nanos2 (LOC106588910)


Basic Information

Item Value
gene id nanos2
gene name LOC106588910
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58823202 ~ 58823929 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572954.2
ATGCGTCCAGGCCACAAACATTATTGATGCAGAGTTCCAGACGCGTGTGCATGATTTCCGGAAAGGTTTCAACAATGCAAAGAAACCTAATGGCTGAGAGCAGCCTCGCCCCAACGCATGATTTCGACATGTGGCATGACTATATGAACCTAGGGAGGCTGCTGGAGAAACTGTGTGACGTCGCAGATCGGACAGCGACCACCTGTACCCAGCTAAAGGAGCACGTGCCGGACGCAAAAGACCACCAGACCGGTCGCCAGGAGCAACAATGGTTTCGTCTGAATTCGATCGGGACTGAGAGTCTGAGTTCTGCAAGCAGCATTTCAGGCAACACGAGCCACAGCCTGGGTTCCGGTGATTACTGCGGCTTCTGCAAGCAAAATGGAGAAACGGCAGAGATCTACCGGAGCCACAAACTGAAATCCAAAGACAGCAAAGTCATCTGCCCCATTCTGAGGAGCTACATTTGTCCTATGTGTGGCGGCACCGGAGACAAAGCTCACACGCGCCGGTACTGCCCACAGCGCAACGGCGTGGTGCCGAAATACCGGGGGACTGTGGAGTAGAAAACAGGAGGAAAATCAATCTGTACATATTTATGGAGAAAATATATCCAACGTTCTTGTTCAGTTAGGTAGACCTATTgttaacatatatattttttacaaagtGGCTAATGCGCCTTTGATGTTCTGCTATGAAAAAAATAAACCTATTTTCGTACATAA

Function

NR:

description
nanos homolog 2

GO:

id name namespace
GO:0003723 RNA binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K18760 NANOS2, NOS2; protein nanos 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572954.2 True 728 mRNA 0.49 1 58823202 58823929

Neighbor

gene id symbol gene type direction distance location
LOC110496610 aunip coding upstream 83635 58737349 ~ 58739567 (+)
LOC118941194 NA coding upstream 437238 58379624 ~ 58386065 (+)
LOC118941196 NA coding upstream 438551 58384103 ~ 58384651 (+)
LOC118941195 NA coding upstream 439152 58383315 ~ 58384050 (+)
LOC118941193 NA coding upstream 439951 58378682 ~ 58383251 (+)
LOC110496618 LOC106588914 coding downstream 40084 58864013 ~ 58873692 (+)
LOC110496619 catsper4 coding downstream 82576 58906505 ~ 58915399 (+)
chrc1 chrc1 coding downstream 94390 58918319 ~ 58922019 (+)
trnaa-ugc-140 NA coding downstream 121332 58945261 ~ 58945334 (+)
dlx5a dlx5 coding downstream 133208 58957121 ~ 58959671 (+)
G1567475 NA non-coding upstream 1646 58821236 ~ 58821556 (+)
G1567397 NA non-coding upstream 81357 58739746 ~ 58741845 (+)
G1567394 NA non-coding upstream 90879 58731680 ~ 58732323 (+)
G1567388 NA non-coding upstream 98777 58724215 ~ 58724425 (+)
G1567233 NA non-coding upstream 115242 58684815 ~ 58707960 (+)
G1567515 NA non-coding downstream 45552 58869481 ~ 58870010 (+)
G1567516 NA non-coding downstream 53098 58877027 ~ 58877460 (+)
G1567522 NA non-coding downstream 66474 58890403 ~ 58902491 (+)
G1567505 LOC106588919 non-coding downstream 100372 58924301 ~ 58925552 (+)
G1567503 NA non-coding downstream 105644 58929573 ~ 58930215 (+)
G1566445 LOC106588893 other upstream 446196 58364256 ~ 58377006 (+)
G1566224 tbc1d5 other upstream 876439 57941097 ~ 57946763 (+)
LOC110496592 LOC106588883 other upstream 902556 57893854 ~ 57935297 (+)
LOC110496591 LOC106588881 other upstream 960156 57851179 ~ 57870361 (+)
LOC110496571 hoxa7aa other upstream 1711239 57109128 ~ 57112335 (+)
sem1 shfm1 other downstream 201051 59024919 ~ 59035388 (+)
G1567716 asb4 other downstream 486055 59309984 ~ 59312723 (+)
G1567804 col1a2 other downstream 677244 59501173 ~ 59585317 (+)

Expression


Co-expression Network