACACTTCCCTAAAATAAAGCAAATAGTCATTCCAGATAGGATATCTCTATCTCCACTCAGCTGTGAGTTCTTCCCTGAAGGTAGGATTGCTGTGCTTTTTttgtcttcaacaaaacattcaaCAAAACATTTAACACCAACCACGCTTATCAAATGGATCGATTTGATCAAACCCTGGCTAGTCAAATTGGTGGTCTAGATTGGTGGTCTAGATTGGTGGTCTAGATTGACTTCACACACCGGCGTGTCACAAGATTGAGAACTGTCATAATGGTTATTAAAAAGACAGGAGTTCTGGGGAAGAAGACACAAAGACAAGACAGATTTCCTTTTCATTTTATTCTGATTCATTATGTATTTTAATTTGATGTGTAAGTAGTACATATAGAATCTGTTTTTgtctcattaaaaaaaatattcctggaaaatgtatGAATAAAATATAATGAAAAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K04523 UBQLN, DSK2; ubiquilin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953356.1 True 3207 mRNA 0.51 11 58307374 58319520

Neighbor

gene id symbol gene type direction distance location
LOC110496599 LOC106588891 coding downstream 874 58302827 ~ 58306500 (-)
LOC110496870 LOC106588890 coding downstream 11593 58238470 ~ 58295781 (-)
sgo1 LOC106588889 coding downstream 83700 58213229 ~ 58223674 (-)
LOC110496867 LOC106588885 coding downstream 287743 57996927 ~ 58019631 (-)
LOC110496593 tbc1d5 coding downstream 341224 57939613 ~ 57966150 (-)
LOC110496601 LOC106588893 coding upstream 30007 58349527 ~ 58412935 (-)
LOC110496602 LOC106588895 coding upstream 124128 58443648 ~ 58573152 (-)
LOC110496603 NA coding upstream 269575 58589095 ~ 58609677 (-)
si:ch211-13c6.2 LOC106588899 coding upstream 309796 58629316 ~ 58640812 (-)
LOC110496605 LOC106588900 coding upstream 321513 58641033 ~ 58661466 (-)
G1566997 NA non-coding downstream 94845 58210670 ~ 58212529 (-)
G1566987 NA non-coding downstream 107800 58193069 ~ 58199574 (-)
G1566966 NA non-coding downstream 146249 58160815 ~ 58161125 (-)
G1566960 NA non-coding downstream 158371 58148732 ~ 58149003 (-)
G1566958 NA non-coding downstream 161021 58145578 ~ 58146353 (-)
G1567068 NA non-coding upstream 40011 58359531 ~ 58360223 (-)
G1567288 NA non-coding upstream 147162 58466682 ~ 58467437 (-)
G1567326 NA non-coding upstream 214243 58533763 ~ 58536868 (-)
G1567334 NA non-coding upstream 233785 58553305 ~ 58555382 (-)
G1567348 NA non-coding upstream 258005 58577525 ~ 58577752 (-)
G1566972 NA other downstream 139677 58167384 ~ 58167697 (-)
G1566923 NA other downstream 229228 58074209 ~ 58078146 (-)
G1566899 NA other downstream 279584 58027511 ~ 58027790 (-)
LOC110496560 LOC106588840 other downstream 1570027 56728341 ~ 56737381 (-)
G1565122 LOC106613431 other downstream 1819085 56481468 ~ 56488289 (-)
G1567080 NA other upstream 90979 58410499 ~ 58411129 (-)
G1567875 NA other upstream 549843 58869363 ~ 58870007 (-)
G1567871 LOC106588914 other upstream 551417 58870937 ~ 58873691 (-)
G1567931 NA other upstream 685325 59004845 ~ 59074648 (-)
G1568017 NA other upstream 835508 59155028 ~ 59157044 (-)

Expression


Co-expression Network