LOC118941206


Basic Information

Item Value
gene id LOC118941206
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 66080454 ~ 66094549 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037534.1
tttcctctccctccctctctctctctctctctctctctctctccgtttcgcCTGTGGAAAACCATGTCTGCCGTAGTGCTTGGCATTCCTGCGGTTTGACTTTGACACTTCCTGTCCTAAACGAGAATCGCGGCTGCAAGTAAAGAACATTCCTACAGTCTTGtagtttttcttcttcttcgtcttaaCTTTGTTCATTTTATTAGTTCAGTTTTGTATTTCTTGAATGAAAAGAACGTTAGCCTCTTATGTAAGTATGTCATGTATTTATATAGAGTTTTAAATTACTGTTGTTTGTTCACTGGCATAATAACAACACACTATGCCTAATTGTAGATGTAAGAGAATGAATTGGACTGTTGGTAATAGTACCAGAACCACAGGCCAATTTCAACCCTAGCTAATACAGGTAGTACAACCACAAAGTTACCATGTCTCATTCATTCAGTGTCcctttacacactgtacacacatgtgcgctcacacaaacatatactgaacacaaacacaatgaccccccctccccccacacacacacaccctccacccacacatatacacacagcattTACCTTACATTGCTTATGTGTACCTGTGCAACGTAACaaccatacagacagacagacactgttaaCCAAGTTCTCTCACAATGgggctactgactgactgactgactggctggctggctggctgactggctggctggctggctggctggctgaccacAGACTGAACAAAGCTCTTTATAGTGTCAGAAACAGGAAGCCACGTACAACGAGCTGATTGCTCTCCTTTTCCGTTTGCTGTTTGTCATACACCTGCCTTTAAACCCTGCTTTGTTCCTGActtactggttgcccttttcccactgcaaacaaacacacacacatacacacgtacacacacacacacactaactctgTAATCCATTTATACAGCTGCaggttttcagagagagagagagagagagagagagacagagagagacagacagagagagacagagagagacagagagacagagcacaTCAGCTGTGAGTTACTCCTAGATTTTGcttggagacagacagatagacagacagtcaCCGTGCAGATGCGTCACTGGTGTTATTAACGAACCAGCCGGCCCCAACAACAGCTACATTTAGAAAGTCCTGGGcttctcaaaaaaataaaaaaaacggtgCGTGTTATTAACGAACCAGCCGGCCCCAACAACAGCTATATTTAGAAAGTCCTGTGCTTCtcgaataaaaaaaataaaaaacgtcaAACAACAATGAAAGGTGAACCGCTAATAGAGTTTAGGTCAGCTGCCATAACTTTGAATTGTGGATGGAACTTGTTCTCATTCAGCGACAGCTAGTGGCTACAGGCTACACTTAATGGCTACCACCTGTGCTGCAGGGAAAGTCTGTAATTGGACAATGTGTTTACATGGCCATAGAGCGTACAGAGTTTCAGAGTCACCTACTGCCCTCCTTCAACACAGAGGTTTAAAAAGGGGAATCTGCAGTTCACAATTAACAGGTATATATTATCAATTTGAAAGTCCAAAAATATGTACCAAAATGCAGATTTCCCCCTTTAACCTAAACCACACTGGGAACAGTTGATCTGTCAGTCTTCTCAACGGTCAAGCCTGGATATAAACAGAGTAATAAATCAATCGTGCTGTGCCAAACGATGGTAACTGCTGTTTGGGTTGTTTACATTGCTCGTACATCTAGGGCCAGGAGATTCTCCTGGTCAGGTTATGTTGTCTAGACTAACTCAGGGTCTAACCCATACGCTTACATTGCTGTCGctaagcagacactcttatccagaccaactaacagtagtgagtgcataaattgaattgaacccacaaccctttgcaagcgtcatgctctactaactgagccccACTGTGCCATTCTGGCTAGACACTCGACAGTGAGTAGATGAGGATCAGGTGCCCTCCCTtggcccctcctctccttcttccttaaTACCGTAAACCGGTAACGTAAGTCTGACCTTTTCCTTTAACTcaacaagaaacaacaaaaaaacaagacaatAAAAGGAGTGAAGACCTGTGTCCAGTAACACACGTTGTGATCACCAATAAATACCCTACTTCCTGCCTCCTACGTCATACTTCGTACTTCCTGCCTCCTACTTCCTGCTTCCTACTTCCTGCCTCCTACGCCATACTTCCTACTTCCTGCCTCCTACGTCATACTTCCTACTTCCTGCCTCCTACATCATACATCCTACTTCCTGCCTCCTACTTCCTGCTTCCTACTTCCTGCCTCCTACGTCATACTTCCTACTTGCTGCCTCCTACTTCCTGCTTCCTACTTCCTGCCTCCTACGTCATACTTCCTGCCTCCTACGTCATACTTCCTACTTCCTGCCTCCTACGTCATACTTCCTACTTCCTGCCTCCTACTTCCTGCTTCCTACTTcctgcctccttccctctccctccagccTCCTACATCCTGCTTCCCTGCTGTGTTATGCTATCCTCCTGTACGGGTCAGATCACATGGCCAGTTGGATCAGACTGTTAGCGCATCCAATCCTCCAACCGCCACTAATTTCAGCATATTTATCCTAACATGCATATATAACTTGTTTTCTGCCTGGCCTGGCTTAACAGGTGTCTTGGGGggcttttagtgtgtgtgtgtgtgtgtgtgggggggcaaggaaggaaggaaggaaggaggtgtgtgtttgtgtgtgcgtgcgtgggttCTATCAGGTCCTGGGGTTCCTGGCTGAACCGTGGTCCTGGCTGAACCGTGGTCCTGGCTGGCCCGTGGTCCTGGCTGAACCGTGGTCCTGGCTGGCCCGTGGTCCTggctccctcacacacacccagGCCCTATGTGGCCGGACGAAACACAGCTGACGAAAAACACAAGTTTACTGGAATCGTCTGTCCATCCAAACGGGAATGTGGGGACAGCAGAGGAAGGGATTGGAACGTTTCACAGAACAAGGAAAGCCAACATGTGTTTGGCTCATCCTGGTTCACCTCAACCAAGGGGAAGGACTGGAGGCTGGACATGAACCTGAACATGGTTTACTGGCTTGGCTTCCACTGAGGATAAAGGGCCATTACCGGCTGACTTTTGGGTCTGACTGCTGGACAGGTGTGGATGGGATGAGGAAACAAGTGTGCGTGTGCACTCATGCATGactacgtgtgcgtgtgtgtgtacgagaAACACGGAGAAGGTTTTGTTGTCCGGGTTGTGGGAtatgtgccagtgtgtgtgtgtgatgtgtgtatgtgtgtgatgtgtgtgtgcgtgtgtgtccgtgtgcgtgtgatgtatgtgtgtgtgttttagggacgATCTCTGCGTGGAATGTCTGCGGTGCAGACTGGAACCCCTGTCTTTCAGTCATTCCAGAACCCTGTGACACGGCTGGCTGTGTGGAAGGACAGACCGATGTTCTGGAACGGACATTACCTCAACACTCTATTCCCCACTACAGAGGAATCTCTCTTTGAAAAGCGGAACCCCAAAAATACATCCCTTAAAGCTTCACCTTGATTGAAACAGCAGAGAACCTCACTGatactgaaaaaaaaaaagtattatgtTTATTTTATAATATTTTGATATAATTTTTTTCAGCTCTATAGTTAACCTATTGAATAAATTCAATAGATGTGTCACTTACGAACACAAAAGCAGATCATCCATTCTCATAAACCATCAGATAGTGTTAACATTATGGGATGGTGAAGGAAGGGCATTACTTTTAATACACAtcggtgcccggggaacagtgggttaactgctctgctcgggggcagaacgacatatttttacctcgacagctcggggattcgatccagcaacctttcggttactggcccaactagTAGTGCACACGTACATGCATATAAATAGCCATATACTGAAAATACAGAAAAATACAGGCCCAGCCTAGGAGTTTAGATGTCATCTATGCAGAAATGTTAAATGGATTAATTTATTCTGAACAGAATTGGACACTTTGTACATGTCTTTCAGATATTTTCCCATGTTTCAGGAGAAAGGTCTACTGTTCTCAGCAGCATGGCATACCGAAGAGCTGGAGTTATTAAGGATTTCATCAAGTTGACTTACGCATGCAAATCAGAGTCCATGGAAATACCTTCAGCTTCCCATTCGTTATTTACGAAAGGTTTCCTTTAGTTTACCATTCTCTATTTACTAAACTTTTCCTTTAGCTTCCCATTCTCTATTTACTAAACTTTTCCTTTAGCTTCCATTCTCTATTTACTAAAGGTTTCCTTTAGCTTCCCATTCTCTATTTACTAAACTTTTCCTTTAGCTTCCATTCTCTATTTACTAAACTTTTCCTTTAGCTTCCATTCTCTATTTACTAAACGTTTCCTTTAGCTTCCATTCTCTATTTACTAAAGTTTAATTTAGCTTCCCATTCTCTATTTACTAAAGGTTTCCTTTAGCTTCCCATTCTCTATTTACTAAACTTTTCCTTTAGCTTCCATTCTCTATTTACTAAACTTTTCCTTTAGCTTCCATTCTCTATTTACTAAACTTTTCCTTTAGCTTCCATTCTCTATTTACTAAAGTTTAATTTAGCTTCCCATTCTCTATTTACTAAAGGTTTCCTTTATCTTCCATTCTCTATTTACTAAACTTTTCCTTTAGCTTCCCATTCTCTATTTACTAAAGGTTTCCTTTAGCTTCCCATTCTCTATTTACTAAACTTTTCCTTTAGCTTCCCATTCTCTATTTACTAAAGGTTTCCTTGGggtggggtgggcagtctatgttcttttttctataatttgggatttctgtgtttggcctggtatggttctcaatcagaggcagctgtcaatcgttgtccctgattgagaaccatacttaggcagcctggtttcaccttcacctgagttgtgggtgattatttttccgtttcagtgtttgcacccTTCGGGACTTTTTCGGGTTTTCATTTTGATTCTCTTGGTCTTTTTTGTAATTTTGTATTCATTTTTCCATTAAATGACATTATGgatacata

Function

NR:

description
titin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037534.1 True 5070 mRNA 0.44 2 66080454 66094549

Neighbor

gene id symbol gene type direction distance location
LOC110496714 LOC106589042 coding downstream 12358 66051635 ~ 66068096 (-)
epb41a LOC106589039 coding downstream 40983 65894984 ~ 66039471 (-)
xkr8.3 xkr8 coding downstream 299432 65770915 ~ 65781022 (-)
LOC110496706 LOC106589031 coding downstream 312466 65755121 ~ 65767988 (-)
LOC110496703 NA coding downstream 460254 65610940 ~ 65620200 (-)
LOC118941204 NA coding upstream 19068 66113617 ~ 66117779 (-)
LOC110496715 LOC106589043 coding upstream 42899 66136708 ~ 66167671 (-)
LOC110496892 LOC106589045 coding upstream 76147 66170696 ~ 66179591 (-)
LOC110496716 LOC106589044 coding upstream 86028 66180396 ~ 66215207 (-)
ppp1r11 ppp1r11 coding upstream 145975 66238098 ~ 66242725 (-)
G1575480 NA non-coding downstream 3059 66077196 ~ 66077395 (-)
G1575478 NA non-coding downstream 4416 66075830 ~ 66076038 (-)
G1575472 NA non-coding downstream 31703 66046470 ~ 66048751 (-)
G1575456 NA non-coding downstream 69452 66010787 ~ 66011002 (-)
G1575454 NA non-coding downstream 70553 66009662 ~ 66009901 (-)
G1575510 NA non-coding upstream 39332 66133881 ~ 66134171 (-)
G1575413 NA non-coding upstream 40274 66134823 ~ 66135289 (-)
G1575514 NA non-coding upstream 57824 66152373 ~ 66152767 (-)
G1575475 NA other downstream 24215 66055682 ~ 66056239 (-)
G1575457 NA other downstream 26719 66014469 ~ 66053735 (-)
G1575282 NA other downstream 281779 65797630 ~ 65798675 (-)
G1575088 NA other downstream 769403 65310043 ~ 65311051 (-)
G1573887 NA other downstream 1109287 64970291 ~ 64971167 (-)
G1575541 NA other upstream 206866 66301415 ~ 66305176 (-)
LOC110496725 LOC106589055 other upstream 708875 66802870 ~ 66810492 (-)
G1575774 NA other upstream 732033 66826582 ~ 66826877 (-)
LOC118941007 NA other upstream 775342 66857937 ~ 66870926 (-)

Expression


Co-expression Network