LOC100305210 (tfpi2)


Basic Information

Item Value
gene id LOC100305210
gene name tfpi2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 59703692 ~ 59709295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001165114.1
AGAAGAGTTAAGGAGAATTGAACTTGGGAAAAATCTACAACAATGGAGCTCAGTTCATTGATTTTTCTGATCCTTTCATGCTCTCTTTGTTACGTTTTTGCATTGTCACCGAAACAAGAGGTGTGTCTACTTCAAGTAGATGAGGGACCTTGCAGAGGAGATATCCAACGTTACTACTACAATACTATCACTCAACAATGCGAAGAGTTTGTCTATGGAGGGTGCCAAGGGAATGCAAACAACTTCATGAGTTTTCTGGCGTGTCAGAAAGCATGTTTTAGAATACCAAAGATCCCCCAGATCTGCAGGTTCCAGAAAGAGGTGGGTCCCTGTCGGGCCAATTTCTTGAGCTACTTCTTCAACATGACCACCATGCAGTGTGAGCAGTTCGTCTACGGAGGCTGCCAGGGCAACGAGAACCGCTTTCAGGACCAGTTGTCTTGCatggagtactgcagaccacacaaaaCTACTCCTGTGCTCTGCCTGGATCCCCTGGATAAAGGAGGGTGTGCTGCATCTATACCGCGCTACTACTACAACTCAGCCTCCAGGATGTGTGAGCAGTTCATCTATTCAGGTTGTGGAGGAAGCAGCAACAACTTTATATCCAGACAAAGCTGCATGGACGTCTGTGCTAAAGCTGGGAAACCATGGATAAGCAGAAAAACAGGCAGAAGAGCAGGCATGATGAGAACAACTTCCAAAAACCGTATTAGAATAAAGCCTAATAACAATATTAAATGGTCAACAATTTGATTCAGTGATTTTATTCAAAGGGGCACATGAATTGACTATAATTGAACTAACATTGACATgttgaattgtattttttttactgcaCCATAATTGACTTGCTACTTGCACTGCCTTGTCTGTAATGGTTCATGGTGATGCATAGTTGAAAATAGcaaaccaatcaatcaaatgtgaATCGACCTACACCAGCAGTATTTTTGCTGAGTACGTTTCTCAAGACAGTTTGTATTGTAGTATACATTTACCATGGCAACTATCAtacaatataaaaatatatttttgtagaatttttttaatgtattttagattttttaaaatacTTTAACAGTTTACTGTTACTTTTCCACCATTTCTGATGAAGTTATACTGAGGCACTGTTTAAATTGTTAAGCAATATTAACAAAATAATTTatgtattgttttgtgttttcaaCATAGTACATTTTAACAAAAACCTTTGCTTAACTTTATATTAAGTTTTCACACCATGACATAATGGATATAATAAAATAACTCAAGACATTTTTGTCTGTACGCTCCGTTGCTTTTCTCCCATTTGTCCTGAAATTCCACTTTGCCTCTAAATATAATCCTGTTACTAAACAGGAATAAGAACTG

Function

symbol description
tfpi2 Predicted to enable serine-type endopeptidase inhibitor activity. Acts upstream of or within several processes, including heart development; regulation of hemopoiesis; and sarcomere organization. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in brain; eye; heart; liver; and ovary. Human ortholog(s) of this gene implicated in acute myeloid leukemia and retinal degeneration. Orthologous to human TFPI2 (tissue factor pathway inhibitor 2).

NR:

description
tissue factor pathway inhibitor 2 precursor

GO:

id name namespace
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
K23087 TFPI2; tissue factor pathway inhibitor 2

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001165114.1 True 1377 mRNA 0.38 5 59703692 59709295

Neighbor

gene id symbol gene type direction distance location
LOC110496636 bet1 coding upstream 55811 59644659 ~ 59647881 (+)
sgce sgce coding upstream 231520 59439776 ~ 59472172 (+)
pdk4 LOC106588934 coding upstream 405086 59283660 ~ 59298606 (+)
LOC110496872 slc25a13 coding upstream 547397 59058526 ~ 59156295 (+)
sem1 shfm1 coding upstream 668304 59024919 ~ 59035388 (+)
LOC110496635 NA coding downstream 38355 59747650 ~ 59753905 (+)
LOC110496640 LOC106588943 coding downstream 60688 59769983 ~ 59851172 (+)
cdk6 cdk6 coding downstream 547412 60256707 ~ 60351422 (+)
LOC110496955 LOC106588949 coding downstream 646655 60355950 ~ 60361942 (+)
LOC110496647 LOC106588950 coding downstream 658810 60368105 ~ 60370534 (+)
G1568244 NA non-coding upstream 55380 59602283 ~ 59648312 (+)
G1567805 NA non-coding upstream 160471 59520954 ~ 59543221 (+)
G1567808 NA non-coding upstream 183531 59516466 ~ 59520161 (+)
G1567804 col1a2 non-coding upstream 198827 59501173 ~ 59585317 (+)
G1568310 NA non-coding downstream 1549 59710844 ~ 59757414 (+)
G1568373 NA non-coding downstream 112081 59821376 ~ 59822173 (+)
G1568384 NA non-coding downstream 135851 59845146 ~ 59845375 (+)
G1568385 NA non-coding downstream 137492 59846787 ~ 59847176 (+)
G1567716 asb4 other upstream 390969 59309984 ~ 59312723 (+)
dlx5a dlx5 other upstream 744841 58957121 ~ 58959671 (+)
G1568568 NA other downstream 194869 59904164 ~ 59905204 (+)
G1569099 NA other downstream 900653 60609948 ~ 60616294 (+)
recql4 recql4 other downstream 2258653 61967906 ~ 61991797 (+)

Expression


Co-expression Network