LOC118941002


Basic Information

Item Value
gene id LOC118941002
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 64363624 ~ 64364283 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951077.1
ATGAGCACTCCCCCCGGACCTGCAAGACTCCCCCCGGACCTGCAAGACTCCCCCTGGACCTGCAAGACACCCACTGGACCGGCAAGACTCCCCCTGGACCTGCAAGACTCCCCCCAGACCTGCAAGACTCCCCCCAGACCTGCAATACTCCCCCTGGACCTGCAAGACACCCCCTGGACCGGCAAGACTCCCCCTGGACCTGCAAGACTCCCCCTGGACCTACAAGACTTTGCCCGGACCAGCAAGACTTTCTCCCAGGCTTGCAAGACCCCGCCCAGACCTGCAAGACGCACACCGAACTTACAAGACTCCCCCCGGACTAGCAAGACTCTCTCCCATACCTGCAAGACTCCCACCGGACCTGCAAGACTCCCCCCTGGAACTGCAAGACTCCCCCCTGGACCTGCAAGACTCCGCACAGACCAGCAAGACTCTCTCCCAGACCTGCAAGACTCCCCCCGGATCTGCAAGACTCCCCCCGGACCTGCAAGACTCCCCCTGGACCTGCAAGACTCCCCCTGGACCTGCAAGACTCCACCCAGACCTGCAAAACTCCCCCCGGACCTGCAAGACTCCCCCCTGGACCTGCAAGACTCTGCCCGGACTTGCACCCAGAGGACCTACAGCCAGAGTGCCTGCACCCAGATCACAGCAACATGA

Function

NR:

description
flocculation protein FLO11-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951077.1 True 660 mRNA 0.63 1 64363624 64364283

Neighbor

gene id symbol gene type direction distance location
LOC110496881 LOC106588992 coding upstream 1494230 62634047 ~ 62869394 (+)
LOC110496880 dennd3 coding upstream 1738657 62579744 ~ 62624967 (+)
LOC110496879 LOC106588990 coding upstream 1792734 62502031 ~ 62570890 (+)
LOC110496878 LOC106588982 coding upstream 1878972 62483507 ~ 62484818 (+)
LOC110496877 LOC106588989 coding upstream 1889342 62451402 ~ 62474282 (+)
wdyhv1 wdyhv1 coding downstream 278102 64642385 ~ 64644137 (+)
LOC118941003 LOC106570377 coding downstream 344084 64708367 ~ 64721281 (+)
LOC110496687 fusip coding downstream 369926 64734209 ~ 64741683 (+)
LOC100499585 LOC100499585 coding downstream 384225 64748508 ~ 64757588 (+)
LOC110496957 LOC106589002 coding downstream 397192 64761475 ~ 64765904 (+)
G1573312 NA non-coding upstream 8470 64354856 ~ 64355154 (+)
G1573311 NA non-coding upstream 11767 64351529 ~ 64351857 (+)
G1573300 NA non-coding upstream 33645 64329745 ~ 64329979 (+)
G1573255 NA non-coding upstream 75999 64286844 ~ 64287625 (+)
G1573029 NA non-coding upstream 122354 64238125 ~ 64241270 (+)
G1573321 NA non-coding downstream 4276 64368559 ~ 64368891 (+)
G1573347 NA non-coding downstream 42539 64406822 ~ 64407132 (+)
G1573350 NA non-coding downstream 44541 64408824 ~ 64409067 (+)
G1573438 NA non-coding downstream 95431 64459714 ~ 64460104 (+)
G1573458 NA non-coding downstream 119176 64483459 ~ 64483732 (+)
G1571298 LOC106570403 other upstream 1488557 62871969 ~ 62875067 (+)
G1571059 NA other upstream 2101407 62261624 ~ 62262217 (+)
recql4 recql4 other upstream 2389882 61967906 ~ 61991797 (+)
G1573779 NA other downstream 536885 64901168 ~ 64902474 (+)
G1573889 LOC106589019 other downstream 609571 64973854 ~ 64975933 (+)
G1573958 NA other downstream 729737 65094020 ~ 65095356 (+)
LOC110496708 srsf4 other downstream 1419780 65780334 ~ 65798684 (+)
LOC110496718 NA other downstream 1858040 66221858 ~ 66228697 (+)

Expression


Co-expression Network