LOC110496688 (LOC106589014)


Basic Information

Item Value
gene id LOC110496688
gene name LOC106589014
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 64766115 ~ 64769287 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572716.2
TTGGTGCTCCAGGCAAACGCTGTTTCACTACATGGCCAAGAGATGGCGCCAAATATATAGCTAGGGGGTTTTGCCTTTTACACAAGTAGCTCAGTTTCAGTTTCATTTATTGAATAGCAAATAGTGAAGTAACCGACAGAGTATAGAAAAGTCCATCTTCATATTAGAACATCATCAATCATTGACATTTTATCCCATAATTCACAGTTCAGATAATTGTTTTGTTGTCGTTTCTGTCGTTGTAGCAACCGCACCACTGTGGGAGAAATTGCTTTGTTTGCAGTCGGGCTCTGGGTCTTGTCGGCTGTTGCgttgattagctagctagtttactaACCTTTAATCATCCTAACGCTACATATCTGTTCGCAATAATGGCCCATTACAGAGCTTCCGAGTCCAAGAGAGAACAATTTCGAAGGTATCTAGAAAAAGCTGGAGTTCTTGACAGTCTCACCAATGTGTTGGTCGCCCTGTACGAGGAGCCAGATAAACCTAATAATGCTTTGGACTTTCTAAAGCATCACCTTGGTGGGGCTGGTGCTGAGCCAGGAGACACGGAGGCCCTTCGTCTGGAGCTAACTGAGCTACAGCAGAAGTGGGATCTGCTCATGGAGGAAAACAAAGACCTCAGAAACAGGCTTCTGCAGTATGAACCAGCACCCGAGGATGGAGCAGCAGAGTAGCGGAGGTGGTTGAATTGTTCTTTTTGTCCACTGTTTTGAGAGAAAAAAGGcactttttttgttatttcttagTAGTATAATGACACTATACCCAAGGATGGAAAAACTGTTAATTGCAAAAGCAATGTCTTTTTGTTAAGTAGTATTTTCTGTGTACAGGCACTTGTTCAATCTAAAGCGTCAACTGTTTCTCTCCAATTTCAAGTCAATAAATACTATTTTCAGCAAA

Function

NR:

description
C-Myc-binding protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572716.2 True 915 mRNA 0.42 5 64766115 64769287

Neighbor

gene id symbol gene type direction distance location
LOC110496684 kdm1b coding downstream 70111 64680203 ~ 64696004 (-)
LOC110496685 dek coding downstream 88783 64673859 ~ 64677332 (-)
LOC110496683 sdha coding downstream 102907 64649122 ~ 64663208 (-)
si:rp71-45k5.4 LOC106570382 coding downstream 117360 64644060 ~ 64648755 (-)
LOC110496680 LOC106589004 coding downstream 521278 64017203 ~ 64244837 (-)
LOC110496691 LOC106589015 coding upstream 59042 64828329 ~ 64833323 (-)
LOC110496694 LOC106589019 coding upstream 204544 64973831 ~ 64987996 (-)
LOC110496698 LOC106570363 coding upstream 287369 65056656 ~ 65121056 (-)
LOC110496890 LOC106570358 coding upstream 745655 65514942 ~ 65601901 (-)
LOC110496703 NA coding upstream 841653 65610940 ~ 65620200 (-)
G1573712 NA non-coding downstream 54480 64711125 ~ 64711635 (-)
G1573711 NA non-coding downstream 55132 64710754 ~ 64710983 (-)
G1573705 NA non-coding downstream 60465 64704357 ~ 64705650 (-)
G1573703 NA non-coding downstream 64907 64700851 ~ 64701208 (-)
G1573702 NA non-coding downstream 66122 64699794 ~ 64699993 (-)
G1573729 NA non-coding upstream 169 64769456 ~ 64769863 (-)
G1573750 NA non-coding upstream 42411 64811698 ~ 64812466 (-)
G1573755 LOC106579309 non-coding upstream 52108 64821395 ~ 64821745 (-)
G1573757 NA non-coding upstream 54000 64823287 ~ 64823620 (-)
G1573762 NA non-coding upstream 66063 64835350 ~ 64835585 (-)
G1573054 NA other downstream 751150 64013779 ~ 64014965 (-)
G1572487 NA other downstream 1274946 63435798 ~ 63491169 (-)
G1570695 NA other downstream 3100205 61665328 ~ 61665910 (-)
elp2 elp2 other downstream 3442294 61267281 ~ 61323861 (-)
G1573887 NA other upstream 201004 64970291 ~ 64971167 (-)
G1575088 NA other upstream 540756 65310043 ~ 65311051 (-)
G1575282 NA other upstream 1028343 65797630 ~ 65798675 (-)
G1575457 NA other upstream 1245182 66014469 ~ 66053735 (-)
G1575475 NA other upstream 1286395 66055682 ~ 66056239 (-)

Expression


Co-expression Network