Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941226 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 62882523 ~ 62882641 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOC569167 protein, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118941226 | True | 119 | mRNA | 0.50 | 1 | 62882523 | 62882641 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496675 | LOC106570403 | coding | downstream | 7427 | 62871988 ~ 62875096 (-) |
| cfap20 | cfap20 | coding | downstream | 441412 | 62435815 ~ 62441111 (-) |
| zgc:63863 | LOC106588987 | coding | downstream | 475249 | 62384678 ~ 62407274 (-) |
| LOC118941001 | NA | coding | downstream | 783756 | 62043360 ~ 62098767 (-) |
| LOC118941000 | NA | coding | downstream | 846596 | 62018416 ~ 62035927 (-) |
| LOC110496678 | LOC106588996 | coding | upstream | 6708 | 62889349 ~ 62903227 (-) |
| csmd3b | LOC106588997 | coding | upstream | 50594 | 62933235 ~ 63759722 (-) |
| LOC118941202 | NA | coding | upstream | 1054644 | 63937285 ~ 63973473 (-) |
| LOC110496956 | rpl23a | coding | upstream | 1082430 | 63965071 ~ 63965588 (-) |
| LOC110496680 | LOC106589004 | coding | upstream | 1134562 | 64017203 ~ 64244837 (-) |
| G1571667 | NA | non-coding | downstream | 10812 | 62871169 ~ 62871711 (-) |
| G1571662 | NA | non-coding | downstream | 21576 | 62852634 ~ 62860947 (-) |
| G1571628 | NA | non-coding | downstream | 94790 | 62786772 ~ 62787733 (-) |
| G1571582 | NA | non-coding | downstream | 119161 | 62718958 ~ 62763362 (-) |
| G1571580 | NA | non-coding | downstream | 166177 | 62716101 ~ 62716346 (-) |
| G1571683 | NA | non-coding | upstream | 1354 | 62883995 ~ 62884368 (-) |
| G1571711 | NA | non-coding | upstream | 6053 | 62888694 ~ 62889035 (-) |
| G1571715 | NA | non-coding | upstream | 21198 | 62903839 ~ 62904068 (-) |
| G1571727 | NA | non-coding | upstream | 41937 | 62924578 ~ 62924892 (-) |
| G1572252 | NA | non-coding | upstream | 118968 | 63001609 ~ 63001825 (-) |
| G1570695 | NA | other | downstream | 1216613 | 61665328 ~ 61665910 (-) |
| elp2 | elp2 | other | downstream | 1558702 | 61267281 ~ 61323861 (-) |
| G1570468 | NA | other | downstream | 1589372 | 61291304 ~ 61293151 (-) |
| G1569439 | NA | other | downstream | 2188424 | 60693378 ~ 60694099 (-) |
| LOC110496651 | NA | other | downstream | 2266231 | 60610487 ~ 60642154 (-) |
| G1572487 | NA | other | upstream | 553157 | 63435798 ~ 63491169 (-) |
| G1573054 | NA | other | upstream | 1131138 | 64013779 ~ 64014965 (-) |
| G1573887 | NA | other | upstream | 2087650 | 64970291 ~ 64971167 (-) |
| G1575088 | NA | other | upstream | 2427402 | 65310043 ~ 65311051 (-) |
