LOC118941007


Basic Information

Item Value
gene id LOC118941007
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 66857937 ~ 66870926 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118941007
ATGGGCTGGTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACCAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACTAGCACTCATCCAGCCTCGTCCCCTACTAGTCGTCATGGGCTCGTGTACACTAGCACTCATCCAGCATCGTCCCCTATCAGTCGTCATGGGCTGGTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACCAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACTAGCACTCATCCAGCCTCGTCCCCTACTAGTCGTCATGGGCTCGTGTACACTAGCACTCATCCAGCATCGTCCCCTATCAGTCGTCATGGGCTGGTGTACACTAGCACACATCCAGCCTCGTCCCCTATCAGTCGTCATGGGCTCGTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACCAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCAAGGGCTCGTGTACACCAGCACTCATCCAGGCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACCAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACTAGCACTCATCCAGCCTCGTCCCCGACCAGTCGTCATGGGCTCCTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCCTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCCTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCCTctgctgtgtctttcactgacagagacagaaagacacagagagagagagacagagagagagacagagagagagacagagatatatatagagagagatagagagagagacagagagagagagacagagagagagacagagagagagatagagagagagagagacagagagagagagacagagagagagagacagagagagagacagagagagagagacagagagaaagacagagagagagagacagagagagagagacagagacagagacacagagagagacagagagagagagacagagagagagagagagagagagagagagagagagagagagagagacagagacagagagagagagagagacagagacagagacacagagagagacagagagagagagacacagagagagagagagagagagagagagagagagagagagagagagagacagagacagagacagagacagagacacagagagagagagacagagagagagacagagagagagacagagacagatatatatatagagagagatagagagagagacagagacagagacagagagagagagacagagagagagacagagagagagacagagacagagatatatagagagagagatagagagagagacagagagagagagacagagagagagacagagagagagatatagagagagagagagacagagacagagagagagagacagagagagagagacagagagagagacaaagagagagagacagagagagagagacagagacagagagagagagacacagagagagagagagagagagagagagagagagagagacagagagacagagacagagacagagagagagacagagagagagagacacagagagagagagagagagagagagagagagagagagagagacagagatatatatagagagagatagagagagagacagagagagagagagacagagagagagacagagagagagatagagagagagacagagacagagagagagagacagagagagagagacagagagagagagagacagagagagagagagacagagagagagagagagagagagagagagagacagagacacagagagagagagagagagagagagagagagagagacagagagagagagacagagacacagagagagagagagagagagagagagacagagagagagagactgaaataaCGTAG
>TU1803003
CACCAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCGTGTACACTAGCACTCATCCAGCCTCGTCCCCGACCAGTCGTCATGGGCTCCTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCCTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCCTGTACACTAGCACTCATCCAGCCTCGTCCCCTACCAGTCGTCATGGGCTCCTGTACAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107389242

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118941007 False 2261 mRNA 0.60 3 66857937 66870926
TU1803003 True 309 TUCP 0.60 1 66869891 66870199
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110496725 LOC106589055 coding downstream 47445 66802870 ~ 66810492 (-)
LOC110496895 NA coding downstream 68943 66787048 ~ 66788994 (-)
LOC110496726 LOC106593810 coding downstream 82856 66748182 ~ 66775081 (-)
LOC110496727 LOC106589058 coding downstream 161610 66693338 ~ 66696327 (-)
ddx39b uap56 coding downstream 544038 66294113 ~ 66313899 (-)
LOC118941008 NA coding upstream 187198 67058124 ~ 67058673 (-)
sox4a LOC106589061 coding upstream 237652 67105914 ~ 67112583 (-)
LOC110496729 LOC106589066 coding upstream 454944 67325870 ~ 67337196 (-)
srfbp1 LOC106589067 coding upstream 470462 67341388 ~ 67348984 (-)
fndc5b LOC106589070 coding upstream 536386 67407312 ~ 67441367 (-)
G1575780 NA non-coding downstream 21013 66836540 ~ 66836924 (-)
G1575747 NA non-coding downstream 55466 66799157 ~ 66802471 (-)
G1575765 NA non-coding downstream 59754 66797150 ~ 66798183 (-)
G1575762 NA non-coding downstream 66886 66790109 ~ 66791051 (-)
G1575739 NA non-coding downstream 102495 66752695 ~ 66755442 (-)
G1575802 NA non-coding upstream 5984 66876910 ~ 66877138 (-)
G1575804 NA non-coding upstream 10527 66881453 ~ 66891836 (-)
G1575805 NA non-coding upstream 22188 66893114 ~ 66894046 (-)
G1575814 NA non-coding upstream 37404 66908330 ~ 66910169 (-)
G1575820 NA non-coding upstream 47219 66918145 ~ 66918676 (-)
G1575774 NA other downstream 31060 66826582 ~ 66826877 (-)
G1575541 NA other downstream 552761 66301415 ~ 66305176 (-)
ppp1r11 ppp1r11 other downstream 615241 66238098 ~ 66242725 (-)
G1575475 NA other downstream 801698 66055682 ~ 66056239 (-)
G1575977 NA other upstream 332275 67203201 ~ 67203487 (-)
G1576222 NA other upstream 530522 67401448 ~ 67441976 (-)
G1576491 NA other upstream 1044262 67915188 ~ 67955212 (-)
LOC118941211 NA other upstream 1751322 68622013 ~ 68626119 (-)

Expression

LOC118941007 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 2.
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LOC118941007 Expression in each Bioproject

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LOC118941007 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network