LOC118941000


Basic Information

Item Value
gene id LOC118941000
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 62018416 ~ 62035927 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118941000
aaagagaccgagagagagagagaccgagagagaaagagaccgagagagaaagagacagagagacagagaaagacagagagagagagagaccgagagaccgagagagagtgagacagagagagagagagaccgagagagagagagagagagagagaccgagagacagagagacagagagagagagagaccaagagagagagacagagagagagagagacagagagagacagagggagactgagagagagtgagaccgagagagagagagagacagagatggagagagaccgagagagagagagaccgagagagaccgagagagagagagacagagagagagagacaccgagagaaagagagacagagagagagagagaccgagagacagagagaccgagagagagagagagagaccgatagagagagagagagagagaccgagagagagaccgagagagagagagacagagagagagagacaccgagagaaagagagaccgagacagagagagaccgagacagagagagaccgagacagagagagaccgagagagagtgagacagagagagagagagagagaccgagagagggagaccgagagagagaccgagagagagaccgagagagagagagacagagagagagagagagacagagagagagagagaccgagagagaatgagaccgagagagaaagagaccgagagagagagaccgagacagagagagagacagagagagagagagagagacagagagagaccgagagagaaagagaccgagagagagagaccgagagagaaagagacagagagacagagaaagacagagagagagagagagagagaccgagagagaaagagaccgagagacagagaaagacagagagagagagaccgagagagagagagggaccaagagagagagagagagaccgagagacagagagagagagagaccgagagagagagacccagagagagaacgagagagagagagagaccgagagagagagagagagagagacatagagacagagagacagagagagagagagaccgagagagagagagacagagagagacagagagagagagacagagagagacagagacagagagaccgagagagagagacagagagagagagagagagacagatagagacagagggagacagagggagacagagagagatagagagacagagagagagagagacagagagagagagagacagagagagagagagagagagaccgagTCCACCACGGGCCCTCTCCAGTCCACCACGACTCTCCCCAGTCCACCACGGGCCCTCCCCAGTCCACCACAACTCTTCCCAGTCCACCACGACTCTCCCCAGTCCACCACGACTCTCCCCAGTCCACCACGGCTCTCCCCAGTCCACCACGGTTCTCCCCAGTCCACCACGGGCCCTCCCCAGTCCACCACGACTCTCCCCAGTCCACCAAGACTCTCCCCAGTCCACCACGACTCTCCCCAGTCCACCACGGCCTCCCCAGTCCACCACGACTCTCCCCAGTCCACCACGGCTCTCCCCAGTCCACCACGACTCTCCCCAGTCCACCACGGCTCTCCCCAGTCCACCACGGGCCCTTCCCAGTCCACCACGGGCCCTCCCCAGTCCACCACGACTTTCCCCAGTCCACCACGACTCTCCCCAGTCCACCACGACTCTCCCCAGTCCACCACGGGCCCTCCCCAGTCCACCACGActctccccagtACACAAAGGGTGTCCCAATGTGAGAGAAGCAGGAGCAGCCCCAGCCCACCACGACTCTCCCCAGTCCACCACGACTCTCCCCAGCCCACCACGGGCCCTCCCCAGCCCACCACgggcccccccccccagcccaccACGGGCCCTCCCCAGCCCACCACGGGCCCTCCCCAGCCCACCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118941000 True 1930 mRNA 0.58 3 62018416 62035927

Neighbor

gene id symbol gene type direction distance location
LOC110496668 brp16 coding downstream 49835 61957953 ~ 61968581 (-)
LOC110496666 LOC106588964 coding downstream 150741 61859719 ~ 61867675 (-)
hsf1a hsf1a coding downstream 189839 61797012 ~ 61828577 (-)
LOC110496662 LOC106588967 coding downstream 310014 61690051 ~ 61708402 (-)
LOC110496659 LOC106588970 coding downstream 430569 61545659 ~ 61587847 (-)
LOC118941001 NA coding upstream 7433 62043360 ~ 62098767 (-)
zgc:63863 LOC106588987 coding upstream 348751 62384678 ~ 62407274 (-)
cfap20 cfap20 coding upstream 399888 62435815 ~ 62441111 (-)
LOC110496675 LOC106570403 coding upstream 836061 62871988 ~ 62875096 (-)
LOC110496677 LOC106593246 coding upstream 844565 62880492 ~ 62883071 (-)
G1570900 NA non-coding downstream 596 62017397 ~ 62017820 (-)
G1570892 NA non-coding downstream 11255 62005193 ~ 62007161 (-)
G1570845 LOC100846954 non-coding downstream 84644 61933507 ~ 61933772 (-)
G1570844 NA non-coding downstream 85079 61933133 ~ 61933337 (-)
G1570839 NA non-coding downstream 94641 61923439 ~ 61923775 (-)
G1570912 NA non-coding upstream 23109 62059036 ~ 62059531 (-)
G1570924 NA non-coding upstream 43489 62079416 ~ 62079666 (-)
G1570962 NA non-coding upstream 49461 62085388 ~ 62086276 (-)
G1570963 NA non-coding upstream 52865 62088792 ~ 62089007 (-)
G1570975 NA non-coding upstream 75236 62111163 ~ 62111398 (-)
G1570695 NA other downstream 352506 61665328 ~ 61665910 (-)
elp2 elp2 other downstream 694595 61267281 ~ 61323861 (-)
G1570468 NA other downstream 725265 61291304 ~ 61293151 (-)
G1569439 NA other downstream 1324317 60693378 ~ 60694099 (-)
LOC110496651 NA other downstream 1402124 60610487 ~ 60642154 (-)
G1572487 NA other upstream 1399871 63435798 ~ 63491169 (-)
G1573054 NA other upstream 1977852 64013779 ~ 64014965 (-)
LOC110496680 LOC106589004 other upstream 2147031 64017203 ~ 64244837 (-)
G1573887 NA other upstream 2934364 64970291 ~ 64971167 (-)
G1575088 NA other upstream 3274116 65310043 ~ 65311051 (-)

Expression


Co-expression Network