LOC110496607 (LOC106588901)


Basic Information

Item Value
gene id LOC110496607
gene name LOC106588901
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58708246 ~ 58723758 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572598.2
AATCCCGCCTACTTCTACAATTGATCTAATTAAAAAGTTATTTTAATCGTGAATTTAACCACACTGgtaacctaatgcctaaccttaaattaagaccaaaaatatatatatttttcttcattaattGTTACGATATAGTACATTTTGACTTCGGAAACCGTACAGCAGCGTATAGTTGCGTCTCCAGGACGACAAACAATTACGAAACGAACCGATATGCTTGTTTGTATCCAGCAATCAACACCTGTCGCCGATATCCTTGAACCGGACTGTTTCAGAACTTTCAAAGAAGACATCGGTAATTTTCGGGAGGGAGATATTTGTTTAGGAATGTATCGGTGGGCAACGACAGTGATTGATCAATAACCATTCAACATTAGCGCAGAAGTTCAAAGAAGCTAGTTAGCGCGCTGCTGCAAGCAGAACCGGCTgccaaacaacaacacatgaaTCGTGATTTTGTATTTAACTAACTGTTTACATTCAACAACACCTTCAAACGAAAGGTGTTAAAAAAATTGTGTACTCATATGGAGATTGCAGCTGAAAAGGAAGTTGATACATTGTTGCCTTGATCAAGAACGTTCTGAAAACAGATGATTCAAGTGTTTCCTTGCAGAATTTCTACTTGTGGCTGACTGTTACTTTGTAATTACCAAAAAGGAATGAAAAACATTGCATAAGAGTTAACTAAACAAAGAATTAGGATGAACGTCACGGAAGTGGAGGATCATATTTCCATGAAATATGAAATAAAGAAAAGACTTGGAAAAGGGGCATATGGGATTGTATGGAAGgctgtggacagacagacaggagaagttGTGGCTGTAAAGAAAATATTTGATGCCTTTAGGAATAGGACTGATGCCCAGaggacattcagagaaatCATGTTTCTTCAGGAGTTTGGAGATCATGCCAACATCGTCAAACTGCTCAATGTCATCAGAGCTCAAAATGACAAAGATATTTACCTGGTCTTTGAATACATGGACACCGACCTGCATGCGGTGATAAAGAAAGGCAACCTGCTGAAAGACATCCATAAACGCTATGTCATGCATCAACTCCTCAAGGCCACCAAATACCTGCACTCAGGCAATGTCATCCACAGAGACCAGAAGCCCTCCAATATTCTACTTGACACGGATTGCTTTGTGAAACTTTGTGACTTCGGTTTAGCGAGGTCTCTCTGCCAGATCCAGGAGGATGCTGGGAACCCGGCGTTGACAGAGTACGTGGCGACGCGGTGGTACAGAGCTCCTGAGATCCTGCTGGGTTCCTCAAGATACACAAAGGGGGTAGACATGTGGAGTATAGGTTGTATCCTAGGAGAGATGCTACTTGGGCAGCCCCTTTTCCCTGGAACTTCCACCATCAACCAGATAGAGAAAATCATGAGTGCAATTCCACACCCTAGCCCAGAGGacgTACTTTCGATCAGATCTGAGTATGGTGCCTCTGTGATTCAGAGGATGCTACTGAAGCCCCAGGTGCCTCTAGAGGATCTTCTGCAATCGTCGGTGCCCCCAGATGCCCTAGACCTGGTGCGTCGCCTGCTGGTGTTCAACCCAGACAAGAGGCTGACCGCTGAGCAGGCCCTGCAGCACCTCTATGTCTCCAGATTCCACAACCCAGCCAAGGAGCCAGGTCTGGACTCTGATGTGATCCTGCCTGTGGATGATGATGTCCAGTTGTCGGTGGTTCAGTACCGTAATAAACTGTATGAGATGATTCTAGAAAAGAGGACCACAAGGAGAATGCCACGTCATGTAATGCCGAGGAAGAAAGAGGAGCCTGTCTCAAGGTCAGGGTCTGGGTGTGACAGTGGAGACCGTGGGAGGGAAAGGCCCACTGGGAAGGACAAAGGAGGGCCGGAGCCAGTGTCTGGTAATGGTGGAGGGGACCTTAGTGTTAAATCCCCTCATGATAAGACAGAACACCAGGCTGCTCGTCCAGTTATCACCGTACCTACACCAGTACCTGTGTCCACCCAGCCGTCCCTGGAGAGGTCCAGCCCTGCAGCTAGCCCCGTCATGGGAAAGACTACATATAATCCCATCACACACGTTGCCAATGGTTTTGTTCGAAATCTGGCTGGACCACCTCACTATTTTCGCTCCGGTACTGCCAGCAGGGAACTGGAGGGACAGATGAGTAATGAAAATGTAACTGTACCGCCAGCAGAGGGCGCTATTCGCAACACTGTTTCTATGGAGCAGATTCTGCAGCGCGGTCGCTCAGCCCCTGTCAGCCGTACCCGTTCCTTCTCCCTGACCCTCTCCCACCCTCAGAACAACCCACTTGTCCGCAGAGACGATCCCTCTGTGTCCTCAGGGATGTGTGTCACCTCTGCACACCTGAACCAGCGGTCCCAGTCTCAGTCACGAGAGGCACGGCCCGCTCCTCCCAGGTTCAGTAAGAAGGTTTTCCAGTGTAACGCCAACATGGCGGCTGCCGGGGATCCCCGTGCCAAACTAGGCAGCTACTCTCAGGCTTACGGCACCATCAACAAGACAGAACTGGACAACCTTATGAGGAGTCGACACCACCAGTAACCACCACACTATGCTGGATGTATGGGACACTGTCCGACATCAGACTGGGCAAGAGACAAGGTGACAGGGAACAGGGAGATATTGGCTACTGGAAAGTTGGGGGAGAAATATTATTCCAAGACATAAAAGTTCAGCAGCACAGATTGAAGTAACCATGGAGATGGAAATCCATGGAGTAAAGTGGCAATGATTTACACAGTCAATTTAACCCCATTTTCTTCATGAAATAATGTCATGTTGGGAAATGGGGACTATGGAGCCTTAGTTTAATGTAACTAAATGTGCAAGTGTTTTACACCGAAATGCTTTATACTAGACTAGAGGGAACAAGACATAGCAGTGTAAATGTATGTCAATTGAGTCAGGCAATACTTTTGTAAAATGGAACATTTGTAATGTTGTGTATAAGTAAATAACTATTTTAGCCATAATTTCCTGGCAAGCAAATTCAATATACTTTAATGCAAAATGGTGCTTCCAACACAGTAAAATAAATGTTGACAGTTGATGTATGTAAAACAAACCTGTGGTTTCATATTAAAAAGCAATTGTGACTACTTTCTTTTAAAAATGTGTGTTTT
>XM_036953354.1
AATCCCGCCTACTTCTACAATTGATCTAATTAAAAAGTTATTTTAATCGTGAATTTAACCACACTGgtaacctaatgcctaaccttaaattaagaccaaaaatatatatatttttcttcattaattGTTACGATATAGTACATTTTGACTTCGGAAACCGTACAGCAGCGTATAGTTGCGTCTCCAGGACGACAAACAATTACGAAACGAACCGATATGCTTGTTTGTATCCAGCAATCAACACCTGTCGCCGATATCCTTGAACCGGACTGTTTCAGAACTTTCAAAGAAGACATCGAATTTCTACTTGTGGCTGACTGTTACTTTGTAATTACCAAAAAGGAATGAAAAACATTGCATAAGAGTTAACTAAACAAAGAATTAGGATGAACGTCACGGAAGTGGAGGATCATATTTCCATGAAATATGAAATAAAGAAAAGACTTGGAAAAGGGGCATATGGGATTGTATGGAAGgctgtggacagacagacaggagaagttGTGGCTGTAAAGAAAATATTTGATGCCTTTAGGAATAGGACTGATGCCCAGaggacattcagagaaatCATGTTTCTTCAGGAGTTTGGAGATCATGCCAACATCGTCAAACTGCTCAATGTCATCAGAGCTCAAAATGACAAAGATATTTACCTGGTCTTTGAATACATGGACACCGACCTGCATGCGGTGATAAAGAAAGGCAACCTGCTGAAAGACATCCATAAACGCTATGTCATGCATCAACTCCTCAAGGCCACCAAATACCTGCACTCAGGCAATGTCATCCACAGAGACCAGAAGCCCTCCAATATTCTACTTGACACGGATTGCTTTGTGAAACTTTGTGACTTCGGTTTAGCGAGGTCTCTCTGCCAGATCCAGGAGGATGCTGGGAACCCGGCGTTGACAGAGTACGTGGCGACGCGGTGGTACAGAGCTCCTGAGATCCTGCTGGGTTCCTCAAGATACACAAAGGGGGTAGACATGTGGAGTATAGGTTGTATCCTAGGAGAGATGCTACTTGGGCAGCCCCTTTTCCCTGGAACTTCCACCATCAACCAGATAGAGAAAATCATGAGTGCAATTCCACACCCTAGCCCAGAGGacgTACTTTCGATCAGATCTGAGTATGGTGCCTCTGTGATTCAGAGGATGCTACTGAAGCCCCAGGTGCCTCTAGAGGATCTTCTGCAATCGTCGGTGCCCCCAGATGCCCTAGACCTGGTGCGTCGCCTGCTGGTGTTCAACCCAGACAAGAGGCTGACCGCTGAGCAGGCCCTGCAGCACCTCTATGTCTCCAGATTCCACAACCCAGCCAAGGAGCCAGGTCTGGACTCTGATGTGATCCTGCCTGTGGATGATGATGTCCAGTTGTCGGTGGTTCAGTACCGTAATAAACTGTATGAGATGATTCTAGAAAAGAGGACCACAAGGAGAATGCCACGTCATGTAATGCCGAGGAAGAAAGAGGAGCCTGTCTCAAGGTCAGGGTCTGGGTGTGACAGTGGAGACCGTGGGAGGGAAAGGCCCACTGGGAAGGACAAAGGAGGGCCGGAGCCAGTGTCTGGTAATGGTGGAGGGGACCTTAGTGTTAAATCCCCTCATGATAAGACAGAACACCAGGCTGCTCGTCCAGTTATCACCGTACCTACACCAGTACCTGTGTCCACCCAGCCGTCCCTGGAGAGGTCCAGCCCTGCAGCTAGCCCCGTCATGGGAAAGACTACATATAATCCCATCACACACGTTGCCAATGGTTTTGTTCGAAATCTGGCTGGACCACCTCACTATTTTCGCTCCGGTACTGCCAGCAGGGAACTGGAGGGACAGATGAGTAATGAAAATGTAACTGTACCGCCAGCAGAGGGCGCTATTCGCAACACTGTTTCTATGGAGCAGATTCTGCAGCGCGGTCGCTCAGCCCCTGTCAGCCGTACCCGTTCCTTCTCCCTGACCCTCTCCCACCCTCAGAACAACCCACTTGTCCGCAGAGACGATCCCTCTGTGTCCTCAGGGATGTGTGTCACCTCTGCACACCTGAACCAGCGGTCCCAGTCTCAGTCACGAGAGGCACGGCCCGCTCCTCCCAGGTTCAGTAAGAAGGTTTTCCAGTGTAACGCCAACATGGCGGCTGCCGGGGATCCCCGTGCCAAACTAGGCAGCTACTCTCAGGCTTACGGCACCATCAACAAGACAGAACTGGACAACCTTATGAGGAGTCGACACCACCAGTAACCACCACACTATGCTGGATGTATGGGACACTGTCCGACATCAGACTGGGCAAGAGACAAGGTGACAGGGAACAGGGAGATATTGGCTACTGGAAAGTTGGGGGAGAAATATTATTCCAAGACATAAAAGTTCAGCAGCACAGATTGAAGTAACCATGGAGATGGAAATCCATGGAGTAAAGTGGCAATGATTTACACAGTCAATTTAACCCCATTTTCTTCATGAAATAATGTCATGTTGGGAAATGGGGACTATGGAGCCTTAGTTTAATGTAACTAAATGTGCAAGTGTTTTACACCGAAATGCTTTATACTAGACTAGAGGGAACAAGACATAGCAGTGTAAATGTATGTCAATTGAGTCAGGCAATACTTTTGTAAAATGGAACATTTGTAATGTTGTGTATAAGTAAATAACTATTTTAGCCATAATTTCCTGGCAAGCAAATTCAATATACTTTAATGCAAAATGGTGCTTCCAACACAGTAAAATAAATGTTGACAGTTGATGTATGTAAAACAAACCTGTGGTTTCATATTAAAAAGCAATTGTGACTACTTTCTTTTAAAAATGTGTGTTTT
>XM_036953355.1
aCAAAGTCATAAATCCCGCCTACTTCTACAATTGATCTAATTAAAAAGTTATTTTAATCGTGAATTTAACCACACTGgtaacctaatgcctaaccttaaattaagaccaaaaatatatatatttttcttcattaattGTTACGATATAGTACATTTTGACTTCGGAAACCGTACAGCAGCGTATAGTTGCGTCTCCAGGACGACAAACAATTACGAAACGAACCGATATGCTTGTTTGTATCCAGCAATCAACACCTGTCGCCGATATCCTTGAACCGGACTGTTTCAGAACTTTCAAAGAAGACATCGGTAATTTTCGGGAGGGAGATATTTGTTTAGGAATGTATCGGTGGGCAACGACAGTGATTGATCAATAACCATTCAACATTAGCGCAGAAGTTCAAAGAAGCTAGTTAGCGCGCTGCTGCAAGCAGAACCGGCTgccaaacaacaacacatgaaTCGTGATTTTGTATTTAACTAACTGTTTACATTCAACAACACCTTCAAACGAAAGGTGTTAAAAAAATTGTGTACTCATATGGAGATTGCAGCTGAAAAGGAAGTTGATACATTGTTGCCTTGATCAAGAACGTTCTGAAAACAGATGATTCAAGTGTTTCCTTGCAGAATTTCTACTTGTGGCTGACTGTTACTTTGTAATTACCAAAAAGGAATGAAAAACATTGCATAAGAGTTAACTAAACAAAGAATTAGGATGAACGTCACGGAAGTGGAGGATCATATTTCCATGAAATATGAAATAAAGAAAAGACTTGGAAAAGGGGCATATGGGATTGTATGGAAGgctgtggacagacagacaggagaagttGTGGCTGTAAAGAAAATATTTGATGCCTTTAGGAATAGGACTGATGCCCAGaggacattcagagaaatCATGTTTCTTCAGGAGTTTGGAGATCATGCCAACATCGTCAAACTGCTCAATGTCATCAGAGCTCAAAATGACAAAGATATTTACCTGGTCTTTGAATACATGGACACCGACCTGCATGCGGTGATAAAGAAAGGCAACCTGCTGAAAGACATCCATAAACGCTATGTCATGCATCAACTCCTCAAGGCCACCAAATACCTGCACTCAGGCAATGTCATCCACAGAGACCAGAAGCCCTCCAATATTCTACTTGACACGGATTGCTTTGTGAAACTTTGTGACTTCGGTTTAGCGAGGTCTCTCTGCCAGATCCAGGAGGATGCTGGGAACCCGGCGTTGACAGAGTACGTGGCGACGCGGTGGTACAGAGCTCCTGAGATCCTGCTGGGTTCCTCAAGATACACAAAGGGGGTAGACATGTGGAGTATAGGTTGTATCCTAGGAGAGATGCTACTTGGGCAGCCCCTTTTCCCTGGAACTTCCACCATCAACCAGATAGAGAAAATCATGAGTGCAATTCCACACCCTAGCCCAGAGGacgTACTTTCGATCAGATCTGAGTATGGTGCCTCTGTGATTCAGAGGATGCTACTGAAGCCCCAGGTGCCTCTAGAGGATCTTCTGCAATCGTCGGTGCCCCCAGATGCCCTAGACCTGGTGCGTCGCCTGCTGGTGTTCAACCCAGACAAGAGGCTGACCGCTGAGCAGGCCCTGCAGCACCTCTATGTCTCCAGATTCCACAACCCAGCCAAGGAGCCAGGTCTGGACTCTGATGTGATCCTGCCTGTGGATGATGATGTCCAGTTGTCGGTGGTTCAGTACCGTAATAAACTGTATGAGATGATTCTAGAAAAGAGGACCACAAGGAGAATGCCACGTCATGTAATGCCGAGGAAGAAAGAGGAGCCTGTCTCAAGGTCAGGGTCTGGGTGTGACAGTGGAGACCGTGGGAGGGAAAGGCCCACTGGGAAGGACAAAGGAGGGCCGGAGCCAGTGTCTGGTAATGGTGGAGGGGACCTTAGTGTTAAATCCCCTCATGATAAGACAGAACACCAGGCTGCTCGTCCAGTTATCACCGTACCTACACCAGTACCTGTGTCCACCCAGCCGTCCCTGGAGAGGTCCAGCCCTGCAGCTAGCCCCGTCATGGGAAAGACTACATATAATCCCATCACACACGTTGCCAATGGTTTTGTTCGAAATCTGGCTGGACCACCTCACTATTTTCGCTCCGGTACTGCCAGCAGGGAACTGGAGGGACAGATGAGTAATGAAAATGTAACTGTACCGCCAGCAGAGGGCGCTATTCGCAACACTGTTTCTATGGAGCAGATTCTGCAGCGCGGTCGCTCAGCCCCTGTCAGCCGTACCCGTTCCTTCTCCCTGACCCTCTCCCACCCTCAGAACAACCCACTTGTCCGCAGAGACGATCCCTCTGTGTCCTCAGGGATGTGTGTCACCTCTGCACACCTGATTTTCTCTCCATCTGGTCCTTTTGGGGGGTAAATATAGAACCAGCGGTCCCAGTCTCAGTCACGAGAGGCACGGCCCGCTCCTCCCAGGTTCAGTAAGAAGGTTTTCCAGTGTAACGCCAACATGGCGGCTGCCGGGGATCCCCGTGCCAAACTAGGCAGCTACTCTCAGGCTTACGGCACCATCAACAAGACAGAACTGGACAACCTTATGAGGAGTCGACACCACCAGTAACCACCACACTATGCTGGATGTATGGGACACTGTCCGACATCAGACTGGGCAAGAGACAAGGTGACAGGGAACAGGGAGATATTGGCTACTGGAAAGTTGGGGGAGAA

Function

NR:

description
mitogen-activated protein kinase 15

GO:

id name namespace
GO:0000165 MAPK cascade biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004707 MAP kinase activity molecular_function

KEGG:

id description
K19603 MAPK15; mitogen-activated protein kinase 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572598.2 False 3142 mRNA 0.46 14 58708246 58723747
XM_036953354.1 False 2821 mRNA 0.46 15 58708246 58723747
XM_036953355.1 True 2718 mRNA 0.48 14 58708720 58723758

Neighbor

gene id symbol gene type direction distance location
LOC110496608 LOC106588904 coding downstream 227 58676217 ~ 58708019 (-)
LOC110496605 LOC106588900 coding downstream 46780 58641033 ~ 58661466 (-)
si:ch211-13c6.2 LOC106588899 coding downstream 67434 58629316 ~ 58640812 (-)
LOC110496603 NA coding downstream 98569 58589095 ~ 58609677 (-)
LOC110496602 LOC106588895 coding downstream 135094 58443648 ~ 58573152 (-)
LOC110496611 vps28 coding upstream 1705 58725463 ~ 58737268 (-)
LOC110496609 cap2 coding upstream 16581 58739765 ~ 58789014 (-)
rbm24a LOC106588906 coding upstream 69541 58793299 ~ 58808572 (-)
LOC110496613 LOC106588909 coding upstream 100453 58824211 ~ 58852541 (-)
ptdss1b LOC106588913 coding upstream 130523 58854281 ~ 58863742 (-)
G1567380 NA non-coding downstream 13424 58693972 ~ 58694822 (-)
G1567368 NA non-coding downstream 45359 58662613 ~ 58662887 (-)
G1567353 NA non-coding downstream 119264 58588360 ~ 58588982 (-)
G1567355 NA non-coding downstream 124190 58583826 ~ 58584056 (-)
G1567348 NA non-coding downstream 130494 58577525 ~ 58577752 (-)
G1567865 NA non-coding upstream 98421 58822179 ~ 58822505 (-)
G1567871 LOC106588914 non-coding upstream 148098 58870937 ~ 58873691 (-)
G1567880 NA non-coding upstream 162150 58885908 ~ 58892166 (-)
G1567886 NA non-coding upstream 187731 58911489 ~ 58911850 (-)
G1567080 NA other downstream 297117 58410499 ~ 58411129 (-)
G1566972 NA other downstream 540549 58167384 ~ 58167697 (-)
G1566923 NA other downstream 630100 58074209 ~ 58078146 (-)
G1566899 NA other downstream 680456 58027511 ~ 58027790 (-)
LOC110496560 LOC106588840 other downstream 1970899 56728341 ~ 56737381 (-)
G1567875 NA other upstream 145605 58869363 ~ 58870007 (-)
G1567931 NA other upstream 281087 59004845 ~ 59074648 (-)
G1568017 NA other upstream 431270 59155028 ~ 59157044 (-)
LOC110496637 gng11 other upstream 1005421 59712624 ~ 59738593 (-)

Expression


Co-expression Network