Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941008 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 67058124 ~ 67058673 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036951080.1 | False | 426 | mRNA | 0.62 | 1 | 67058124 | 67058549 |
| TU1803115 | True | 335 | TUCP | 0.62 | 2 | 67058177 | 67058673 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941007 | NA | coding | downstream | 187198 | 66857937 ~ 66870926 (-) |
| LOC110496725 | LOC106589055 | coding | downstream | 247632 | 66802870 ~ 66810492 (-) |
| LOC110496895 | NA | coding | downstream | 269130 | 66787048 ~ 66788994 (-) |
| LOC110496726 | LOC106593810 | coding | downstream | 283043 | 66748182 ~ 66775081 (-) |
| LOC110496727 | LOC106589058 | coding | downstream | 361797 | 66693338 ~ 66696327 (-) |
| sox4a | LOC106589061 | coding | upstream | 50029 | 67105914 ~ 67112583 (-) |
| LOC110496729 | LOC106589066 | coding | upstream | 267321 | 67325870 ~ 67337196 (-) |
| srfbp1 | LOC106589067 | coding | upstream | 282839 | 67341388 ~ 67348984 (-) |
| fndc5b | LOC106589070 | coding | upstream | 348763 | 67407312 ~ 67441367 (-) |
| LOC118941009 | NA | coding | upstream | 485012 | 67543561 ~ 67558111 (-) |
| G1575886 | NA | non-coding | downstream | 6150 | 67051682 ~ 67051974 (-) |
| G1575885 | NA | non-coding | downstream | 6526 | 67051379 ~ 67051598 (-) |
| G1575867 | NA | non-coding | downstream | 30341 | 67027519 ~ 67027783 (-) |
| G1575854 | NA | non-coding | downstream | 50604 | 67007184 ~ 67007520 (-) |
| G1575820 | NA | non-coding | downstream | 139448 | 66918145 ~ 66918676 (-) |
| G1575894 | NA | non-coding | upstream | 13693 | 67072242 ~ 67072653 (-) |
| G1575905 | NA | non-coding | upstream | 58624 | 67117173 ~ 67117386 (-) |
| G1575907 | NA | non-coding | upstream | 61072 | 67119621 ~ 67119917 (-) |
| G1575910 | NA | non-coding | upstream | 68433 | 67126982 ~ 67127425 (-) |
| G1575774 | NA | other | downstream | 231247 | 66826582 ~ 66826877 (-) |
| G1575541 | NA | other | downstream | 752948 | 66301415 ~ 66305176 (-) |
| ppp1r11 | ppp1r11 | other | downstream | 815428 | 66238098 ~ 66242725 (-) |
| G1575977 | NA | other | upstream | 144652 | 67203201 ~ 67203487 (-) |
| G1576222 | NA | other | upstream | 342899 | 67401448 ~ 67441976 (-) |
| G1576491 | NA | other | upstream | 856639 | 67915188 ~ 67955212 (-) |
| LOC118941211 | NA | other | upstream | 1563699 | 68622013 ~ 68626119 (-) |
| G1577745 | NA | other | upstream | 1690063 | 68748612 ~ 68787686 (-) |
