Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941195 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 58383315 ~ 58384050 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037522.1 | False | 236 | mRNA | 0.42 | 4 | 58383315 | 58384050 |
| XR_005037521.1 | True | 213 | mRNA | 0.42 | 3 | 58383705 | 58384050 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941193 | NA | coding | upstream | 64 | 58378682 ~ 58383251 (+) |
| LOC110496954 | LOC106588892 | coding | upstream | 45239 | 58326130 ~ 58338076 (+) |
| LOC110496595 | LOC106588888 | coding | upstream | 170757 | 58188792 ~ 58212558 (+) |
| LOC110496594 | LOC106588886 | coding | upstream | 195531 | 58182477 ~ 58187784 (+) |
| LOC110496868 | LOC106588864 | coding | upstream | 242696 | 58065484 ~ 58140619 (+) |
| LOC118941196 | NA | coding | downstream | 53 | 58384103 ~ 58384651 (+) |
| LOC118941194 | NA | coding | downstream | 1246 | 58379624 ~ 58386065 (+) |
| LOC110496610 | aunip | coding | downstream | 353299 | 58737349 ~ 58739567 (+) |
| nanos2 | LOC106588910 | coding | downstream | 439152 | 58823202 ~ 58823929 (+) |
| LOC110496618 | LOC106588914 | coding | downstream | 479963 | 58864013 ~ 58873692 (+) |
| G1566457 | NA | non-coding | upstream | 3919 | 58378217 ~ 58379396 (+) |
| G1566443 | NA | non-coding | upstream | 30834 | 58349530 ~ 58352481 (+) |
| G1566440 | NA | non-coding | upstream | 39374 | 58343656 ~ 58343941 (+) |
| G1566439 | NA | non-coding | upstream | 40607 | 58342440 ~ 58342708 (+) |
| G1567094 | NA | non-coding | downstream | 53667 | 58437717 ~ 58438457 (+) |
| G1567095 | NA | non-coding | downstream | 57852 | 58441902 ~ 58445013 (+) |
| G1567083 | NA | non-coding | downstream | 82856 | 58466906 ~ 58467555 (+) |
| G1567160 | NA | non-coding | downstream | 162034 | 58546084 ~ 58549151 (+) |
| G1567178 | NA | non-coding | downstream | 193784 | 58577834 ~ 58578151 (+) |
| G1566445 | LOC106588893 | other | upstream | 6309 | 58364256 ~ 58377006 (+) |
| G1566224 | tbc1d5 | other | upstream | 436552 | 57941097 ~ 57946763 (+) |
| LOC110496592 | LOC106588883 | other | upstream | 462669 | 57893854 ~ 57935297 (+) |
| LOC110496591 | LOC106588881 | other | upstream | 520269 | 57851179 ~ 57870361 (+) |
| LOC110496571 | hoxa7aa | other | upstream | 1271352 | 57109128 ~ 57112335 (+) |
| dlx5a | dlx5 | other | downstream | 573071 | 58957121 ~ 58959671 (+) |
| sem1 | shfm1 | other | downstream | 640930 | 59024919 ~ 59035388 (+) |
| G1567716 | asb4 | other | downstream | 925934 | 59309984 ~ 59312723 (+) |
| G1567804 | col1a2 | other | downstream | 1117123 | 59501173 ~ 59585317 (+) |
