sgce (sgce)


Basic Information

Item Value
gene id sgce
gene name sgce
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 59439776 ~ 59472172 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572642.2
GTTATGTTGGTCACGCAAGGTCAATAGAACATGCGCATAATTTTGGAAGAAAGgaacagagcgagagaaaaagagagagagtttgttAATTTATTAGATTATCTAAATTAAAATAGTGATGATGTTTACAATTGGTGAAATTGCATCACACCCGTTTTTATGATAGGCGTTATGATACCCATTTGATAGAGTGCGGGAATGATATTTTCCAGCTTCTGCGCCAGATGTACCGACCAATGAAAGCGCGAGCGTTCGAATGAGGAGGCGGAGGCTGGAGTTTCATGGATGCTTGTTATGTCTGTCAAACCACTAGCGATTAGAAAAATATAGATTTTCCTATAAAAAAATAACCATTCGCAAATGCAATATGGATACTGCGGTTGTTGTCGTATGGCTTTCTATGGTGATTACCATCCTGTCGAGGTCGCACGCCGACCGGAACGTCTACCCGTCTGCAGGCGTGCTGTTTGTCCATGTCCTGGAGAGAGAACACTTCAAAGGAGAGTTTcccccctatcccaaacctgGGGATTCCAGCAACGACCCCATCACCTTCAACACCAACCTGATGGGCTACCCAGACCGGCCAGGCTGGCTGCGGTACATCCAGAGAACCTCACACAGCGATGGGGTGCTCTACGGATCCCCCACTGCAGAACACGTGGGCAAGGCCACCATCATAGAGATTACTGCCTATAACAGACGCACTTTCGAAACGGCCCGGCACAACTTGGTCATAAACATCATGTCCACGGAAgactACCCACTGCCATACCAGGCAGAGTTCTTCATAAAGAACATGAATGTGGAGGAGATGTTGGCCAGCGAGGTTCTGGGAGACTTCCTTGGCGCAGTGAAGAACGTGTGGCAGCCCGAACGCCTCAACGCCATCAACATCACCTCAGCGCTGGACAGGGGCGGACGTGTTCCCCTGCCCATAAACAACCTCAAAGAGGGTGTGTATGTGATGGTGGGGGCAGACGTGCAGTTCTCTTCCTGCCTGAGGGAGGTGGAGAACCCCCACAACCAGCTGCGCTGCAGCCAGGAGATGGAGCCTGTCATCAGCTGTGACAAGAAGTTCAGGGCCCAGTTCGACATTGACTGGTGCAAGATCAACCTGgtGGACATCACCAAGGTGGTCACGATCCACAGTAACCGTCCGGACCCAGGTACAGGGGTTCTGCCTGACATCGGGGAGTACAACCCCCCATCAGAGTCTCTGAAGAGCAGGGACTTCTTTGCCGACTTCCTCATCACGTTGGCAGTGCCCTCGGCCGTGGCCATGGTCCTCTTCACCATCCTGGGTTACTCCATGTGCTGCCGGCGAGAAGGGGTGGATAAAAGAAACATGCAAACACCAGAtaTCCAGTtagtacatcacagctccatccAAAAGTCGACCAAGGAGCTGCGGAGCATGTCTAAGAACAGGGAGATCTCCTGGCCCCTCTCCACCCTGCCTGTCTTCAGCCAAAGTGGGGAGGTGGTGCCCCCCATACACCCAGACAACTACGAGACAACCAGCATGCCGCTGATGCAGACACAGACAAACCTGCAGAACCAGATTCAGATACCACAGCAACAGCCATCAGGAGATAGAGATAATTATTGTATGTCAACATTTCGGAGACTGGAGGTAAATGGTATTCCTGAGGAGAGGAAAGTGGCTGAAGCACTGAACTTGTGACAAGAGAGAAGCCCAAGAGACAGTGGTGGAGCTGCTATCTGTCTGTCCGTGTCCCTTTAAGCCAAGTGTTTTTCTATGTCTACATCctatatagagtaccacagtatgagtcataatagaCATCAAACCTAGCGGTCAAATAGGGAAACGGTTCCAATCGTTtatccaccattcatttttcccataggggattttagaaacacttataataagggctgtgtttcatgtaggcttaccctggtgtgacatgttgataaccgtgtaaatctctctaggacattTGTAGTTTTGCATTATGTCTACTTTGACCCaaattagcattttcgaatctgagagtaGAGCCAAATaaattgataaaagtcaccttatCCTAGAGAGATTTTattggttatcaaaatgtcacaccaGGGAAAGCCTACATGAAACAGTCCTTATTTAAAGTGTTTTGAAAATCccatatgggaaaaatgaatggtagcAAAAGGATTGGAAGCATCACCCCGTTTGACcgttaggttttatgggtattatgacacctccattgTGGGGCTCTATACCCAATTTCCTGCAcaacttctgaccagggcccagagaCACTACGTCTGTCCCAATCTGCATGCCCCAGCAGTACGTTCATACTCAACGCTAGTGTCCGTCAGTGTGCCCTTATGTATGTGAGCGAGTGGTGCAGAGTACAGTAAACTCATGATAAGTGCACTTAGTATGAGAGCAAGCTGATTAAGTGCAGTCCCAATTCAATTACACTCATAACTGTGTGCTCTTATTTAATGCACACGGTCACCACAATCCTAAACAGCTGCATTTATCAGTagtcgactgtgtgtgtgtataccagcCTGATCATGAATAACAAATGCTACATTCATAGGATATTTAGAAATATTTTGTGCATATGTTCTAGAAATTATATGATGCCATTAACAATATCATGTTAGTATTTTACTTTCCATGCACAATGCTCATATTTAGAGGGAAACGGAGATGGACAGAGACGCTCGTCAAGtccaatcaaataaaaatgtaaatgctAATTTTCTGTCATATAACAGTAAAAATAAGTTTGGTTTAAGTTTGCTGTCAATTGTGTTCAACGGCTGCAACTGTAGCACCAGGCCCCCAGCACACGCATTATAGTAATCTGTTAAGCCCATCTGTGGAAGGTCAGAAGGGCCCACTCGCTCTCCCCGGGTCATTTGTTTTCAGGGGTTGGAtgagctttaatattgcagataggttgttgcttccatcaatgtattgtctgcatcatttccaatcccccagatatgtttttatatacacacacattcattttgtttttagaatatacctttattattccccacaaaccctaccacccttccccaattggagtaaactaataaacaatctaccttcagtttatacatacaATACACATTTCACAGAAATTATATTTGGTTTGTTTTTAGGCCTGGCCTTTATTtgtgatgtccatccagtttggtTTCTATTTGTAACTGCTATTTCACAaagtatatacattttacagaccccgtatgttttacattggttatcttgttattagtcccacccttcagctccattcaacccctcccatcttgctcttaacaccatccattttgcATTTCTATtcgccatatatttttcaactgtgctgtgatgcttcacgaaataactgaacctttctattctcatagctttaaaataaaatgtttggcTAAAAtgattattgatcgattgactgacttttcaaatcacccagtaatgctatctgcagcgttagttctaggtaaatgttgcaattcttcagccattcctggacctgtaaccaaaaacgagctacagcTGGACAGTACCAAACTAAATAATCTAATACCTGCCTcatcacagcaaaatctgcataGCTGGGAAGATATCTCAATATCTctcattctattggttgcaagaatatTGTAGAATAATGTACATTTTTGAAAGTTTGTAAAGTTTTGAATCTCTCCAGGTTGTTGCATTAGTTACTTCCTTAACCCCGCTCATCCTTGGTGGGACATAAAACGGCAAACATCTTCTACCACTGGACCCGTCTTCCAGCTCAGCCACCACTGTCCGTCGCCATGACATTTTTAGTCTGCCTCACATGCACTTTCTTGCTGGTGTTCACCTGAGGGCAACTTTGTGTTTTTTATCTCTGCATTAACACTATGGAAAATCTCCATTGAGCATTATTTCAGTCCAGGACGAGGCTTAacctgtgtctgggaaactggccctcaCTGTTTTGACAAGGAAGGGACAAAGAAGTCAGACAAGATTTTTAGGAAGGTTTGTATTATTGACAATGTAGAATACAAATAAAAAGTATCTATAAATAAAATGGGTACAACTCACATTAAAATGTCACAAAATAATATAAATGTACATAAAACATATATTGAGGCTCTGGGGTGAACCTAGTTGTTGCTTCTTTCAATTTGAACCAAAACCAATTTAAAAAGATATATCCCCAATAGTGAATAACATATAGAAAATCAAAATACTgtaaatcaaaatagattttgttTGCCTATCAAAATGTTTCTCAGATGGAAAAACAGGTTGACACTGAACAAGATTCTGTATAATTGCCATCCTTTTGCCAACATTCTTCATTAATAAATCAATTCATCaaaa
>XM_021572643.2
GTTATGTTGGTCACGCAAGGTCAATAGAACATGCGCATAATTTTGGAAGAAAGgaacagagcgagagaaaaagagagagagtttgttAATTTATTAGATTATCTAAATTAAAATAGTGATGATGTTTACAATTGGTGAAATTGCATCACACCCGTTTTTATGATAGGCGTTATGATACCCATTTGATAGAGTGCGGGAATGATATTTTCCAGCTTCTGCGCCAGATGTACCGACCAATGAAAGCGCGAGCGTTCGAATGAGGAGGCGGAGGCTGGAGTTTCATGGATGCTTGTTATGTCTGTCAAACCACTAGCGATTAGAAAAATATAGATTTTCCTATAAAAAAATAACCATTCGCAAATGCAATATGGATACTGCGGTTGTTGTCGTATGGCTTTCTATGGTGATTACCATCCTGTCGAGGTCGCACGCCGACCGGAACGTCTACCCGTCTGCAGGCGTGCTGTTTGTCCATGTCCTGGAGAGAGAACACTTCAAAGGAGAGTTTcccccctatcccaaacctgGGGATTCCAGCAACGACCCCATCACCTTCAACACCAACCTGATGGGCTACCCAGACCGGCCAGGCTGGCTGCGGTACATCCAGAGAACCTCACACAGCGATGGGGTGCTCTACGGATCCCCCACTGCAGAACACGTGGGCAAGGCCACCATCATAGAGATTACTGCCTATAACAGACGCACTTTCGAAACGGCCCGGCACAACTTGGTCATAAACATCATGTCCACGGAAgactACCCACTGCCATACCAGGCAGAGTTCTTCATAAAGAACATGAATGTGGAGGAGATGTTGGCCAGCGAGGTTCTGGGAGACTTCCTTGGCGCAGTGAAGAACGTGTGGCAGCCCGAACGCCTCAACGCCATCAACATCACCTCAGCGCTGGACAGGGGCGGACGTGTTCCCCTGCCCATAAACAACCTCAAAGAGGGTGTGTATGTGATGGTGGGGGCAGACGTGCAGTTCTCTTCCTGCCTGAGGGAGGTGGAGAACCCCCACAACCAGCTGCGCTGCAGCCAGGAGATGGAGCCTGTCATCAGCTGTGACAAGAAGTTCAGGGCCCAGTTCGACATTGACTGGTGCAAGATCAACCTGgtGGACATCACCAAGGTGGTCACGATCCACAGTAACCGTCCGGACCCAGGTACAGGGGTTCTGCCTGACATCGGGGAGTACAACCCCCCATCAGAGTCTCTGAAGAGCAGGGACTTCTTTGCCGACTTCCTCATCACGTTGGCAGTGCCCTCGGCCGTGGCCATGGTCCTCTTCACCATCCTGGGTTACTCCATGTGCTGCCGGCGAGAAGGGGTtaTCCAGTtagtacatcacagctccatccAAAAGTCGACCAAGGAGCTGCGGAGCATGTCTAAGAACAGGGAGATCTCCTGGCCCCTCTCCACCCTGCCTGTCTTCAGCCAAAGTGGGGAGGTGGTGCCCCCCATACACCCAGACAACTACGAGACAACCAGCATGCCGCTGATGCAGACACAGACAAACCTGCAGAACCAGATTCAGATACCACAGCAACAGCCATCAGGAGATAGAGATAATTATTGTATGTCAACATTTCGGAGACTGGAGGTAAATGGTATTCCTGAGGAGAGGAAAGTGGCTGAAGCACTGAACTTGTGACAAGAGAGAAGCCCAAGAGACAGTGGTGGAGCTGCTATCTGTCTGTCCGTGTCCCTTTAAGCCAAGTGTTTTTCTATGTCTACATCctatatagagtaccacagtatgagtcataatagaCATCAAACCTAGCGGTCAAATAGGGAAACGGTTCCAATCGTTtatccaccattcatttttcccataggggattttagaaacacttataataagggctgtgtttcatgtaggcttaccctggtgtgacatgttgataaccgtgtaaatctctctaggacattTGTAGTTTTGCATTATGTCTACTTTGACCCaaattagcattttcgaatctgagagtaGAGCCAAATaaattgataaaagtcaccttatCCTAGAGAGATTTTattggttatcaaaatgtcacaccaGGGAAAGCCTACATGAAACAGTCCTTATTTAAAGTGTTTTGAAAATCccatatgggaaaaatgaatggtagcAAAAGGATTGGAAGCATCACCCCGTTTGACcgttaggttttatgggtattatgacacctccattgTGGGGCTCTATACCCAATTTCCTGCAcaacttctgaccagggcccagagaCACTACGTCTGTCCCAATCTGCATGCCCCAGCAGTACGTTCATACTCAACGCTAGTGTCCGTCAGTGTGCCCTTATGTATGTGAGCGAGTGGTGCAGAGTACAGTAAACTCATGATAAGTGCACTTAGTATGAGAGCAAGCTGATTAAGTGCAGTCCCAATTCAATTACACTCATAACTGTGTGCTCTTATTTAATGCACACGGTCACCACAATCCTAAACAGCTGCATTTATCAGTagtcgactgtgtgtgtgtataccagcCTGATCATGAATAACAAATGCTACATTCATAGGATATTTAGAAATATTTTGTGCATATGTTCTAGAAATTATATGATGCCATTAACAATATCATGTTAGTATTTTACTTTCCATGCACAATGCTCATATTTAGAGGGAAACGGAGATGGACAGAGACGCTCGTCAAGtccaatcaaataaaaatgtaaatgctAATTTTCTGTCATATAACAGTAAAAATAAGTTTGGTTTAAGTTTGCTGTCAATTGTGTTCAACGGCTGCAACTGTAGCACCAGGCCCCCAGCACACGCATTATAGTAATCTGTTAAGCCCATCTGTGGAAGGTCAGAAGGGCCCACTCGCTCTCCCCGGGTCATTTGTTTTCAGGGGTTGGAtgagctttaatattgcagataggttgttgcttccatcaatgtattgtctgcatcatttccaatcccccagatatgtttttatatacacacacattcattttgtttttagaatatacctttattattccccacaaaccctaccacccttccccaattggagtaaactaataaacaatctaccttcagtttatacatacaATACACATTTCACAGAAATTATATTTGGTTTGTTTTTAGGCCTGGCCTTTATTtgtgatgtccatccagtttggtTTCTATTTGTAACTGCTATTTCACAaagtatatacattttacagaccccgtatgttttacattggttatcttgttattagtcccacccttcagctccattcaacccctcccatcttgctcttaacaccatccattttgcATTTCTATtcgccatatatttttcaactgtgctgtgatgcttcacgaaataactgaacctttctattctcatagctttaaaataaaatgtttggcTAAAAtgattattgatcgattgactgacttttcaaatcacccagtaatgctatctgcagcgttagttctaggtaaatgttgcaattcttcagccattcctggacctgtaaccaaaaacgagctacagcTGGACAGTACCAAACTAAATAATCTAATACCTGCCTcatcacagcaaaatctgcataGCTGGGAAGATATCTCAATATCTctcattctattggttgcaagaatatTGTAGAATAATGTACATTTTTGAAAGTTTGTAAAGTTTTGAATCTCTCCAGGTTGTTGCATTAGTTACTTCCTTAACCCCGCTCATCCTTGGTGGGACATAAAACGGCAAACATCTTCTACCACTGGACCCGTCTTCCAGCTCAGCCACCACTGTCCGTCGCCATGACATTTTTAGTCTGCCTCACATGCACTTTCTTGCTGGTGTTCACCTGAGGGCAACTTTGTGTTTTTTATCTCTGCATTAACACTATGGAAAATCTCCATTGAGCATTATTTCAGTCCAGGACGAGGCTTAacctgtgtctgggaaactggccctcaCTGTTTTGACAAGGAAGGGACAAAGAAGTCAGACAAGATTTTTAGGAAGGTTTGTATTATTGACAATGTAGAATACAAATAAAAAGTATCTATAAATAAAATGGGTACAACTCACATTAAAATGTCACAAAATAATATAAATGTACATAAAACATATATTGAGGCTCTGGGGTGAACCTAGTTGTTGCTTCTTTCAATTTGAACCAAAACCAATTTAAAAAGATATATCCCCAATAGTGAATAACATATAGAAAATCAAAATACTgtaaatcaaaatagattttgttTGCCTATCAAAATGTTTCTCAGATGGAAAAACAGGTTGACACTGAACAAGATTCTGTATAATTGCCATCCTTTTGCCAACATTCTTCATTAATAAATCAATTCATCaaaa
>XM_021572645.2
TTATGTTGGTCACGCAAGGTCAATAGAACATGCGCATAATTTTGGAAGAAAGgaacagagcgagagaaaaagagagagagtttgttAATTTATTAGATTATCTAAATTAAAATAGTGATGATGTTTACAATTGGTGAAATTGCATCACACCCGTTTTTATGATAGGCGTTATGATACCCATTTGATAGAGTGCGGGAATGATATTTTCCAGCTTCTGCGCCAGATGTACCGACCAATGAAAGCGCGAGCGTTCGAATGAGGAGGCGGAGGCTGGAGTTTCATGGATGCTTGTTATGTCTGTCAAACCACTAGCGATTAGAAAAATATAGATTTTCCTATAAAAAAATAACCATTCGCAAATGCAATATGGATACTGCGGTTGTTGTCGTATGGCTTTCTATGGTGATTACCATCCTGTCGAGGTCGCACGCCGACCGGAACGTCTACCCGTCTGCAGGCGTGCTGTTTGTCCATGTCCTGGAGAGAGAACACTTCAAAGGAGAGTTTcccccctatcccaaacctgGGGATTCCAGCAACGACCCCATCACCTTCAACACCAACCTGATGGGCTACCCAGACCGGCCAGGCTGGCTGCGGTACATCCAGAGAACCTCACACAGCGATGGGGTGCTCTACGGATCCCCCACTGCAGAACACGTGGGCAAGGCCACCATCATAGAGATTACTGCCTATAACAGACGCACTTTCGAAACGGCCCGGCACAACTTGGTCATAAACATCATGTCCACGGAAgactACCCACTGCCATACCAGGCAGAGTTCTTCATAAAGAACATGAATGTGGAGGAGATGTTGGCCAGCGAGGTTCTGGGAGACTTCCTTGGCGCAGTGAAGAACGTGTGGCAGCCCGAACGCCTCAACGCCATCAACATCACCTCAGCGCTGGACAGGGGCGGACGTGTTCCCCTGCCCATAAACAACCTCAAAGAGGGTGTGTATGTGATGGTGGGGGCAGACGTGCAGTTCTCTTCCTGCCTGAGGGAGGTGGAGAACCCCCACAACCAGCTGCGCTGCAGCCAGGAGATGGAGCCTGTCATCAGCTGTGACAAGAAGTTCAGGGCCCAGTTCGACATTGACTGGTGCAAGATCAACCTGgtGGACATCACCAAGGTGGTCACGATCCACAGTAACCGTCCGGACCCAGGTACAGGGGTTCTGCCTGACATCGGGGAGTACAACCCCCCATCAGAGTCTCTGAAGAGCAGGGACTTCTTTGCCGACTTCCTCATCACGTTGGCAGTGCCCTCGGCCGTGGCCATGGTCCTCTTCACCATCCTGGGTTACTCCATGTGCTGCCGGCGAGAAGGGGTGGATAAAAGAAACATGCAAACACCAGAtaTCCAGTtagtacatcacagctccatccAAAAGTCGACCAAGGAGCTGCGGAGCATGTCTAAGAACAGGGAGATCTCCTGGCCCCTCTCCACCCTGCCTGTCTTCAGCCAAAGTGGGGAGGTGGTGCCCCCCATACACCCAGACAACTACGAGACAACCAGCATGCCGCTGATGCAGACACAGACAAACCTGCAGAACCAGATTCAGATACCACAGCAACAGCCATCAGGTAAATGGTATTCCTGAGGAGAGGAAAGTGGCTGAAGCACTGAACTTGTGACAAGAGAGAAGCCCAAGAGACAGTGGTGGAGCTGCTATCTGTCTGTCCGTGTCCCTTTAAGCCAAGTGTTTTTCTATGTCTACATCctatatagagtaccacagtatgagtcataatagaCATCAAACCTAGCGGTCAAATAGGGAAACGGTTCCAATCGTTtatccaccattcatttttcccataggggattttagaaacacttataataagggctgtgtttcatgtaggcttaccctggtgtgacatgttgataaccgtgtaaatctctctaggacattTGTAGTTTTGCATTATGTCTACTTTGACCCaaattagcattttcgaatctgagagtaGAGCCAAATaaattgataaaagtcaccttatCCTAGAGAGATTTTattggttatcaaaatgtcacaccaGGGAAAGCCTACATGAAACAGTCCTTATTTAAAGTGTTTTGAAAATCccatatgggaaaaatgaatggtagcAAAAGGATTGGAAGCATCACCCCGTTTGACcgttaggttttatgggtattatgacacctccattgTGGGGCTCTATACCCAATTTCCTGCAcaacttctgaccagggcccagagaCACTACGTCTGTCCCAATCTGCATGCCCCAGCAGTACGTTCATACTCAACGCTAGTGTCCGTCAGTGTGCCCTTATGTATGTGAGCGAGTGGTGCAGAGTACAGTAAACTCATGATAAGTGCACTTAGTATGAGAGCAAGCTGATTAAGTGCAGTCCCAATTCAATTACACTCATAACTGTGTGCTCTTATTTAATGCACACGGTCACCACAATCCTAAACAGCTGCATTTATCAGTagtcgactgtgtgtgtgtataccagcCTGATCATGAATAACAAATGCTACATTCATAGGATATTTAGAAATATTTTGTGCATATGTTCTAGAAATTATATGATGCCATTAACAATATCATGTTAGTATTTTACTTTCCATGCACAATGCTCATATTTAGAGGGAAACGGAGATGGACAGAGACGCTCGTCAAGtccaatcaaataaaaatgtaaatgctAATTTTCTGTCATATAACAGTAAAAATAAGTTTGGTTTAAGTTTGCTGTCAATTGTGTTCAACGGCTGCAACTGTAGCACCAGGCCCCCAGCACACGCATTATAGTAATCTGTTAAGCCCATCTGTGGAAGGTCAGAAGGGCCCACTCGCTCTCCCCGGGTCATTTGTTTTCAGGGGTTGGAtgagctttaatattgcagataggttgttgcttccatcaatgtattgtctgcatcatttccaatcccccagatatgtttttatatacacacacattcattttgtttttagaatatacctttattattccccacaaaccctaccacccttccccaattggagtaaactaataaacaatctaccttcagtttatacatacaATACACATTTCACAGAAATTATATTTGGTTTGTTTTTAGGCCTGGCCTTTATTtgtgatgtccatccagtttggtTTCTATTTGTAACTGCTATTTCACAaagtatatacattttacagaccccgtatgttttacattggttatcttgttattagtcccacccttcagctccattcaacccctcccatcttgctcttaacaccatccattttgcATTTCTATtcgccatatatttttcaactgtgctgtgatgcttcacgaaataactgaacctttctattctcatagctttaaaataaaatgtttggcTAAAAtgattattgatcgattgactgacttttcaaatcacccagtaatgctatctgcagcgttagttctaggtaaatgttgcaattcttcagccattcctggacctgtaaccaaaaacgagctacagcTGGACAGTACCAAACTAAATAATCTAATACCTGCCTcatcacagcaaaatctgcataGCTGGGAAGATATCTCAATATCTctcattctattggttgcaagaatatTGTAGAATAATGTACATTTTTGAAAGTTTGTAAAGTTTTGAATCTCTCCAGGTTGTTGCATTAGTTACTTCCTTAACCCCGCTCATCCTTGGTGGGACATAAAACGGCAAACATCTTCTACCACTGGACCCGTCTTCCAGCTCAGCCACCACTGTCCGTCGCCATGACATTTTTAGTCTGCCTCACATGCACTTTCTTGCTGGTGTTCACCTGAGGGCAACTTTGTGTTTTTTATCTCTGCATTAACACTATGGAAAATCTCCATTGAGCATTATTTCAGTCCAGGACGAGGCTTAacctgtgtctgggaaactggccctcaCTGTTTTGACAAGGAAGGGACAAAGAAGTCAGACAAGATTTTTAGGAAGGTTTGTATTATTGACAATGTAGAATACAAATAAAAAGTATCTATAAATAAAATGGGTACAACTCACATTAAAATGTCACAAAATAATATAAATGTACATAAAACATATATTGAGGCTCTGGGGTGAACCTAGTTGTTGCTTCTTTCAATTTGAACCAAAACCAATTTAAAAAGATATATCCCCAATAGTGAATAACATATAGAAAATCAAAATACTgtaaatcaaaatagattttgttTGCCTATCAAAATGTTTCTCAGATGGAAAAACAGGTTGACACTGAACAAGATTCTGTATAATTGCCATCCTTTTGCCAACATTCTTCATTAATAAATCAATTCATCaaaa
>XM_021572646.2
TTATGTTGGTCACGCAAGGTCAATAGAACATGCGCATAATTTTGGAAGAAAGgaacagagcgagagaaaaagagagagagtttgttAATTTATTAGATTATCTAAATTAAAATAGTGATGATGTTTACAATTGGTGAAATTGCATCACACCCGTTTTTATGATAGGCGTTATGATACCCATTTGATAGAGTGCGGGAATGATATTTTCCAGCTTCTGCGCCAGATGTACCGACCAATGAAAGCGCGAGCGTTCGAATGAGGAGGCGGAGGCTGGAGTTTCATGGATGCTTGTTATGTCTGTCAAACCACTAGCGATTAGAAAAATATAGATTTTCCTATAAAAAAATAACCATTCGCAAATGCAATATGGATACTGCGGTTGTTGTCGTATGGCTTTCTATGGTGATTACCATCCTGTCGAGGTCGCACGCCGACCGGAACGTCTACCCGTCTGCAGGCGTGCTGTTTGTCCATGTCCTGGAGAGAGAACACTTCAAAGGAGAGTTTcccccctatcccaaacctgGGGATTCCAGCAACGACCCCATCACCTTCAACACCAACCTGATGGGCTACCCAGACCGGCCAGGCTGGCTGCGGTACATCCAGAGAACCTCACACAGCGATGGGGTGCTCTACGGATCCCCCACTGCAGAACACGTGGGCAAGGCCACCATCATAGAGATTACTGCCTATAACAGACGCACTTTCGAAACGGCCCGGCACAACTTGGTCATAAACATCATGTCCACGGAAgactACCCACTGCCATACCAGGCAGAGTTCTTCATAAAGAACATGAATGTGGAGGAGATGTTGGCCAGCGAGGTTCTGGGAGACTTCCTTGGCGCAGTGAAGAACGTGTGGCAGCCCGAACGCCTCAACGCCATCAACATCACCTCAGCGCTGGACAGGGGCGGACGTGTTCCCCTGCCCATAAACAACCTCAAAGAGGGTGTGTATGTGATGGTGGGGGCAGACGTGCAGTTCTCTTCCTGCCTGAGGGAGGTGGAGAACCCCCACAACCAGCTGCGCTGCAGCCAGGAGATGGAGCCTGTCATCAGCTGTGACAAGAAGTTCAGGGCCCAGTTCGACATTGACTGGTGCAAGATCAACCTGgtGGACATCACCAAGGTGGTCACGATCCACAGTAACCGTCCGGACCCAGGTACAGGGGTTCTGCCTGACATCGGGGAGTACAACCCCCCATCAGAGTCTCTGAAGAGCAGGGACTTCTTTGCCGACTTCCTCATCACGTTGGCAGTGCCCTCGGCCGTGGCCATGGTCCTCTTCACCATCCTGGGTTACTCCATGTGCTGCCGGCGAGAAGGGGTtaTCCAGTtagtacatcacagctccatccAAAAGTCGACCAAGGAGCTGCGGAGCATGTCTAAGAACAGGGAGATCTCCTGGCCCCTCTCCACCCTGCCTGTCTTCAGCCAAAGTGGGGAGGTGGTGCCCCCCATACACCCAGACAACTACGAGACAACCAGCATGCCGCTGATGCAGACACAGACAAACCTGCAGAACCAGATTCAGATACCACAGCAACAGCCATCAGGTAAATGGTATTCCTGAGGAGAGGAAAGTGGCTGAAGCACTGAACTTGTGACAAGAGAGAAGCCCAAGAGACAGTGGTGGAGCTGCTATCTGTCTGTCCGTGTCCCTTTAAGCCAAGTGTTTTTCTATGTCTACATCctatatagagtaccacagtatgagtcataatagaCATCAAACCTAGCGGTCAAATAGGGAAACGGTTCCAATCGTTtatccaccattcatttttcccataggggattttagaaacacttataataagggctgtgtttcatgtaggcttaccctggtgtgacatgttgataaccgtgtaaatctctctaggacattTGTAGTTTTGCATTATGTCTACTTTGACCCaaattagcattttcgaatctgagagtaGAGCCAAATaaattgataaaagtcaccttatCCTAGAGAGATTTTattggttatcaaaatgtcacaccaGGGAAAGCCTACATGAAACAGTCCTTATTTAAAGTGTTTTGAAAATCccatatgggaaaaatgaatggtagcAAAAGGATTGGAAGCATCACCCCGTTTGACcgttaggttttatgggtattatgacacctccattgTGGGGCTCTATACCCAATTTCCTGCAcaacttctgaccagggcccagagaCACTACGTCTGTCCCAATCTGCATGCCCCAGCAGTACGTTCATACTCAACGCTAGTGTCCGTCAGTGTGCCCTTATGTATGTGAGCGAGTGGTGCAGAGTACAGTAAACTCATGATAAGTGCACTTAGTATGAGAGCAAGCTGATTAAGTGCAGTCCCAATTCAATTACACTCATAACTGTGTGCTCTTATTTAATGCACACGGTCACCACAATCCTAAACAGCTGCATTTATCAGTagtcgactgtgtgtgtgtataccagcCTGATCATGAATAACAAATGCTACATTCATAGGATATTTAGAAATATTTTGTGCATATGTTCTAGAAATTATATGATGCCATTAACAATATCATGTTAGTATTTTACTTTCCATGCACAATGCTCATATTTAGAGGGAAACGGAGATGGACAGAGACGCTCGTCAAGtccaatcaaataaaaatgtaaatgctAATTTTCTGTCATATAACAGTAAAAATAAGTTTGGTTTAAGTTTGCTGTCAATTGTGTTCAACGGCTGCAACTGTAGCACCAGGCCCCCAGCACACGCATTATAGTAATCTGTTAAGCCCATCTGTGGAAGGTCAGAAGGGCCCACTCGCTCTCCCCGGGTCATTTGTTTTCAGGGGTTGGAtgagctttaatattgcagataggttgttgcttccatcaatgtattgtctgcatcatttccaatcccccagatatgtttttatatacacacacattcattttgtttttagaatatacctttattattccccacaaaccctaccacccttccccaattggagtaaactaataaacaatctaccttcagtttatacatacaATACACATTTCACAGAAATTATATTTGGTTTGTTTTTAGGCCTGGCCTTTATTtgtgatgtccatccagtttggtTTCTATTTGTAACTGCTATTTCACAaagtatatacattttacagaccccgtatgttttacattggttatcttgttattagtcccacccttcagctccattcaacccctcccatcttgctcttaacaccatccattttgcATTTCTATtcgccatatatttttcaactgtgctgtgatgcttcacgaaataactgaacctttctattctcatagctttaaaataaaatgtttggcTAAAAtgattattgatcgattgactgacttttcaaatcacccagtaatgctatctgcagcgttagttctaggtaaatgttgcaattcttcagccattcctggacctgtaaccaaaaacgagctacagcTGGACAGTACCAAACTAAATAATCTAATACCTGCCTcatcacagcaaaatctgcataGCTGGGAAGATATCTCAATATCTctcattctattggttgcaagaatatTGTAGAATAATGTACATTTTTGAAAGTTTGTAAAGTTTTGAATCTCTCCAGGTTGTTGCATTAGTTACTTCCTTAACCCCGCTCATCCTTGGTGGGACATAAAACGGCAAACATCTTCTACCACTGGACCCGTCTTCCAGCTCAGCCACCACTGTCCGTCGCCATGACATTTTTAGTCTGCCTCACATGCACTTTCTTGCTGGTGTTCACCTGAGGGCAACTTTGTGTTTTTTATCTCTGCATTAACACTATGGAAAATCTCCATTGAGCATTATTTCAGTCCAGGACGAGGCTTAacctgtgtctgggaaactggccctcaCTGTTTTGACAAGGAAGGGACAAAGAAGTCAGACAAGATTTTTAGGAAGGTTTGTATTATTGACAATGTAGAATACAAATAAAAAGTATCTATAAATAAAATGGGTACAACTCACATTAAAATGTCACAAAATAATATAAATGTACATAAAACATATATTGAGGCTCTGGGGTGAACCTAGTTGTTGCTTCTTTCAATTTGAACCAAAACCAATTTAAAAAGATATATCCCCAATAGTGAATAACATATAGAAAATCAAAATACTgtaaatcaaaatagattttgttTGCCTATCAAAATGTTTCTCAGATGGAAAAACAGGTTGACACTGAACAAGATTCTGTATAATTGCCATCCTTTTGCCAACATTCTTCATTAATAAATCAATTCATCaaaa
>XM_021572648.2
CAGCCAACACGTTATGTGGTTGATGGGTTGGTCATTTTTTCCCACTGCCTTGGTTAGCTTTCTATCCCGTTATTCGGAGATAATAGTGGCCTTGCCGTTTAAATCTACACTATTTAGCTATTTAGGATATGAGATTATTAGCTATTAGTAGAATTAACTGGCTACATATATCTACCGGTATTTTACAATTTAAAGTTATAACGTACTGTTGCAATAATGTTGCCATTCCTCCAAGGATGTGTTGCTGATTCCTCCAACATTTCTCTTTCGCGGATACATTGTATCACCTTATTCAAACCAGTTGTCCTACATCTATTATAACATACCAATATCACATAGCTACAGTAAATCTAAGTATGTCATGCAATTGATGGCCAAAAGttatcttaatcttttatttcttATACTGTCGTCATATCATTATGAATTGAATACATTTGCATGACATTATGTAGAAGCCGAAATAATGCATTAGGCCTAATATTGTGTGAAAACTATTTCCTATGTCACCACATGATTATAAGTACATTTTGCCATGTGCCTAGATGTGCTAGAAATTGCAAGTGAAGCATTCAgcaatttttttttgcaaacatgcCTCTGTTTGAGAAAAGATTCAAAATAAGTATTgcttttgtttgtgtttgttggtCTATTAAGTTTTCATTGTGCATGTATCTGGTTTCACACACAATGATGTGATTGGGAGAAACATCCATGTACAGCCTAATCTGGGTTTGAAGCAGAGAACTGCCATACCAGACGTGATTACCATCCTGTCGAGGTCGCACGCCGACCGGAACGTCTACCCGTCTGCAGGCGTGCTGTTTGTCCATGTCCTGGAGAGAGAACACTTCAAAGGAGAGTTTcccccctatcccaaacctgGGGATTCCAGCAACGACCCCATCACCTTCAACACCAACCTGATGGGCTACCCAGACCGGCCAGGCTGGCTGCGGTACATCCAGAGAACCTCACACAGCGATGGGGTGCTCTACGGATCCCCCACTGCAGAACACGTGGGCAAGGCCACCATCATAGAGATTACTGCCTATAACAGACGCACTTTCGAAACGGCCCGGCACAACTTGGTCATAAACATCATGTCCACGGAAgactACCCACTGCCATACCAGGCAGAGTTCTTCATAAAGAACATGAATGTGGAGGAGATGTTGGCCAGCGAGGTTCTGGGAGACTTCCTTGGCGCAGTGAAGAACGTGTGGCAGCCCGAACGCCTCAACGCCATCAACATCACCTCAGCGCTGGACAGGGGCGGACGTGTTCCCCTGCCCATAAACAACCTCAAAGAGGGTGTGTATGTGATGGTGGGGGCAGACGTGCAGTTCTCTTCCTGCCTGAGGGAGGTGGAGAACCCCCACAACCAGCTGCGCTGCAGCCAGGAGATGGAGCCTGTCATCAGCTGTGACAAGAAGTTCAGGGCCCAGTTCGACATTGACTGGTGCAAGATCAACCTGgtGGACATCACCAAGGTGGTCACGATCCACAGTAACCGTCCGGACCCAGGTACAGGGGTTCTGCCTGACATCGGGGAGTACAACCCCCCATCAGAGTCTCTGAAGAGCAGGGACTTCTTTGCCGACTTCCTCATCACGTTGGCAGTGCCCTCGGCCGTGGCCATGGTCCTCTTCACCATCCTGGGTTACTCCATGTGCTGCCGGCGAGAAGGGGTGGATAAAAGAAACATGCAAACACCAGAtaTCCAGTtagtacatcacagctccatccAAAAGTCGACCAAGGAGCTGCGGAGCATGTCTAAGAACAGGGAGATCTCCTGGCCCCTCTCCACCCTGCCTGTCTTCAGCCAAAGTGGGGAGGTGGTGCCCCCCATACACCCAGACAACTACGAGACAACCAGCATGCCGCTGATGCAGACACAGACAAACCTGCAGAACCAGATTCAGATACCACAGCAACAGCCATCAGGAGATAGAGATAATTATTGTATGTCAACATTTCGGAGACTGGAGGTAAATGGTATTCCTGAGGAGAGGAAAGTGGCTGAAGCACTGAACTTGTGACAAGAGAGAAGCCCAAGAGACAGTGGTGGAGCTGCTATCTGTCTGTCCGTGTCCCTTTAAGCCAAGTGTTTTTCTATGTCTACATCctatatagagtaccacagtatgagtcataatagaCATCAAACCTAGCGGTCAAATAGGGAAACGGTTCCAATCGTTtatccaccattcatttttcccataggggattttagaaacacttataataagggctgtgtttcatgtaggcttaccctggtgtgacatgttgataaccgtgtaaatctctctaggacattTGTAGTTTTGCATTATGTCTACTTTGACCCaaattagcattttcgaatctgagagtaGAGCCAAATaaattgataaaagtcaccttatCCTAGAGAGATTTTattggttatcaaaatgtcacaccaGGGAAAGCCTACATGAAACAGTCCTTATTTAAAGTGTTTTGAAAATCccatatgggaaaaatgaatggtagcAAAAGGATTGGAAGCATCACCCCGTTTGACcgttaggttttatgggtattatgacacctccattgTGGGGCTCTATACCCAATTTCCTGCAcaacttctgaccagggcccagagaCACTACGTCTGTCCCAATCTGCATGCCCCAGCAGTACGTTCATACTCAACGCTAGTGTCCGTCAGTGTGCCCTTATGTATGTGAGCGAGTGGTGCAGAGTACAGTAAACTCATGATAAGTGCACTTAGTATGAGAGCAAGCTGATTAAGTGCAGTCCCAATTCAATTACACTCATAACTGTGTGCTCTTATTTAATGCACACGGTCACCACAATCCTAAACAGCTGCATTTATCAGTagtcgactgtgtgtgtgtataccagcCTGATCATGAATAACAAATGCTACATTCATAGGATATTTAGAAATATTTTGTGCATATGTTCTAGAAATTATATGATGCCATTAACAATATCATGTTAGTATTTTACTTTCCATGCACAATGCTCATATTTAGAGGGAAACGGAGATGGACAGAGACGCTCGTCAAGtccaatcaaataaaaatgtaaatgctAATTTTCTGTCATATAACAGTAAAAATAAGTTTGGTTTAAGTTTGCTGTCAATTGTGTTCAACGGCTGCAACTGTAGCACCAGGCCCCCAGCACACGCATTATAGTAATCTGTTAAGCCCATCTGTGGAAGGTCAGAAGGGCCCACTCGCTCTCCCCGGGTCATTTGTTTTCAGGGGTTGGAtgagctttaatattgcagataggttgttgcttccatcaatgtattgtctgcatcatttccaatcccccagatatgtttttatatacacacacattcattttgtttttagaatatacctttattattccccacaaaccctaccacccttccccaattggagtaaactaataaacaatctaccttcagtttatacatacaATACACATTTCACAGAAATTATATTTGGTTTGTTTTTAGGCCTGGCCTTTATTtgtgatgtccatccagtttggtTTCTATTTGTAACTGCTATTTCACAaagtatatacattttacagaccccgtatgttttacattggttatcttgttattagtcccacccttcagctccattcaacccctcccatcttgctcttaacaccatccattttgcATTTCTATtcgccatatatttttcaactgtgctgtgatgcttcacgaaataactgaacctttctattctcatagctttaaaataaaatgtttggcTAAAAtgattattgatcgattgactgacttttcaaatcacccagtaatgctatctgcagcgttagttctaggtaaatgttgcaattcttcagccattcctggacctgtaaccaaaaacgagctacagcTGGACAGTACCAAACTAAATAATCTAATACCTGCCTcatcacagcaaaatctgcataGCTGGGAAGATATCTCAATATCTctcattctattggttgcaagaatatTGTAGAATAATGTACATTTTTGAAAGTTTGTAAAGTTTTGAATCTCTCCAGGTTGTTGCATTAGTTACTTCCTTAACCCCGCTCATCCTTGGTGGGACATAAAACGGCAAACATCTTCTACCACTGGACCCGTCTTCCAGCTCAGCCACCACTGTCCGTCGCCATGACATTTTTAGTCTGCCTCACATGCACTTTCTTGCTGGTGTTCACCTGAGGGCAACTTTGTGTTTTTTATCTCTGCATTAACACTATGGAAAATCTCCATTGAGCATTATTTCAGTCCAGGACGAGGCTTAacctgtgtctgggaaactggccctcaCTGTTTTGACAAGGAAGGGACAAAGAAGTCAGACAAGATTTTTAGGAAGGTTTGTATTATTGACAATGTAGAATACAAATAAAAAGTATCTATAAATAAAATGGGTACAACTCACATTAAAATGTCACAAAATAATATAAATGTACATAAAACATATATTGAGGCTCTGGGGTGAACCTAGTTGTTGCTTCTTTCAATTTGAACCAAAACCAATTTAAAAAGATATATCCCCAATAGTGAATAACATATAGAAAATCAAAATACTgtaaatcaaaatagattttgttTGCCTATCAAAATGTTTCTCAGATGGAAAAACAGGTTGACACTGAACAAGATTCTGTATAATTGCCATCCTTTTGCCAACATTCTTCATTAATAAATCAATTCATCaaaa
>TU1793724
tggtagcAAAAGGATTGGAAGCATCACCCCGTTTGACcgttaggttttatgggtattatgacacctccattgTGGGGCTCTATACCCAATTTCCTGCAcaacttctgaccagggcccagagaCACTACGTCTGTCCCAATCTGCATGCCCCAGCAGTACGTTCATACTCAACGCTAGTGTCCGTCAGTGTGCCCTTATGTATGTGAGCGAGTGGTGCAGAGTACAGTAAACTCATGATAAGTGCACTTAGTATGAGAGCAAGCTGATTAAGTGCAGTCCCAATTCAATTACACTCATAACTGTGTGCTCTTATTTAATGCACACGGTCACCACAATCCTAAACAGCTGCATTTATCAGTagtcgactgtgtgtgtgtataccagcCTGATCATGAATAACAAATGCTACATTCATAGGATATTTAGAAATATTTTGTGCATATGTTCTAGAAATTATATGATGCCATTAACAATATCATGTTAGTATTTTACTTTCCATGCACAATGCTCATATTTAGAGGGAAACGGAGATGGACAGAGACGCTCGTCAAGtccaatcaaataaaaatgtaaatgctAATTTTCTGTCATATAACAGTAAAAATAAGTTTGGTTTAAGTTTGCTGTCAATTGTGTTCAACGGCTGCAACTGTAGCACCAGGCCCCCAGCACACGCATTATAGTAATCTGTTAAGCCCATCTGTGGAAGGTCAGAAGGGCCCACTCGCTCTCCCCGGGTCATTTGTTTTCAGGGGTTGGAtgagctttaatattgcagataggttgttgcttccatcaatgtattgtctgcatcatttccaatcccccagatatgtttttatatacacacacattcattttgtttttagaatatacctttattattccccacaaaccctaccacccttccccaattggagtaaactaataaacaatctaccttcagtttatacatacaATACACATTTCACAGAAATTATATTTGGTTTGTTTTTAGGCCTGGCCTTTATTtgtgatgtccatccagtttggtTTCTATTTGTAACTGCTATTTCACAaagtatatacattttacagaccccgtatgttttacattggttatcttgttattagtcccacccttcagctccattcaacccctcccatcttgctcttaacaccatccattttgcATTTCTATtcgccatatatttttcaactgtgc

Function

symbol description
sgce Predicted to enable calcium ion binding activity. Predicted to be located in several cellular components, including Golgi apparatus; dendrite; and sarcolemma. Predicted to be integral component of membrane. Predicted to be part of sarcoglycan complex. Is expressed in central nervous system; retina; retinal ganglion cell layer; and retinal inner nuclear layer. Human ortholog(s) of this gene implicated in myoclonic dystonia. Orthologous to human SGCE (sarcoglycan epsilon).

NR:

description
PREDICTED: epsilon-sarcoglycan isoform X2

GO:

id name namespace
GO:0016012 sarcoglycan complex cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572642.2 False 4378 mRNA 0.43 12 59439776 59472172
XM_021572643.2 False 4351 mRNA 0.43 11 59439776 59472172
XM_021572645.2 False 4333 mRNA 0.43 11 59439777 59472172
XM_021572646.2 False 4306 mRNA 0.43 10 59439777 59472172
XM_021572648.2 False 4739 mRNA 0.42 12 59440270 59472172
TU1793724 True 1204 lncRNA 0.40 1 59469954 59471157

Neighbor

gene id symbol gene type direction distance location
pdk4 LOC106588934 coding upstream 141170 59283660 ~ 59298606 (+)
LOC110496872 slc25a13 coding upstream 283481 59058526 ~ 59156295 (+)
sem1 shfm1 coding upstream 404388 59024919 ~ 59035388 (+)
dlx5a dlx5 coding upstream 480105 58957121 ~ 58959671 (+)
trnaa-ugc-140 NA coding upstream 494442 58945261 ~ 58945334 (+)
LOC110496636 bet1 coding downstream 172487 59644659 ~ 59647881 (+)
LOC100305210 tfpi2 coding downstream 231520 59703692 ~ 59709295 (+)
LOC110496635 NA coding downstream 275478 59747650 ~ 59753905 (+)
LOC110496640 LOC106588943 coding downstream 297811 59769983 ~ 59851172 (+)
cdk6 cdk6 coding downstream 784535 60256707 ~ 60351422 (+)
G1567764 NA non-coding upstream 14789 59424235 ~ 59424987 (+)
G1567707 NA non-coding upstream 117364 59321341 ~ 59322412 (+)
G1567653 NA non-coding upstream 250014 59189453 ~ 59189762 (+)
G1567555 NA non-coding upstream 451126 58988048 ~ 58988650 (+)
G1567543 NA non-coding upstream 463361 58961242 ~ 58976415 (+)
G1567804 col1a2 non-coding downstream 29001 59501173 ~ 59585317 (+)
G1567808 NA non-coding downstream 44294 59516466 ~ 59520161 (+)
G1567805 NA non-coding downstream 48782 59520954 ~ 59543221 (+)
G1568244 NA non-coding downstream 130111 59602283 ~ 59648312 (+)
G1568302 NA non-coding downstream 224593 59696765 ~ 59738580 (+)
G1567716 asb4 other upstream 127053 59309984 ~ 59312723 (+)
LOC110496618 LOC106588914 other upstream 566086 58864013 ~ 58873692 (+)
G1566445 LOC106588893 other upstream 1062770 58364256 ~ 58377006 (+)
G1568568 NA other downstream 431992 59904164 ~ 59905204 (+)

Expression

sgce(sgce) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 50.
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sgce(sgce) Expression in each Bioproject

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sgce(sgce) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1500.
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Co-expression Network