XLOC_034335 (si:cabz01080528.1)


Basic Information

Item Value
gene id XLOC_034335
gene name si:cabz01080528.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 864492 ~ 878473 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00067033
TTTTCCACCCGCCGCCCAACTGCAGGATCAGAGAGGTGCATTGTGGGAGTCAGGTCCGGCTTGTCGTCATAGCGATCCGAGACATTGCCAAAGGCGAGGAGATAACTGTGGACTACAGCCTGACGGACTGGGGGGAAAACGCCATGGGTTTCCACAGTTCAGTGTCTCCACGCGGGTTTGACTGTGGGTTTAATCCAGAAAGCAACATCAAGAAGGAGGAGGATCCGGGTGCTCTGCCCCTGTCTCTCACTGTTTCAGACTACCTCACTCCATCATGGTCACTGTCGCCCTCCTCCAGCCCGCTGTCCCACTCCGAGGCCAGTGACTCCGACAGAGAGGAGGATGAAGAAGAGGAAgacgatgatgaagatgatgacgatgaagaggagctggaggagctgAGGGGTCGAATGATGAGACGCCGCAAGAAGAGAAAAACCTCCACCAGCATCAAGAAGAAGACTCAGCCACACCCCCTTTCCTTCACTCGCCCCGCCTCCTCATCCCCCTCCCCCTTCCAGCAGCCTCAAGCCCCGCCCACCACCAAtataaacaacaacatcaacataaACATCGGTGCGAGCGGCACACTGTCCCGCCGCCAGCACTGTCCATACTGCGGACGCCACTTCCGCTCACTCGCGCGCCACCTAGAGAAACACCACGATCAGCAGCCCGAAGTCAGAGCCGCAATGGAGCTATCGCACGCTCCCACACACACCccgaacacaaacacacacacgtttccATCTCCAGCCCAGCCCTCGTCTTCTCTGGGGCCGTCGTTGTTTTCCAGGGAGCGCGAGTCTATTTCGTCTGCTACTAAACCGGCGGGTGTTTCCTTTTCTCTTTCGCTGGCTTCTCCTCCATCTAGCGCCACCACCAAGAAAAGCTGTAGTACTCCTAGGAAGAGTGTTAAGAAGAGTCCCGGGACGCCGCCGGCACGGAGAGGACGACCACCTAAGAAGAAGGAGGACAAGGAGAaggagaaagagaagaagaagcaggaggagatggagagagagaaggagaaagaGGAGCCGCCGCCACCCACACCGGGGAaagtagaagaagaagaggaagaagaggtggaggaggaggaggaggtggtcaACATGGTGGAGGATGAAGGAGCTGAAGAGAAGAAGACAGAAATGACGAGGCCTCAGCGCTCCCACATGCCCCCTCTGCTGTCGTCTCTGTCCACGCTAGTGTTGTTCCTGCGCCGGCAGCAGCACTCCTCCTTCCTCTCGCTGTCCCGCGCGCCGGGCTCTGCTGAATCCTGGCGTCAGCTGTGCCACTCCAGCCTGGCTCTGCTGCTCCTCTATAACCGGCACCGGGAGTGTGAGGTGTCCAAGCTGACGGTGCAGGACTACCACAGCCGGAGCTCCGCAGCCCCGCTGGACAGTGCACTCTGCCCGTTCGAGCGCCAGGTGCTCTGCCATCTGTCCCGCGTGCCGGTGCTGGGCAAACGAGGCCGTGTGCAGCCGCTCATCCTGCCACCGCACTCTGAAACCTGCCTGGACCTGCTCCTCAAGACGTCTGCAGATGTGGGTGTGGACCCCGAGAGCCCGTATGTGTTCTCCAGACCGTACCACTCTCCGGCTACACCTCTGCGCGGGACAGACCTGCTGCGGAGCCTGGCACGGAGCAGCGGAGCCAAGAACCCAGCATGTCTGACTGCCCCGCGCGCCCGCCGGCAGATCGCCATCCTCACCCAGCTGCTGCTGCTGGAGGAGGGCGCCGCCACCAAACGCCTGGAGGACTTCCTGCAGAGAGAGTACCATGTGACCCAGAGCTGCGCTGGGATTGGCCAGGACCCGGCGCTGATGAACCGTGTGGGCAGGGTGGTGCTGTATGGCGAGCGGGAAGGCGTTCTGTTCAGAGGCATGAGTCTGCAGCACATCTGCCTCGAGCTCGACGTGATGTCTGGAAACTCGGCCGACTCGTTCTCGGAAAACTCTGATGCGGAGGCCAGTAAGGTTAAGGAGAAAGCTGAACCGGTGAAGAAGAAATCCAGAGGTCGAGTTTCACGGGTGAAGAAGGGAACCGGTGTGCGAGTGTGTGCTGCTGCAGCGCCACCATCAACCGCACACAAGAGACGCAGCGTCGCACAGGTCAAAACAGgtaaGCGTGGCGTGCTGAAGCGTCCGTGGTCGGAAGCGGAGCGCGTGTCGGTGGAAACGCACCTGAAGCAGAACATCCTGGAGCTGCGAGTTCCTGCTAAAGCAGACTGTGAGCGCTGTCTGCAGCTCTGCCCCCTGCTGGCCAGCAACCAGCGCGACTGGAGGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105657

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00067033 True 2292 mRNA 0.60 6 864492 878473

Neighbor

gene id symbol gene type direction distance location
XLOC_034334 NA coding downstream 9530 828990 ~ 854962 (-)
XLOC_034333 CABP4 coding downstream 40997 808916 ~ 823495 (-)
XLOC_034332 rela coding downstream 59977 778297 ~ 804515 (-)
XLOC_034331 drap1 coding downstream 111261 742517 ~ 753231 (-)
XLOC_034330 MAP3K11 coding downstream 129374 637597 ~ 735118 (-)
XLOC_034336 NA coding upstream 36247 914720 ~ 1036789 (-)
XLOC_034337 NA coding upstream 106431 984904 ~ 985757 (-)
XLOC_034338 NA coding upstream 112018 990491 ~ 991614 (-)
XLOC_034339 NA coding upstream 177201 1055674 ~ 1061239 (-)
XLOC_034340 dctn1a coding upstream 184499 1062972 ~ 1108935 (-)
XLOC_034329 NA non-coding downstream 652713 210475 ~ 211779 (-)
XLOC_034328 NA non-coding downstream 690854 172766 ~ 173638 (-)
XLOC_034341 NA non-coding upstream 233830 1112303 ~ 1136586 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000200_00612625_00617263 NA coding CI01000200 null 612473 ~ 617263 (-)