asb4 (asb4)


Basic Information

Item Value
gene id asb4
gene name asb4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 59294237 ~ 59320224 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953399.1
acttcctcccttcctctctctttctagaatcttggtgtggtgtgttgtggacACTGTCACTTCAGTAGGAGACccccagagagggaggggatgtcTATGTGTGTCCGTGTAAGCCTAATACTATCCACTATTCATGACATCATCAGAAGGTGCCTCCATGCCTTGGTGAGAGCAGTAGTAACACCAGAAGAAGAGAAGGGACGGTGGGCCATGGAGGAGCTGCTGACCCCCAGACAACAGACTGCTAGGCAGATCAAGGCCCGTTTCCTGGAGGCCCTACAGACCAACAACGTAACGGAGGTCCTGGAGATACTGTACACCACCAACCTGGACATCGACACTGTGCTGGAGGTGGAGGACAAACGCATGATCCTGGCCTCATACAAGCAAGGTTTCTGGTTGCCAGACTACAAGCTAGAGTGTTCTTGGGCGATGGCCCTCCACGTCTGTGTAATGTACAACTACCTGGAGACAGCTCTGGTGCTGCTGCAGAAGGGGGCGGCGGTTAACAGGAAGCCCAATGGGAAGACCCCGCTTCACGTGGCCTGTACGGTCGCCCACGGCGACTGTGTGGCCCTGTTATTGGGCCACGGGGCGAGGGTCAACAGCCTGTCTCTGAGTGgacacacaccactacactactgtataACTAAAGAGTCTGTGGACTGTGCCAAGCAACTCATCCTTAATGgGGGCAATGTGAACAAGCCCAGTCAGAGCAAAGACGAGGACACACCTTTACACACCGCAGCCCGCCTGGGAATCCCTGAGCTGGTGGCTCTCTACATCTCCCACGGGGCCCAGGTGGATGCGGTCAACTCCCTCCAGGAGACGCCCCTGATCACTGCAGCCTTCTGGGCCCTGGACATCCGTGAACAGACCTACAGCGAGGACCACCACCTGGTCTGCCGCATTCTGCTGGACCACGGCGCAGACCCTAACCTGTATGAAGACGACTATAAGACAGCCCTGCACAAGGCCTCCTGGAACTGTGACCACGTGCTGATGCAGATGCTGCTGGAGGCGGGGGCGGACACTACGACCATGGACATCAATGGCTGTGAACCCATCCAGTATGTCCTGAAGGTCACCTCCGTCAGGCCCATGGCCATCCCTGAGCTCTGTTACCAGCTGCTGCTCAATTTTGGAGCTCCACGGGTCTACCCGCCGCAGTTCCACAAGGTGTTGCAGGCCTGCCATGAGTGTCCCAATGCAGTGGAAGTCATGATGAACTCATATGAGCGCATCAAACCCACCAACaagtggagatcatccattcctGAAGCCTCCTACAAGCAACATGAGGAATTCTATGAGTCCATGTTTGCTGTGTGCTCCAACACTCCTCGTTGTCTGATGCACCTGGCCAGGTGTGCTGTCAGGAGGGCTATGGAGAACCGCTGTCACACTGGGGTAGGgaccctccccctacctccccccaTCCAGAGATACCTGCTACTGGAACCTGAGGGGACCTTCTATTGATGGACTTCTGACTAGGGGAACTCCTCCACCTCGATCTGATATCTAGAAACAACACCAACAACGTTACAGCTCTGTCCCACTCTCTGATCTTCCTGTTGTCTCCCCAAATATCATGGCATAGGACCTACAGAACAACCACGGGAGGAAATCTATGGTACTATGTATTCATACACATTAAACTGTACAGGCTtctacattattattataatatgcattatttatttgtgttggaTGGGCatacactacttttgaacaaATGTATATTGTTGGGGCTCAGAGCTGAATGTTTTCACTGTACTCAATTCAAtggctttattagcatgggaaacatggTAACATTGCCAACGCAactgaagtagataataaacaaagggGGAAAAactaaaattaacagtaaactttACACACAGACGTTCCAAaagaatatagacatttcaaatgtaatgtCTATACTCTCTAATTACTCCTGTGACTATTAAACTTTTCATTTAAAAATAAGTCAATGTACTGCAATGAGCACAATGCATATCATTCGTTGTAAGGGTGAATACTCTGAGCCTGTGTTTACCTTG
>XM_036953400.1
acttcctcccttcctctctctttctagaatcttggtgtggtgtgttgtggacACTGTCACTTCAGTAGGAGACccccagagagggaggggatgtcTATGTGTGTCCGTGTAAGCCTAATACTATCCACTATTCATGACATCATCAGAAGGTGCCTCCATGCCTTGGTGAGAGCAGTAGTAACACCAGAAGAAGAGAAGGGACGGTGGGCCATGGAGGAGCTGCTGACCCCCAGACAACAGACTGCTAGGCAGATCAAGGCCCGTTTCCTGGAGGCCCTACAGACCAACAACGTAACGGAGGTCCTGGAGATACTGTACACCACCAACCTGGACATCGACACTGTGCTGGAGGTGGAGGACAAACGCATGATCCTGGCCTCATACAAGCAAGGTTTCTGGTTGCCAGACTACAAGCTAGAGTGTTCTTGGGCGATGGCCCTCCACGTCTGTGTAATGTACAACTACCTGGAGACAGCTCTGGTGCTGCTGCAGAAGGGGGCGGCGGTTAACAGGAAGCCCAATGGGAAGACCCCGCTTCACGTGGCCTGTACGGTCGCCCACGGCGACTGTGTGGCCCTGTTATTGGGCCACGGGGCGAGGGTCAACAGCCTGTCTCTGAGTGgacacacaccactacactactgtataACTAAAGAGTCTGTGGACTGTGCCAAGCAACTCATCCTTAATGgGGGCAATGTGAACAAGCCCAGTCAGAGCAAAGACGAGGACACACCTTTACACACCGCAGCCCGCCTGGGAATCCCTGAGCTGGTGGCTCTCTACATCTCCCACGGGGCCCAGGTGGATGCGGTCAACTCCCTCCAGGAGACGCCCCTGATCACTGCAGCCTTCTGGGCCCTGGACATCCGTGAACAGACCTACAGCGAGGACCACCACCTGGTCTGCCGCATTCTGCTGGACCACGGCGCAGACCCTAACCTGTATGAAGACGACTATAAGACAGCCCTGCACAAGGCCTCCTGGAACTGTGACCACGTGCTGATGCAGATGCTGCTGGAGGCGGGGGCGGACACTACGACCATGGACATCAATGGCTGTGAACCCATCCAGTATGTCCTGAAGGTCACCTCCGTCAGGCCCATGGCCATCCCTGAGCTCTGTTACCAGCTGCTGCTCAATTTTGGAGCTCCACGGGTCTACCCGCCGCAGTTCCACAAGGTGTTGCAGGCCTGCCATGAGTGTCCCAATGCAGTGGAAGTCATGATGAACTCATATGAGCGCATCAAACCCACCAACaagtggagatcatccattcctGAAGCCTCCTACAAGGGGAACTCCTCCACCTCGATCTGATATCTAGAAACAACACCAACAACGTTACAGCTCTGTCCCACTCTCTGATCTTCCTGTTGTCTCCCCAAATATCATGGCATAGGACCTACAGAACAACCACGGGAGGAAATCTATGGTACTATGTATTCATACACATTAAACTGTACAGGCTtctacattattattataatatgcattatttatttgtgttggaTGGGCatacactacttttgaacaaATGTATATTGTTGGGGCTCAGAGCTGAATGTTTTCACTGTACTCAATTCAAtggctttattagcatgggaaacatggTAACATTGCCAACGCAactgaagtagataataaacaaagggGGAAAAactaaaattaacagtaaactttACACACAGACGTTCCAAaagaatatagacatttcaaatgtaatgtCTATACTCTCTAATTACTCCTGTGACTATTAAACTTTTCATTTAAAAATAAGTCAATGTACTGCAATGAGCACAATGCATATCATTCGTTGTAAGGGTGAATACTCTGAGCCTGTGTTTACCTTG
>XM_036953397.1
acttcctcccttcctctctctttctagaatcttggtgtggtgtgttgtggacACTGTCACTTCAGTAGGAGACccccagagagggaggggatgtcTATGTGTGTCCGTGTAAGCCTAATACTATCCACTATTCATGACATCATCAGAAGGTGCCTCCATGCCTTGGTGAGAGCAGTAGTAACACCAGAAGAAGAGAAGGGACGGTGGGCCATGGAGGAGCTGCTGACCCCCAGACAACAGACTGCTAGGCAGATCAAGGCCCGTTTCCTGGAGGCCCTACAGACCAACAACGTAACGGAGGTCCTGGAGATACTGTACACCACCAACCTGGACATCGACACTGTGCTGGAGGTGGAGGACAAACGCATGATCCTGGCCTCATACAAGCAAGGTTTCTGGTTGCCAGACTACAAGCTAGAGTGTTCTTGGGCGATGGCCCTCCACGTCTGTGTAATGTACAACTACCTGGAGACAGCTCTGGTGCTGCTGCAGAAGGGGGCGGCGGTTAACAGGAAGCCCAATGGGAAGACCCCGCTTCACGTGGCCTGTACGGTCGCCCACGGCGACTGTGTGGCCCTGTTATTGGGCCACGGGGCGAGGGTCAACAGCCTGTCTCTGAGTGgacacacaccactacactactgtataACTAAAGAGTCTGTGGACTGTGCCAAGCAACTCATCCTTAATGgGGGCAATGTGAACAAGCCCAGTCAGAGCAAAGACGAGGACACACCTTTACACACCGCAGCCCGCCTGGGAATCCCTGAGCTGGTGGCTCTCTACATCTCCCACGGGGCCCAGGTGGATGCGGTCAACTCCCTCCAGGAGACGCCCCTGATCACTGCAGCCTTCTGGGCCCTGGACATCCGTGAACAGACCTACAGCGAGGACCACCACCTGGTCTGCCGCATTCTGCTGGACCACGGCGCAGACCCTAACCTGTATGAAGACGACTATAAGACAGCCCTGCACAAGGCCTCCTGGAACTGTGACCACGTGCTGATGCAGATGCTGCTGGAGGCGGGGGCGGACACTACGACCATGGACATCAATGGCTGTGAACCCATCCAGTATGTCCTGAAGGTCACCTCCGTCAGGCCCATGGCCATCCCTGAGCTCTGTTACCAGCTGCTGCTCAATTTTGGAGCTCCACGGGTCTACCCGCCGCAGTTCCACAAGGTGTTGCAGGCCTGCCATGAGTGTCCCAATGCAGTGGAAGTCATGATGAACTCATATGAGCGCATCAAACCCACCAACaagtggagatcatccattcctGAAGCCTCCTACAAGCAACATGAGGAATTCTATGAGTCCATGTTTGCTGTGTGCTCCAACACTCCTCGTTGTCTGATGCACCTGGCCAGGTGTGCTGTCAGGAGGGCTATGGAGAACCGCTGTCACACTGGGGTAGGgaccctccccctacctccccccaTCCAGAGATACCTGCTACTGGAACCTGAGGGGACCTTCTATTGATGGACTTCTGACTAGGTGTTTGGCTGAATGATCTACCTTTAGAGAACAGCTACCCTGAGTGATACAAGAGACAGTATCTGATGCTATTGGTAGTAGTATATATGGTGGGTAGTTTAGGTTAGTTAGTGCTTAACTAGGTGCACAGGTATACAGCACACTGCCACTTCCACACTCTATCCCTAGGTGGCAGCAGCAACCGGGTCAGGTGCTAAGCTCTGCCAGGAAGCCTCGATAAACAGTGGATTGCTCCCAGGCGGGGGCAATAAGTGACTGCAGGTGATTGCAAAGAGGGAGGTTGGCCAGCCAGCGTTTGTGTAAAAACTTGTTGTGGGCCTTTTGTATATTATTTTGTATATCACTACTTGAACGAATGCCAACCACAAGTATAGAGTTGAGACAGAGATCGACCTGAACTTGGTAAGTTTGCTGTCTCCTCGGACACAGGTATTCAACACCTGGCCCGCTTAGTCTTTCTTCTCATGTTAATACACACATTTAGATAAATGACAGATCATTTAGCCAagcctaggacccctagacatagaGTGTAGTGATAAAGGAAGTCTAGCCAGGTGCTTTCCTAACACTATCACTTAGGTCCAGTCATTGAAACaggaaataaaacataaaaaaactgTACTAAGAGATGCTGTAGCTgaaagtggaaccaaaagagatgACGATAGCACTGCCTAGCAGTCGAGGCTAACACTGGGTCAAACACACTGACTGGATATCCTGATCTTACCGTAGACTGCAGTCTATTGTGATAATGACATATGAGGACATTGGTCTTCTTTAGCCCGACGTGGTGGATTAATGGATGTCTGTTTGacagatggatgaatggatgtaTCAGTCTGACAGCTGAAGCTTCTTTCAGACATTAATACTGGATGTCCTGGTCTATGATGTCACTTGTTGGTGTGACACCAAGGATCCACTGCAGCACTgtctgactccctccctccctccctccctccct

Function

symbol description
asb4 Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within intracellular signal transduction. Orthologous to human ASB4 (ankyrin repeat and SOCS box containing 4).

NR:

description
PREDICTED: ankyrin repeat and SOCS box protein 4 isoform X1

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process

KEGG:

id description
K10326 ASB4; ankyrin repeat and SOCS box protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953399.1 False 2057 mRNA 0.51 7 59294237 59320224
XM_036953400.1 False 1853 mRNA 0.50 6 59294237 59320224
XM_036953397.1 True 2470 mRNA 0.52 6 59308364 59320224

Neighbor

gene id symbol gene type direction distance location
LOC118940999 NA coding downstream 12973 59163574 ~ 59281264 (-)
LOC110496627 LOC106588646 coding downstream 233326 59060343 ~ 59060911 (-)
dlx6a dlx6 coding downstream 328106 58962944 ~ 58966131 (-)
ago2 LOC106570475 coding downstream 341745 58934268 ~ 58952492 (-)
si:ch211-57n23.1 LOC106588919 coding downstream 367749 58922028 ~ 58926488 (-)
ppp1r9a ppp1r9a coding upstream 2400 59322624 ~ 59441836 (-)
casd1 casd1 coding upstream 152944 59473168 ~ 59487287 (-)
col1a2 col1a2 coding upstream 180944 59501168 ~ 59525014 (-)
zgc:85777 ivd coding upstream 327724 59647948 ~ 59696386 (-)
LOC110496639 NA coding upstream 353450 59673674 ~ 59679024 (-)
G1568035 NA non-coding downstream 21017 59194899 ~ 59273220 (-)
G1568027 NA non-coding downstream 113489 59180098 ~ 59180748 (-)
G1568021 NA non-coding downstream 126048 59167947 ~ 59168189 (-)
G1567979 NA non-coding downstream 203538 59090009 ~ 59090699 (-)
G1567944 shfm1 non-coding downstream 258899 59025022 ~ 59035338 (-)
G1568121 NA non-coding upstream 49351 59369575 ~ 59371107 (-)
G1568122 NA non-coding upstream 50373 59370597 ~ 59374480 (-)
G1568136 NA non-coding upstream 79829 59400053 ~ 59400923 (-)
G1568395 gng11 non-coding upstream 375605 59695829 ~ 59738616 (-)
G1568438 NA non-coding upstream 437416 59757640 ~ 59760282 (-)
G1568017 NA other downstream 137193 59155028 ~ 59157044 (-)
G1567931 NA other downstream 219589 59004845 ~ 59074648 (-)
G1567871 LOC106588914 other downstream 420546 58870937 ~ 58873691 (-)
G1567875 NA other downstream 424230 58869363 ~ 58870007 (-)
G1567080 NA other downstream 883108 58410499 ~ 58411129 (-)
LOC110496637 gng11 other upstream 408955 59712624 ~ 59738593 (-)
G1569198 NA other upstream 921707 60241931 ~ 60251369 (-)
G1569258 NA other upstream 1028552 60348776 ~ 60350759 (-)
G1569277 NA other upstream 1059629 60379853 ~ 60389092 (-)
LOC110496651 NA other upstream 1290263 60610487 ~ 60642154 (-)

Expression


Co-expression Network