LOC110496610 (aunip)


Basic Information

Item Value
gene id LOC110496610
gene name aunip
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58737349 ~ 58739567 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572605.2
GTGTTACCACACGAGGAAATGTATATTTGAATTATATTTCGTACTGATACTTTTATAAAGTGAGTGGAGTTTCATGTGCAATATCTGGCAAGTGGAAGCCAAATTATTTTCTGGCGCGCGAGACTCAAAAAAGACACAACATCGCTTGGCTATATGCAACCGGGGGGTTTCAATGTAAATCGAAGGAGGCTAATTTCCAAACGTATCATTCGCAAGCCTGTCCTACATTACCATGAAAACTTCCAAAGCGCCATCTCAGGCTTCAACACAGGAGGAGTGTGGGGTTTGGCTGGACACTGTAGACCTCAAAGAAAAGGCTAAACAGAGAAGGCCATTGCGACCCATCTCAAAACAACTGAATCCTCTGGCTCGGTCTGGAGGTTACAGCTTAGCAGTGGCGCTGAATTTTACACAAACAAAAATCCAGATTCCTGTAAACAAACAGAGCTCTATATCCTCATTCTTTACCCCGCAGCGCAAAGTGGCCCAAAAGGCACCTGCGTCTCCAGAGCCAAGTACACCCTCCACCAGATGTGCCTCAACTTCACTCAGGCGTGTTAACATTGGGAGCGGAACCAAACGGAAATGTGCAGCACGTTTAGAGTCAGGGGCACAGAGTACAGGAGCTCAACCCACCACCCTACAGATGAGCCCAGAGGGAGAGAATGCTACAGGCTATGAGTGGGACAGGCAGAGCTTCAGGGAAAGAGCATATTGGGAGGTTTCCCATATGCCCCATCTTAAAATGGACCGTCAGTCGGATGAGATGGAGGAACCAGACAAAAAGAGAAGGCTCTCGGTGAATTCCTCTCCCCCAGTAGAGACTGATACTCACGAGGAGGAGTGCAGTCAGGACCAATGGAGTGCCTGTAGCAGCCCACGGTATAGTGAAGATCTAAGTGAGCCAGATTCTGAGGGGCAGTGTGTTCTGACACACCAGGAACTCTTTGATGGAGTAAGACAGGCCAGTGACTCAGGCACTGCTTTCCCAGAGAGCCTGCAGAGTGAGGGTGGATTCAGGGCTTGGCTGGGTGCACAGGATAGAACCTCCAcccagaaaagggctgtcccttCTCATTTGATATCACAGCAGGTAGAAGGGAAAGAGAACGACTTACCACGATCAATGTCTTCGCCATCCCCAAACAAGatgtctcctcctctcagccctgTTTCCACTCACAGATGGACAAAACCACATCTTCCATCACCACAGATACATGTTCTAGAACAACCAttgagagagtgtgagggagacACTCTTGCCATGCTGTTCACACAGGACTCTGAGGGCTTCAGGGTGATTGCACACCGTGCTCTGGTATCAAGAAGCCCAATAAAAGACCAGACTAATGTATTAGCTAGTGGTAGAGACAGTATATTTGCTGCTGATAAAACGCTGCTAGGAGAGGAGTTGCTCTTCACCCAAGACTCTCAGGGAAACAAGGTTATCAAACACTGACAATGTATGTATAATGGTGAAAACTAATGAATGAAATTAAGAACATTTTAGATGTTTTGTGTGTTGTAAATTGTATTGCAGGTTAAGGTTTCTAATCACTTGTTTGAAAACCACTTATGATCTTTACTTGAACACTTACAGTACCTGGATTGAAAATGTATCTGATGTATCCAGTTTCTGAACATTTCTCTTTTCCATCTTTATGGCACTGAATAAAATGTAACACAAATAAGAGA

Function

symbol description
aunip Enables damaged DNA binding activity. Involved in double-strand break repair via homologous recombination; negative regulation of double-strand break repair via nonhomologous end joining; and spindle organization. Located in centrosome; site of DNA damage; and spindle pole.

NR:

description
PREDICTED: aurora kinase A and ninein-interacting protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572605.2 True 1698 mRNA 0.46 4 58737349 58739567

Neighbor

gene id symbol gene type direction distance location
LOC118941194 NA coding upstream 351385 58379624 ~ 58386065 (+)
LOC118941196 NA coding upstream 352698 58384103 ~ 58384651 (+)
LOC118941195 NA coding upstream 353299 58383315 ~ 58384050 (+)
LOC118941193 NA coding upstream 354098 58378682 ~ 58383251 (+)
LOC110496954 LOC106588892 coding upstream 399273 58326130 ~ 58338076 (+)
nanos2 LOC106588910 coding downstream 83635 58823202 ~ 58823929 (+)
LOC110496618 LOC106588914 coding downstream 124446 58864013 ~ 58873692 (+)
LOC110496619 catsper4 coding downstream 166938 58906505 ~ 58915399 (+)
chrc1 chrc1 coding downstream 178752 58918319 ~ 58922019 (+)
trnaa-ugc-140 NA coding downstream 205694 58945261 ~ 58945334 (+)
G1567394 NA non-coding upstream 5026 58731680 ~ 58732323 (+)
G1567388 NA non-coding upstream 12924 58724215 ~ 58724425 (+)
G1567233 NA non-coding upstream 29389 58684815 ~ 58707960 (+)
G1567196 NA non-coding upstream 35371 58676223 ~ 58701978 (+)
G1567231 NA non-coding upstream 53778 58683261 ~ 58683571 (+)
G1567397 NA non-coding downstream 179 58739746 ~ 58741845 (+)
G1567475 NA non-coding downstream 81669 58821236 ~ 58821556 (+)
G1567515 NA non-coding downstream 129914 58869481 ~ 58870010 (+)
G1567516 NA non-coding downstream 137460 58877027 ~ 58877460 (+)
G1567522 NA non-coding downstream 150836 58890403 ~ 58902491 (+)
G1566445 LOC106588893 other upstream 360343 58364256 ~ 58377006 (+)
G1566224 tbc1d5 other upstream 790586 57941097 ~ 57946763 (+)
LOC110496592 LOC106588883 other upstream 816703 57893854 ~ 57935297 (+)
LOC110496591 LOC106588881 other upstream 874303 57851179 ~ 57870361 (+)
LOC110496571 hoxa7aa other upstream 1625386 57109128 ~ 57112335 (+)
dlx5a dlx5 other downstream 217554 58957121 ~ 58959671 (+)
sem1 shfm1 other downstream 285413 59024919 ~ 59035388 (+)
G1567716 asb4 other downstream 570417 59309984 ~ 59312723 (+)
G1567804 col1a2 other downstream 761606 59501173 ~ 59585317 (+)

Expression


Co-expression Network