LOC110496672 (LOC106588986)


Basic Information

Item Value
gene id LOC110496672
gene name LOC106588986
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 62407415 ~ 62435133 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953468.1
TGTTCTCACCGATTTCATCGTCTGTTATTAAGCAAATTCGTATCTATGAATGGACTTTGAGCAAAAACACATGTTTATTAATAATATTTCACATATTTTATAGGACTTTTTTATAATGACTTAATCAAAAAGTATTAAAACGGTGCGCCATTTAGCAGTACAAAAATAACTTCAACTCCCGAAGTCCTCGTCGGTTCACTTCAGGACGACAGAGCGAGCCGCCGTAGAATCTCATACAAACTATCGCTCCTCCTCAATCAACCGAATGTTGACGTTTACAACAGGGACTGCAGCCCGCTCCTCTACAGCTTGCTGACAACACGGGCTGGACTTTCCAGCCGAGACTTGAGGTAGAAACGTCTAGTGCAATTCCAGCAAGATAAGGTTGAATGTATCAAATTTCGGAAATGGTCGACAGAAACGATAGAGTCCCCATGATGACAGGCAGGACAAGGAGATCAACCATCGGCCCCACGCCAGCGGGGGGCAATTCGAAACAAGCCAATGGCAGCAAGCAGAGCAGCGCAGGGGAAAAAACGCCAAGCCATCCGAGCCACAGCAACGGGAAGGTGAAGAAGGAAAAACAGGTGCACGAGCCGGTCAGGACACCACAGGAGAGGAGTAAAATCTGCGAAAGACTCAGCTGCCATGTCCTCCAGGAGTCCCTGCTCAGCTCAGCCAGTGGATACAGTAACTATAGAGGCATCCTCAACTGGTGTGTGGTCATGCTGGTCTTGAGCAATGCACGCCTTTTCCTGGAGAATCTCCTAAAATATGGGATATTGGTGGACCCCGTCCaagttgtttcactgttcttaAAAGACCCATATAGCTGGCCTGCACCATGCCTTGTCATTGTCTCCAACGTGTTCATAATGGCAGCTTTGTACACGGAGCGGAGGCTATCTGTGGGCACCATCTCAGAGACGACTGGAACATTCCTTTACTTGGTCAATCTGACTACCCTCCTCTGTTTCCCATCAGCCACTGTGCTCACGCTGACCTCCATGACCCCAGCTGGTGGAGTCTTTGCCCTGGGTGTGTACACCATCCTCTTCATGAAGCTGTACTCCTATAAAGATGTTAACATGTGGTGCAGAGAGATTAGACATACCAAAGCCCGCACCCTGACCCGCTCCCATTCATGTCCATCTGTGGCCCAGTCAAATGGATCAGCTGTACATTCTCATGTGTCCTACCCTGGGAATCTCACACACAGAGATATATATTACTTTGTGTTTGCCCCAACACTCTGCTATGAACTGAACTTCCCCCGGTCACCACGGATACGCAAGAGCTTCCTGTTGAGGAGACTCTTTGAGATGatGCTGTGTCATCTAAAATCTTTTCCAGCTTTTCTTCATACAGTTACTGATTGGATTGGTACAACAGTGGATAGTGCCGACGATTCAGAATTCCATGAAACCATTCCAGGATATGGACTTTTCCAGAATGATGGAGCGCATGTTGAAACTGGCTCTGAGCTGATGCAGTTTGGAGACAGGGAGTTTTACCGGGACTGGTGGAACTCTGAGACGGTCACTTACTTCTGGTCTAACTGGAACATTCCTGTGCACAAGTGGTGCCTCCGCCACTTTTACAAGCCCATCATGAGGAGGGGAGTGAATAAGTGGGTCGCCCAAACGGCCGTCTTCCTGGTCTCCGCCTTCTTTCACGAGtaCTTGGTGAGCGTTCCTCTGAAAATGTTCAGACTGTGGGCGTTTATGGGCATGATGTCTCAGATCCCACTCGCCTGGTTTGTTGGCCGCTTCCTGAGAGGTAACCATGGCAACGCTGCGGTCTGGATTTCGCTCATCATTGGCCAGCCCGTCGCCGTGCTGATGTACGTCCACGACTACTATGTAATACATTACATGTCACAATCATGAACAGTTGGTCGCAAGCAGAGAAGCAATACATTATACTAAAGGACAAATTGAATGTCAAATGTTTACTTTGAAAGGGAAATATTATATGAAGCTTGACTGAATAGTAAGAATTTTACACTAAGTAAATAGTTTGGCCTCCAGAAACAATTTCTCTAATGCACTTATACATCAGAGAGACTTGGCTCCCGTCCTATCATTGCTGTGAAACACTGCCCTGACAAAACTAGAGAACATTTGTAGGCCTTTTCTCTGTTTCTTACTTAGTCTACAATTATGAAGATCAACGCAGACATTCCTATAGATAACCCTTACTATCGGTGTACTGCTTTTTGTCATGCGTTTGACATGTCTTTTTTGCCTTTGATTAAATGACCTGACTTTTATTTGAAGTTGTGTGAACTCATGTGGCTGCAGTAATAACCAGTCACATGTATTGTGCATAAGTCAAGCCAAATATGTTATTACACTTGTGAAACTGTAATGTGTTTGCACTACAATGCATGCTGTTTgctaataaactttttttttttttttgctataatctttgtaaattatataaATGGAACTGGTGGAGTTGCACATGCAGCTAAGAAAAATATGGAAATGTCTGTTCTACTccattacaaccaactaattgcagcattaccacaaatggaagaggcaagtagaagggggagaaagtaaggaacttgtctgtcggcgcTGCGTTAAAGACGTTGTGGTAAAtagaaagtataccagtttcattttaAGGACCAAGAAAAATGTACAGCTGTTCCATATTGCAAAATAGCTAGGAAGAGATTTaaatgtaccgattccatggcacatgttTATGACCTGATACacaaaacaacgccggattcaaaactgtTTTTCAATTAAAAATGATAATGcaaaccaatagaatgttataggggctacaaccatcccagctctgcataTTGTGCTGCGAAAAGACAATCATtataatttgttttggtactgtccatatgtagcttgtttttggtcacaggttcaggaatggctgaaaaattgcaacatttacctggaggcGTTAACTcagcaaatagcactgctgggtgatttaaagTCAGTCAAATCGATCAATAATAACACTCTtggcaaaaaaaaaattaaaatctgTAAACTGAGAATAGAAAAGGTTCAGAACTTTGAAACGGCACAGTTAAAATATGGCAAGTATATATCAACTGGATGGTGAGATAGCTGGGAGGGGTGGAGTGCTAAAAACAAAACggtgtataagctggaagtagaagcctaaacATGGTTGTCCATTAGTTTCCTCCAATTAGGGAAGGGGTGGTAGTTAGGAGGAAAATATATTTACCTAAAGTCACAATCTGCAATAAAACTGATctacccctccccccaaaaaatgtactgAATAGACGAGTGCTCTTAAGATGATATTCAAAGAGCATCAGAGCTTAAGTACAATGTATTGTCAAATAAGTTGATGTTTTATATGCCAATATTGCCATCCTATTAAAAAGATGCTGGTGATCC
>XM_036953467.1
GTTCTCACCGATTTCATCGTCTGTTATTAAGCAAATTCGTATCTATGAATGGACTTTGAGCAAAAACACATGTTTATTAATAATATTTCACATATTTTATAGGACTTTTTTATAATGACTTAATCAAAAAGTATTAAAACGGTGCGCCATTTAGCAGTACAAAAATAACTTCAACTCCCGAAGTCCTCGTCGGTTCACTTCAGGACGACAGAGCGAGCCGCCGTAGAATCTCATACAAACTATCGCTCCTCCTCAATCAACCGAATGTTGACGTTTACAACAGGGACTGCAGCCCGCTCCTCTACAGCTTGCTGACAACACGGGCTGGACTTTCCAGCCGAGACTTGAGGTAGAAACGTCTAGTGCAATTCCAGCAAGATAAGGTTGAATGTATCAAATTTCGGAAATGGTCGACAGAAACGATAGAGTCCCCATGATGACAGGCAGGACAAGGAGATCAACCATCGGCCCCACGCCAGCGGGGGGCAATTCGAAACAAGCCAATGGCAGCAAGCAGAGCAGCGCAGGGGAAAAAACGCCAAGCCATCCGAGCCACAGCAACGGGAAGGTGAAGAAGGAAAAACAGGTGCACGAGCCGGTCAGGACACCACAGGAGAGGAGTAAAATCTGCGAAAGACTCAGCTGCCATGTCCTCCAGGAGTCCCTGCTCAGCTCAGCCAGTGGATACAGTAACTATAGAGGCATCCTCAACTGGTGTGTGGTCATGCTGGTCTTGAGCAATGCACGCCTTTTCCTGGAGAATCTCCTAAAATATGGGATATTGGTGGACCCCGTCCaagttgtttcactgttcttaAAAGACCCATATAGCTGGCCTGCACCATGCCTTGTCATTGTCTCCAACGTGTTCATAATGGCAGCTTTGTACACGGAGCGGAGGCTATCTGTGGGCACCATCTCAGAGACGACTGGAACATTCCTTTACTTGGTCAATCTGACTACCCTCCTCTGTTTCCCATCAGCCACTGTGCTCACGCTGACCTCCATGACCCCAGCTGGTGGAGTCTTTGCCCTGGGTGTGTACACCATCCTCTTCATGAAGCTGTACTCCTATAAAGATGTTAACATGTGGTGCAGAGAGATTAGACATACCAAAGCCCGCACCCTGACCCGCTCCCATTCATGTCCATCTGTGGCCCAGTCAAATGGATCAGCTGTACATTCTCATGTGTCCTACCCTGGGAATCTCACACACAGAGATATATATTACTTTGTGTTTGCCCCAACACTCTGCTATGAACTGAACTTCCCCCGGTCACCACGGATACGCAAGAGCTTCCTGTTGAGGAGACTCTTTGAGATGCTTTTCTTCATACAGTTACTGATTGGATTGGTACAACAGTGGATAGTGCCGACGATTCAGAATTCCATGAAACCATTCCAGGTAAATATTGACATGTGTTGTCTGTTGGACTTCTGTCTATTCAACTGCCCCATTCCTTTGTACTTGGGGGGTGACTTAAGTTTCATGTACCCTCTATGGCAGGATATGGACTTTTCCAGAATGATGGAGCGCATGTTGAAACTGGCTGTTCCCAATCATTTAATCTGGCTCATCTTTTTCTATTGGTTTTTCCACTCTTCCATGAACTTCGTAGCTGAGCTGATGCAGTTTGGAGACAGGGAGTTTTACCGGGACTGGTGGAACTCTGAGACGGTCACTTACTTCTGGTCTAACTGGAACATTCCTGTGCACAAGTGGTGCCTCCGCCACTTTTACAAGCCCATCATGAGGAGGGGAGTGAATAAGTGGGTCGCCCAAACGGCCGTCTTCCTGGTCTCCGCCTTCTTTCACGAGtaCTTGGTGAGCGTTCCTCTGAAAATGTTCAGACTGTGGGCGTTTATGGGCATGATGTCTCAGATCCCACTCGCCTGGTTTGTTGGCCGCTTCCTGAGAGGTAACCATGGCAACGCTGCGGTCTGGATTTCGCTCATCATTGGCCAGCCCGTCGCCGTGCTGATGTACGTCCACGACTACTATGTAATACATTACATGTCACAATCATGAACAGTTGGTCGCAAGCAGAGAAGCAATACATTATACTAAAGGACAAATTGAATGTCAAATGTTTACTTTGAAAGGGAAATATTATATGAAGCTTGACTGAATAGTAAGAATTTTACACTAAGTAAATAGTTTGGCCTCCAGAAACAATTTCTCTAATGCACTTATACATCAGAGAGACTTGGCTCCCGTCCTATCATTGCTGTGAAACACTGCCCTGACAAAACTAGAGAACATTTGTAGGCCTTTTCTCTGTTTCTTACTTAGTCTACAATTATGAAGATCAACGCAGACATTCCTATAGATAACCCTTACTATCGGTGTACTGCTTTTTGTCATGCGTTTGACATGTCTTTTTTGCCTTTGATTAAATGACCTGACTTTTATTTGAAGTTGTGTGAACTCATGTGGCTGCAGTAATAACCAGTCACATGTATTGTGCATAAGTCAAGCCAAATATGTTATTACACTTGTGAAACTGTAATGTGTTTGCACTACAATGCATGCTGTTTgctaataaactttttttttttttttgctataatctttgtaaattatataaATGGAACTGGTGGAGTTGCACATGCAGCTAAGAAAAATATGGAAATGTCTGTTCTACTccattacaaccaactaattgcagcattaccacaaatggaagaggcaagtagaagggggagaaagtaaggaacttgtctgtcggcgcTGCGTTAAAGACGTTGTGGTAAAtagaaagtataccagtttcattttaAGGACCAAGAAAAATGTACAGCTGTTCCATATTGCAAAATAGCTAGGAAGAGATTTaaatgtaccgattccatggcacatgttTATGACCTGATACacaaaacaacgccggattcaaaactgtTTTTCAATTAAAAATGATAATGcaaaccaatagaatgttataggggctacaaccatcccagctctgcataTTGTGCTGCGAAAAGACAATCATtataatttgttttggtactgtccatatgtagcttgtttttggtcacaggttcaggaatggctgaaaaattgcaacatttacctggaggcGTTAACTcagcaaatagcactgctgggtgatttaaagTCAGTCAAATCGATCAATAATAACACTCTtggcaaaaaaaaaattaaaatctgTAAACTGAGAATAGAAAAGGTTCAGAACTTTGAAACGGCACAGTTAAAATATGGCAAGTATATATCAACTGGATGGTGAGATAGCTGGGAGGGGTGGAGTGCTAAAAACAAAACggtgtataagctggaagtagaagcctaaacATGGTTGTCCATTAGTTTCCTCCAATTAGGGAAGGGGTGGTAGTTAGGAGGAAAATATATTTACCTAAAGTCACAATCTGCAATAAAACTGATctacccctccccccaaaaaatgtactgAATAGACGAGTGCTCTTAAGATGATATTCAAAGAGCATCAGAGCTTAAGTACAATGTATTGTCAAATAAGTTGATGTTTTATATGCCAATATTGCCATCCTATTAAAAAGATGCTGGTGATCC
>XM_021572695.2
TCTCACCGATTTCATCGTCTGTTATTAAGCAAATTCGTATCTATGAATGGACTTTGAGCAAAAACACATGTTTATTAATAATATTTCACATATTTTATAGGACTTTTTTATAATGACTTAATCAAAAAGTATTAAAACGGTGCGCCATTTAGCAGTACAAAAATAACTTCAACTCCCGAAGTCCTCGTCGGTTCACTTCAGGACGACAGAGCGAGCCGCCGTAGAATCTCATACAAACTATCGCTCCTCCTCAATCAACCGAATGTTGACGTTTACAACAGGGACTGCAGCCCGCTCCTCTACAGCTTGCTGACAACACGGGCTGGACTTTCCAGCCGAGACTTGAGGTAGAAACGTCTAGTGCAATTCCAGCAAGATAAGGTTGAATGTATCAAATTTCGGAAATGGTCGACAGAAACGATAGAGTCCCCATGATGACAGGCAGGACAAGGAGATCAACCATCGGCCCCACGCCAGCGGGGGGCAATTCGAAACAAGCCAATGGCAGCAAGCAGAGCAGCGCAGGGGAAAAAACGCCAAGCCATCCGAGCCACAGCAACGGGAAGGTGAAGAAGGAAAAACAGGTGCACGAGCCGGTCAGGACACCACAGGAGAGGAGTAAAATCTGCGAAAGACTCAGCTGCCATGTCCTCCAGGAGTCCCTGCTCAGCTCAGCCAGTGGATACAGTAACTATAGAGGCATCCTCAACTGGTGTGTGGTCATGCTGGTCTTGAGCAATGCACGCCTTTTCCTGGAGAATCTCCTAAAATATGGGATATTGGTGGACCCCGTCCaagttgtttcactgttcttaAAAGACCCATATAGCTGGCCTGCACCATGCCTTGTCATTGTCTCCAACGTGTTCATAATGGCAGCTTTGTACACGGAGCGGAGGCTATCTGTGGGCACCATCTCAGAGACGACTGGAACATTCCTTTACTTGGTCAATCTGACTACCCTCCTCTGTTTCCCATCAGCCACTGTGCTCACGCTGACCTCCATGACCCCAGCTGGTGGAGTCTTTGCCCTGGGTGTGTACACCATCCTCTTCATGAAGCTGTACTCCTATAAAGATGTTAACATGTGGTGCAGAGAGATTAGACATACCAAAGCCCGCACCCTGACCCGCTCCCATTCATGTCCATCTGTGGCCCAGTCAAATGGATCAGCTGTACATTCTCATGTGTCCTACCCTGGGAATCTCACACACAGAGATATATATTACTTTGTGTTTGCCCCAACACTCTGCTATGAACTGAACTTCCCCCGGTCACCACGGATACGCAAGAGCTTCCTGTTGAGGAGACTCTTTGAGATGCTTTTCTTCATACAGTTACTGATTGGATTGGTACAACAGTGGATAGTGCCGACGATTCAGAATTCCATGAAACCATTCCAGGATATGGACTTTTCCAGAATGATGGAGCGCATGTTGAAACTGGCTGTTCCCAATCATTTAATCTGGCTCATCTTTTTCTATTGGTTTTTCCACTCTTCCATGAACTTCGTAGCTGAGCTGATGCAGTTTGGAGACAGGGAGTTTTACCGGGACTGGTGGAACTCTGAGACGGTCACTTACTTCTGGTCTAACTGGAACATTCCTGTGCACAAGTGGTGCCTCCGCCACTTTTACAAGCCCATCATGAGGAGGGGAGTGAATAAGTGGGTCGCCCAAACGGCCGTCTTCCTGGTCTCCGCCTTCTTTCACGAGtaCTTGGTGAGCGTTCCTCTGAAAATGTTCAGACTGTGGGCGTTTATGGGCATGATGTCTCAGATCCCACTCGCCTGGTTTGTTGGCCGCTTCCTGAGAGGTAACCATGGCAACGCTGCGGTCTGGATTTCGCTCATCATTGGCCAGCCCGTCGCCGTGCTGATGTACGTCCACGACTACTATGTAATACATTACATGTCACAATCATGAACAGTTGGTCGCAAGCAGAGAAGCAATACATTATACTAAAGGACAAATTGAATGTCAAATGTTTACTTTGAAAGGGAAATATTATATGAAGCTTGACTGAATAGTAAGAATTTTACACTAAGTAAATAGTTTGGCCTCCAGAAACAATTTCTCTAATGCACTTATACATCAGAGAGACTTGGCTCCCGTCCTATCATTGCTGTGAAACACTGCCCTGACAAAACTAGAGAACATTTGTAGGCCTTTTCTCTGTTTCTTACTTAGTCTACAATTATGAAGATCAACGCAGACATTCCTATAGATAACCCTTACTATCGGTGTACTGCTTTTTGTCATGCGTTTGACATGTCTTTTTTGCCTTTGATTAAATGACCTGACTTTTATTTGAAGTTGTGTGAACTCATGTGGCTGCAGTAATAACCAGTCACATGTATTGTGCATAAGTCAAGCCAAATATGTTATTACACTTGTGAAACTGTAATGTGTTTGCACTACAATGCATGCTGTTTgctaataaactttttttttttttttgctataatctttgtaaattatataaATGGAACTGGTGGAGTTGCACATGCAGCTAAGAAAAATATGGAAATGTCTGTTCTACTccattacaaccaactaattgcagcattaccacaaatggaagaggcaagtagaagggggagaaagtaaggaacttgtctgtcggcgcTGCGTTAAAGACGTTGTGGTAAAtagaaagtataccagtttcattttaAGGACCAAGAAAAATGTACAGCTGTTCCATATTGCAAAATAGCTAGGAAGAGATTTaaatgtaccgattccatggcacatgttTATGACCTGATACacaaaacaacgccggattcaaaactgtTTTTCAATTAAAAATGATAATGcaaaccaatagaatgttataggggctacaaccatcccagctctgcataTTGTGCTGCGAAAAGACAATCATtataatttgttttggtactgtccatatgtagcttgtttttggtcacaggttcaggaatggctgaaaaattgcaacatttacctggaggcGTTAACTcagcaaatagcactgctgggtgatttaaagTCAGTCAAATCGATCAATAATAACACTCTtggcaaaaaaaaaattaaaatctgTAAACTGAGAATAGAAAAGGTTCAGAACTTTGAAACGGCACAGTTAAAATATGGCAAGTATATATCAACTGGATGGTGAGATAGCTGGGAGGGGTGGAGTGCTAAAAACAAAACggtgtataagctggaagtagaagcctaaacATGGTTGTCCATTAGTTTCCTCCAATTAGGGAAGGGGTGGTAGTTAGGAGGAAAATATATTTACCTAAAGTCACAATCTGCAATAAAACTGATctacccctccccccaaaaaatgtactgAATAGACGAGTGCTCTTAAGATGATATTCAAAGAGCATCAGAGCTTAAGTACAATGTATTGTCAAATAAGTTGATGTTTTATATGCCAATATTGCCATCCTATTAAAAAGATGCTGGTGATCC

Function

NR:

description
diacylglycerol O-acyltransferase 1-like

GO: NA

KEGG:

id description
K11155 DGAT1; diacylglycerol O-acyltransferase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953468.1 False 3422 mRNA 0.43 17 62407415 62435133
XM_036953467.1 False 3562 mRNA 0.43 16 62407416 62435133
XM_021572695.2 True 3458 mRNA 0.43 17 62407418 62435133

Neighbor

gene id symbol gene type direction distance location
LOC110496670 LOC106588981 coding upstream 258877 62144489 ~ 62148538 (+)
LOC110496875 LOC106588980 coding upstream 397675 61994622 ~ 62009740 (+)
recql4 recql4 coding upstream 415618 61967906 ~ 61991797 (+)
LOC110496665 bop1 coding upstream 484500 61827912 ~ 61922915 (+)
LOC118941200 LOC106588959 coding upstream 618606 61774658 ~ 61788809 (+)
LOC110496877 LOC106588989 coding downstream 16269 62451402 ~ 62474282 (+)
LOC110496878 LOC106588982 coding downstream 48374 62483507 ~ 62484818 (+)
LOC110496879 LOC106588990 coding downstream 66898 62502031 ~ 62570890 (+)
LOC110496880 dennd3 coding downstream 144611 62579744 ~ 62624967 (+)
LOC110496881 LOC106588992 coding downstream 198914 62634047 ~ 62869394 (+)
G1571133 NA non-coding upstream 31330 62375700 ~ 62376085 (+)
G1571131 NA non-coding upstream 32948 62373828 ~ 62374467 (+)
G1571128 NA non-coding upstream 38013 62369124 ~ 62369402 (+)
G1571123 NA non-coding upstream 57899 62349247 ~ 62349516 (+)
G1571122 NA non-coding upstream 61494 62345719 ~ 62345921 (+)
G1571224 NA non-coding downstream 30975 62466108 ~ 62466509 (+)
G1571228 NA non-coding downstream 47546 62482679 ~ 62482904 (+)
G1571234 NA non-coding downstream 54532 62489665 ~ 62490105 (+)
G1571236 NA non-coding downstream 59888 62495021 ~ 62495274 (+)
G1571059 NA other upstream 145198 62261624 ~ 62262217 (+)
G1569099 NA other upstream 1791121 60609948 ~ 60616294 (+)
cdk6 cdk6 other upstream 2075115 60256707 ~ 60351422 (+)
G1568568 NA other upstream 2502211 59904164 ~ 59905204 (+)
G1571298 LOC106570403 other downstream 436836 62871969 ~ 62875067 (+)
G1573779 NA other downstream 2466035 64901168 ~ 64902474 (+)
G1573889 LOC106589019 other downstream 2538721 64973854 ~ 64975933 (+)

Expression


Co-expression Network