LOC110496637 (gng11)


Basic Information

Item Value
gene id LOC110496637
gene name gng11
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 59712624 ~ 59738593 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953417.1
TAGTTGCGCATGTGCAGCTCATTGACGCACACACAACATAAACTGTTACTTACACAGAAATGGCTCAGCGACTGAATTTGGTAGTAAGCCGTCATTTCTCCAAATTAACCTCGCTAAGCAGTACAAGGAAGCTGTCTGAAAATGTCTCATCTAAACCCAAAACGGCCAGTGGTTCAGAGATAACGGCTGATCATTTACTCTACACACCAGAGCATTTTGCGTTGAAGGAATCTCTTAAAAAGATCATCGACCAGGATATCAACCCCTATGTGGACCAATGGGAGGCAGAGGGGATATTTCCTGCCCACAAAGTCTTCAAGCTCTTGGGAAATGCTGGCTTTCTGGGTGTCAACAAGCCAGTTGgacctgagccctaggaccatgcctcagga
>XR_005037526.1
ATAACCCGgattgagggagaggagagagatttcTCTGGCAGTATTCAGGGGTGGAAGACAGTTACCAGTAAAACACAACAATGCCGGTGATAAATATGGACGAGTTGACAGACGTGGATAAGGCTAAAATGGAAAGAGACCAAAAGAAGATTGAAGTCAAGCTTGAGAGATGGATGACGTCTAAGTGCTGTACTGAGTTTATGGAGGCGGTTCAGGCCGGTGTAGAAGAGGACACTCTGGTCAAAGGCATCGCAGAAGACAAGAACCCATTCAAGGAGTTGAAAGGTGGATGTGTCGTCTGCTGAAGAGGACAGGAGTCAGAACAGACAGTGGAGCTTTTCTTTCACTGATTAGACCCTCTCTAGTGCCCAAGGACATGCCCCCTTCCTAGGAAACATAGCTGGATCACCAATAGCTAACCGAGAGGAGatggtaaaaaaacaaacagatgtAAATAAATCTAAATCTCATGAAACCATGTAAATTAATCCTTCTAGATTGTGATCCCTCCTTGGAGTGATGCAGGAAATAAGGGTTGTTTTTGGAATGATTGTCAGAGGTTTGTTGGATGGTTTATATTGTCAGTAAAGAGCTTGTCTCCCATGAGACTGTCTATAGTCTGAGTGTGCACCATCTGTTTCATTATTGGACAAAACCACAGTAATTAAATGAGCTTGTTTACAACTACAAGTCACCCGAATGTTGTGTGAAAGACAGAGTACTTTTACAGGCTTATAGACACATGCTTATAGACACAAGATGGTATTGACAAATCTGCCATCAATGGGGAAAAAAGTAGTTATGAAAGTAAGGAACATGTATGTTATGGGTAGCTCACCTGAACATCATGAAATCCCACTTTCTAGCCTACAGCTTTCTACTTTGTCTGACATGACCTACTACTGCATTTATGCCGCGTTGagaacaactgggaactcgaaagAAATACGAAATCACATCATGACGTcaatgatcttcaggtcggaaagacGGATCTCTAGAAAAAGGCCCGCACAGAAATCGGAGATTTCGGAGTTCCCaattgttttgaacgtggcaatAGCCTGTGACACTACTAGTTGCGCATGTGCAGCTCATTGACGCACACACAACATAAACTGTTACTTACACAGAAATGGCTCAGCGACTGAATTTGGTAGTAAGCCGTCATTTCTCCAAATTAACCTCGCTAAGCAGTACAAGGAAGCTGTCTGAAAATGTCTCATCTAAACCCAAAACGGCCAGTGGTTCAGAGATAACGGCTGATCATTTACTCTACACACCAGAGCATTTTGCGTTGAAGGAATCTCTTAAAAAGATCATCGACCAGGATATCAACCCCTATGTGGACCAATGGGAGGCAGAGGGGATATTTCCTGCCCACAAAGTCTTCAAGCTCTTGGGAAATGCTGGCTTTCTGGGTGTCAACAAGCCAGTTGagcatggaggc
>XM_036953416.1
TAGTTGCGCATGTGCAGCTCATTGACGCACACACAACATAAACTGTTACTTACACAGAAATGGCTCAGCGACTGAATTTGGTAGTAAGCCGTCATTTCTCCAAATTAACCTCGCTAAGCAGTACAAGGAAGCTGTCTGAAAATGTCTCATCTAAACCCAAAACGGCCAGTGGTTCAGAGATAACGGCTGATCATTTACTCTACACACCAGAGCATTTTGCGTTGAAGGAATCTCTTAAAAAGATCATCGACCAGGATATCAACCCCTATGTGGACCAATGGGAGGCAGAGGGGATATTTCCTGCCCACAAAGTCTTCAAGCTCTTGGGAAATGCTGGCTTTCTGGGTGTCAACAAGCCAGTTGGACAGCTCTCcagccaggactaattggggctggtgagtaatcaagggctgattgctcaccagctgtacgAGTCCCATAAAGCTGAAGAAAGGGGagcacacaggagagagactgggggaagaaAGGACTCCTGGGGACGGTTCCAGCCGTAACAGGAGAGAGTTCAGTTTTTGCTCTccacaggatacagcaagacgcaaagcccagaagacggtatcccggAGAGGGTCTCTTGGGGGAGACCTATTCTTTTCTTTTGAACTATTAGGTTAATAAACACCTTTGAAACTGA
>XM_036953415.1
CTAGTTGCGCATGTGCAGCTCATTGACGCACACACAACATAAACTGTTACTTACACAGAAATGGCTCAGCGACTGAATTTGGTAGTAAGCCGTCATTTCTCCAAATTAACCTCGCTAAGCAGTACAAGGAAGCTGTCTGAAAATGTCTCATCTAAACCCAAAACGGCCAGTGGTTCAGAGATAACGGCTGATCATTTACTCTACACACCAGAGCATTTTGCGTTGAAGGAATCTCTTAAAAAGATCATCGACCAGGATATCAACCCCTATGTGGACCAATGGGAGGCAGAGGGGATATTTCCTGCCCACAAAGTCTTCAAGCTCTTGGGAAATGCTGGCTTTCTGGGTGTCAACAAGCCAGTTGCAGGACAGCTCTCcagccaggactaattggggctggtgagtaatcaagggctgattgctcaccagctgtacgAGTCCCATAAAGCTGAAGAAAGGGGagcacacaggagagagactgggggaagaaAGGACTCCTGGGGACGGTTCCAGCCGTAACAGGAGAGAGTTCAGTTTTTGCTCTccacaggatacagcaagacgcaaagcccagaagacggtatcccggAGAGGGTCTCTTGGGGGAGACCTATTCTTTTCTTTTGAACTATTAGGTTAATAAACACCTTTGAAACTGA
>XM_036953414.1
ACTAGTTGCGCATGTGCAGCTCATTGACGCACACACAACATAAACTGTTACTTACACAGAAATGGCTCAGCGACTGAATTTGGTAGTAAGCCGTCATTTCTCCAAATTAACCTCGCTAAGCAGTACAAGGAAGCTGTCTGAAAATGTCTCATCTAAACCCAAAACGGCCAGTGGTTCAGAGATAACGGCTGATCATTTACTCTACACACCAGAGCATTTTGCGTTGAAGGAATCTCTTAAAAAGATCATCGACCAGGATATCAACCCCTATGTGGACCAATGGGAGGCAGAGGGGATATTTCCTGCCCACAAAGTCTTCAAGCTCTTGGGAAATGCTGGCTTTCTGGGTGTCAACAAGCCAGTTGgctgtctcatcgttgtcggtgatcaggcctaccagttatgtcttcagcaaacttaatgatggtg
>XM_021572653.2
CCCGgattgagggagaggagagagatttcTCTGGCAGTATTCAGGGGTGGAAGACAGTTACCAGTAAAACACAACAATGCCGGTGATAAATATGGACGAGTTGACAGACGTGGATAAGGCTAAAATGGAAAGAGACCAAAAGAAGATTGAAGTCAAGCTTGAGAGATGGATGACGTCTAAGTGCTGTACTGAGTTTATGGAGGCGGTTCAGGCCGGTGTAGAAGAGGACACTCTGGTCAAAGGCATCGCAGAAGACAAGAACCCATTCAAGGAGTTGAAAGGTGGATGTGTCGTCTGCTGAAGAGGACAGGAGTCAGAACAGACAGTGGAGCTTTTCTTTCACTGATTAGACCCTCTCTAGTGCCCAAGGACATGCCCCCTTCCTAGGAAACATAGCTGGATCACCAATAGCTAACCGAGAGGAGatggtaaaaaaacaaacagatgtAAATAAATCTAAATCTCATGAAACCATGTAAATTAATCCTTCTAGATTGTGATCCCTCCTTGGAGTGATGCAGGAAATAAGGGTTGTTTTTGGAATGATTGTCAGAGGTTTGTTGGATGGTTTATATTGTCAGTAAAGAGCTTGTCTCCCATGAGACTGTCTATAG
>TU1794475
CACAACATAAACTGTTACTTACACAGAAATGGCTCAGCGACTGAATTTGGTAGTAAGCCGTCATTTCTCCAAATTAACCTCGCTAAGCAGTACAAGGAAGCTGTCTGAAAATGTCTCATCTAAACCCAAAACGGCCAGTGGTTCAGAGATAACGGCTGATCATTTACTCTACACACCAGAGCATTTTGCGTTGAAGGAATCTCTTAAAAAGATCATCGACCAGGATATCAACCCCTATGTGGACCAATGGGAGGCAGAGGGGATATTTCCTGCCCACAAAGTCTTCAAGCTCTTGGGAAATGCTGGCTTTCTGGGTGTCAACAAGCCAGTTGGTATGAACTTCTTCTGTGTCTCTTCCTCTGTGAAATTGAATTGTCTC

Function

symbol description
gng11 Predicted to enable G-protein beta-subunit binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be part of heterotrimeric G-protein complex.

NR:

description
probable acyl-CoA dehydrogenase 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953417.1 False 392 mRNA 0.46 3 59712624 59736811
XR_005037526.1 False 1450 mRNA 0.43 5 59719440 59738593
XM_036953416.1 False 655 mRNA 0.47 3 59721805 59736811
XM_036953415.1 False 659 mRNA 0.48 3 59721805 59736812
XM_036953414.1 False 429 mRNA 0.45 3 59723043 59736813
XM_021572653.2 False 614 mRNA 0.44 3 59737270 59738589
TU1794475 True 379 TUCP 0.44 2 59729179 59736780

Neighbor

gene id symbol gene type direction distance location
LOC110496638 gng11 coding downstream 14460 59696846 ~ 59698164 (-)
zgc:85777 ivd coding downstream 16238 59647948 ~ 59696386 (-)
LOC110496639 NA coding downstream 33600 59673674 ~ 59679024 (-)
col1a2 col1a2 coding downstream 187610 59501168 ~ 59525014 (-)
casd1 casd1 coding downstream 225337 59473168 ~ 59487287 (-)
LOC110496642 vps50 coding upstream 168313 59906906 ~ 59932090 (-)
LOC110496641 vps50 coding upstream 280041 60018634 ~ 60200664 (-)
LOC110496644 LOC106588945 coding upstream 463355 60201948 ~ 60254724 (-)
LOC110496648 NA coding upstream 633925 60372518 ~ 60374871 (-)
LOC110496650 elmo1 coding upstream 686456 60425049 ~ 60603918 (-)
G1568136 NA non-coding downstream 311701 59400053 ~ 59400923 (-)
G1568122 NA non-coding downstream 338144 59370597 ~ 59374480 (-)
G1568121 NA non-coding downstream 341517 59369575 ~ 59371107 (-)
G1568035 NA non-coding downstream 439404 59194899 ~ 59273220 (-)
G1568027 NA non-coding downstream 531876 59180098 ~ 59180748 (-)
G1568438 NA non-coding upstream 19047 59757640 ~ 59760282 (-)
G1568502 NA non-coding upstream 111036 59849629 ~ 59851133 (-)
G1568505 NA non-coding upstream 114417 59853010 ~ 59853235 (-)
G1568517 NA non-coding upstream 125345 59863938 ~ 59864236 (-)
G1568524 NA non-coding upstream 131201 59869794 ~ 59870109 (-)
G1568017 NA other downstream 555580 59155028 ~ 59157044 (-)
G1567931 NA other downstream 637976 59004845 ~ 59074648 (-)
G1567871 LOC106588914 other downstream 838933 58870937 ~ 58873691 (-)
G1567875 NA other downstream 842617 58869363 ~ 58870007 (-)
G1567080 NA other downstream 1301495 58410499 ~ 58411129 (-)
G1569198 NA other upstream 503338 60241931 ~ 60251369 (-)
G1569258 NA other upstream 610183 60348776 ~ 60350759 (-)
G1569277 NA other upstream 641260 60379853 ~ 60389092 (-)
LOC110496651 NA other upstream 871894 60610487 ~ 60642154 (-)
G1569439 NA other upstream 954785 60693378 ~ 60694099 (-)

Expression


Co-expression Network