LOC110496602 (LOC106588895)


Basic Information

Item Value
gene id LOC110496602
gene name LOC106588895
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58443648 ~ 58573152 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572588.2
CAAGCTAACCGGATGCTTTTGGTTTGCGCGTGAGAACTTCGAAGTCGTCCGTAGGGCTGTACCTCTCGTTTCTCTCTGGACCATCTGACAAGCCTGCTGCGTGTTACCCATGAGTCCTCGCTCATATAACTGAAGTTTAGAGTTGACTCTGATTTTAGCTATCCTCGAACGGTCTTATTCGCTCCTCACCACTAGCGCACTGGACCAGCGAGACGCACAGGAAAGGAAGCAGTTCTGTGGGCATTTTGCACAGCCGCGAACCTCAAATATACGATTAAGAAAATATTAATACCAACAGAAATCTTGAGGAAAGAGCAGAGCGATCACGAATCGAGAGTTCTTTACCTAATTTAACCGTAAGCCTATAATAAATACGCTTGTCCAGTAAACTTTTGATGCTTTCAATTGCGCGCTTTAAATGTTTTCTTAATCATTTCGAGCAAAAAGCAAATTTATGATGACGACAATGCAAATTAGCGACAGTATAGGATAGGTTACAAAGTTACTGTTGCCGCTGTCAAATGATCTTGTAATCATATTATTCGATGGAACCTCACGTTAAATGTTTAACGGTAATTGGGATTATCATATTACCAATTTAACATTTTCTTCAACTTGCATTTGACATACCGCACATGTCAAAATGCCATGAACATTTTCTTTTGTGGTCGTGACTTGATTTATAGATAACTTATTTAACAAACGAAATTCGAAGTAGACCCTGACATTGGAGGAATGAAATTATGACCTAGTCCAAGTAGGCTAATTATTATTCAACGCGGACAAGTTGATCATGACTTCGATTTCAGTTGGCTAAATCTCCAACGTAGATATGGGCTCACTGTTAAATAGGTGATTTAAACTGTATTCTGTTGTATTTAATATAGGCCTATATTGGCTAACCATGTTAGGGAGCCCATCAAATAACGGTGGCATTAGAATGTTGGTGCCCCCCGCATCCAACGAAGAAAGGCGGGTTGAATTTGTGGCTCTTACCGCAGTTCATATGGAGAGGAGCGAACCATCGACCCCGGAGCGCGCGCACCCCTCTCACCGCACCGGGCTCCTCGGTACCCCGCTGCCGGGGCGTCCTGGACCACGGGCGACCACCTCAGCCTCCAGCAAGCGCTACAGAAAGTTTCAGAACTTCTTGTACAACGTACTGGAGAGACCACGAGGATGGGCATTCATCTACCATGCGTTCATtttcCTGCTGGTGTTCAGCTGTCTGGTGCTGTCTGTGTTCTCCACCATCCCAGGCAATCAAAAGATAGCCAACGAAGGACTCTTCATCCTGGAGTTTGTAATGATCGTGGTGTTTGGTCTGGAATACGTTGTGAGGGTTTGGGCGTCCGGCTGCTGCTGTCGCTACAGAGGATGGCAGGGGAGACTACGCTTCGCCAGGAAACCCTTCTGCATCATAGACTTCATAGTGTTTGTGGTGTCCTTGGCGGTGATCGCAGCGGGGACCCAGGGGAACGTCTTTGCCACCTCTGCCCTGCGCAGCATGCGGTTCCTCCAGATCCTCCGGATGGTACGCATGGACAGACGAGGAGGCACCTGGAAACTACTGGGCTCTGTGGTCTACGCCCACAGcaaggagCTGATTACAGCGTGGTACATTGGTTTCCTGGTCCTGATCTTTGCCTCCTTCCTGGTCTACCTGGCAGAGAAAGACGTCAACACAGAGTTCAACACCTACGCAGACTCCCTCTGGTGGGGAACGATAACTCTCACCACCATCGGCTACGGTGACAAGACACCCCGCACCTGGTTGGGGAGACTTCTGGCTGCCGGCTTCGCTCTCCTGGGCGTGTCCTTCTTCGCCCTTCCTGCCgGTATCCTGGGGTCAGGCTTTGCCCTAAAGGTGCAGGAGCAGCACAGACAGAAGCACTTTGAGAAGAGGAGGACTCCTGCTGCCAGCCTTATACAGgcTGCGTGGCGTCTGTACTCTACTGATGCTCAGCACTCCTACCTGACAGCCACATGGTACTTTTATGACAGCATGCTTCCATCCTTCAGAGAACTGACGCTACTGTTCAGTCACCTTCAGCGACGGCGTAGCGCCAAGAAGGTCCTTCACAACTCCCACCACACCCTGCTGTCTGGGCTACGGCCCTACAGCTCCCCCTACCTGTCAGGGGACAGCAGCAGCAAAATAGGTTTTCGAGACCGGATGCGGATGAACAACTCTCGGTCGTCCCAGGCGATCCGGAACAAGGCGTCTCCACTGCCTCCCGGGACGAGTTTCCGCCAGTCGCCCAGCACGGAGAATGTCCCAGAAGCCACCAGTCCCGGGAAGGTGCAGAAGAGCTGGAGCTTCAATGACCGCACGCGGTTCCGCACCTCTCTACGGCTCAAACCCAGACCTCCTGCAGACGTGGAAGGAGTAGGGGAGGACAGTGTTGAAGACAAACCATATTGTGATGTAGCCATGGAAGAGGTGATCCCAGCAGTGAAGACCTTGATACGGGCTGTCAGgatTCTGAAGTTCCTGGTGGCCAAGAGGAAGTTTAAGGAGACTCTGCGTCCGTACGACGTGAAGGACGTCATAGAGCAGTACTCTGCTGGACACCTGGACATGCTGGGGAGGATCAAGAGTCTAcaaaccagAGTGGATCAGATAGTGGGTCGGGGATCGTCCTACCAGCCAGATAATAAGAAGGTGAGGagtgagaagggagagaagacCCCTCCAGAACTGGACCTTCTGGATGAGCTCAGTATGATGGGACGGGTCATTAAGGTGGAGAAACAGGTGCAGTCGATAGAGAACAAGCTGGACCTCCTTCTTAACTTCTACACCCAGTGTCTGAAGAAAGGCTCATCCAACTTCACCCTGTCCTCCCTGTTGGAACCAGACCTGACATCAGACTACCACAGCCCCACGGACCACCGCGACCTCTTCCCCTCTGCCAACACACTCAACATCTCCCACTCAGAGTCCAGCAATATGGAGTGACTGGTAGTGTACTCActgactggggctggggctggggcggGTATGAACTGGGCCCACCACTAGACCCTCACCTCAATGTTTTTAAGCCCTGAGATGTCATGTCACTATACTAGACTGTAGCAGCACTCCTGGAACAAACCTCTATGCCCATATCTATTTGCAGTTGTAACCCTTGACCTTTCTACTGATCACCAAACCAATTAGATTCCTAACTTAGAATCCTCTTTCTAGGAATTCAGACTCCACACTTTAGAACCCACACTTATTAGTTCCTCCCTCCACATATTTAAAATCCTCTGCTTCATATGTTAGAGCCACCAATAGTGGAGAATTCATCAtgctatcctctctctattttagtgctgagcgattaaccgaaATGTTGGTTATTGTTCACCAACGTCGGGTCAGGTATCTGAATTCCATTTAATTCTGTTTTTATCTGTGAGCTCAGAGATGAATCATATTGaccgaactgtgcgatgtagtagggagttgtaatttccaacaggccaatggactctacaaggtatcgaaagcattccacagggatgatggcccatgttgactccaatgcttcggTCAATCTGGAGGCAAAAGAACcatacacctgtttaggcgaggtgcttgAAAAATAAAAGGAGACACGCAAactctaggagctcagacgcAATAATGTAATAACCAatagccaagctgtcttcatcagggtaacgctgcaatgcttcccacagttgtcaagttggctggatttcctttgggtggtggaccattcttgatacatgtgGGAAACTGTTTAactct

Function

NR:

description
potassium voltage-gated channel subfamily KQT member 4-like

GO: NA

KEGG:

id description
K04929 KCNQ4, KV7.4; potassium voltage-gated channel KQT-like subfamily member 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572588.2 True 3766 mRNA 0.49 14 58443648 58573152

Neighbor

gene id symbol gene type direction distance location
LOC110496601 LOC106588893 coding downstream 30713 58349527 ~ 58412935 (-)
LOC110496600 ubql4 coding downstream 124128 58307374 ~ 58319520 (-)
LOC110496599 LOC106588891 coding downstream 137148 58302827 ~ 58306500 (-)
LOC110496870 LOC106588890 coding downstream 147867 58238470 ~ 58295781 (-)
sgo1 LOC106588889 coding downstream 219974 58213229 ~ 58223674 (-)
LOC110496603 NA coding upstream 15943 58589095 ~ 58609677 (-)
si:ch211-13c6.2 LOC106588899 coding upstream 56164 58629316 ~ 58640812 (-)
LOC110496605 LOC106588900 coding upstream 67881 58641033 ~ 58661466 (-)
LOC110496608 LOC106588904 coding upstream 103065 58676217 ~ 58708019 (-)
LOC110496607 LOC106588901 coding upstream 135094 58708246 ~ 58723758 (-)
G1567068 NA non-coding downstream 83425 58359531 ~ 58360223 (-)
G1566997 NA non-coding downstream 231119 58210670 ~ 58212529 (-)
G1566987 NA non-coding downstream 244074 58193069 ~ 58199574 (-)
G1566966 NA non-coding downstream 282523 58160815 ~ 58161125 (-)
G1566960 NA non-coding downstream 294645 58148732 ~ 58149003 (-)
G1567348 NA non-coding upstream 4373 58577525 ~ 58577752 (-)
G1567355 NA non-coding upstream 10674 58583826 ~ 58584056 (-)
G1567353 NA non-coding upstream 15208 58588360 ~ 58588982 (-)
G1567368 NA non-coding upstream 89461 58662613 ~ 58662887 (-)
G1567380 NA non-coding upstream 120820 58693972 ~ 58694822 (-)
G1567080 NA other downstream 32519 58410499 ~ 58411129 (-)
G1566972 NA other downstream 275951 58167384 ~ 58167697 (-)
G1566923 NA other downstream 365502 58074209 ~ 58078146 (-)
G1566899 NA other downstream 415858 58027511 ~ 58027790 (-)
LOC110496560 LOC106588840 other downstream 1706301 56728341 ~ 56737381 (-)
G1567875 NA other upstream 296211 58869363 ~ 58870007 (-)
G1567871 LOC106588914 other upstream 297785 58870937 ~ 58873691 (-)
G1567931 NA other upstream 431693 59004845 ~ 59074648 (-)
G1568017 NA other upstream 581876 59155028 ~ 59157044 (-)
LOC110496637 gng11 other upstream 1156027 59712624 ~ 59738593 (-)

Expression


Co-expression Network