fndc5b (LOC106589070)


Basic Information

Item Value
gene id fndc5b
gene name LOC106589070
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 67407312 ~ 67441367 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953587.1
agagagagagagagagagagagagctggagagagagaggatttttgCCATCTGACAGTGCCAGTACGTTTCATTCTGCAGCACTCGAGCTCTCGGGGAGCGCGCCTCTGTAACGAAGCACCGCACAAGGGAAAAAAATAACCTAAACGAGTCCGTGCCGACCGTGCCTCCCGGTCTCGGCTCTGTCCCAGGTGCTGAAAGCGCTGGTGGTGCGTTTCCGTAGCAACCAACGACCAAGTTTAGGCTACACCGCCAATACTGATTTCTTATGACAACAGGAAACCCCGAGTGGTGGAGGAAAGGAGCCCAGTGCGGTGAATGTTAAGCAACTCTCCGCCACAGACCGAGGTGTGGATCCCGTTAACGCGAATAAATGGGATATTCGGTTGGCCGGGCAGGATGTAAAACATCTTTTGAAGGATGGGGAAACAACGCTTCTCTGCGGCGACACTGCCACTGCTCGTTCTGGGTTGGCTCACGGTATCCGTTACCGCTGGTGactCAACTCTGTCGGCTCCTGTCAATGTGACGATCAGGGAGCTGGAGGCGAACACAGCCATAGTCACATGGGAGATACTGGAGGGAGATCCTGTCATCGGATTTGCCGTCACACAACAgAAGAAGGATGTGCGCATGCTGCGGTACATCCAGGAAGTAAACACGACCACGCGCTCCTGTGCATTGTGGGACTTGGAGGAGGACACAGAGTACATTGTCCATGTCCAGAGCATCAGCATGGGAGGCAGCAGTCCTCCCAGTGACCCGGTCAGCTTCAGAACTCCCAGAGAGTCTGAGAAACTGGCCTCCACAGGCCCagacgAGGTGAACAGGGAGGAGATGGAACAGGCAGTGCAGCTCAGAGTTGGAGAGCTCATCATCATCGTAGTGGTGCTCGTCATGTGGGCAGgtgTGATCCTCCTGTTCTGTCGTCAGTATGACATCATCAAAGACAACGAGCCCAACAACAACAAGGACAAAGCCAAGACCTCGTCAGAGTGCAGTACGCCAGAACACCCACAGGGGGGGCTACTGCGCAGCAACGTCTGAAAACAGCCCCCACTGGCCACTCACCTATATGGCAATAACCTCCAATCCTATTCCTCAGGACAGGTGAGGCTACACAGCCAACCAGAACCGTCATACCTGAGGCTGCATCCTGATTCTTCATACTTCTCCTGAAGTGTGCGTGTCCTTGTATCTACAACATGACGATCACCACTACGATGATGATGAGCTCTCCAGCTCCGAGCTAAGACCCCTGACACCATCTCCTCCACAAATCAGCACCTCAGACTACAGCACAGCACCACACCAGGAACCCAGCCCAGCCAATCCCAGCAGCACAGCCCCGCACCAGGAACCCAGCCCAGCCAATCCCAGCAGCACAGCCCCGCACCAGGAACCCAGCCCAGCCAATCCCAGCAGCACAGCCCCGCACCAGGAACCCAGCCCAGCCAATCCCAGCAGCCCAGCAGCACAGCCCACGATGGACCACAATCACCTACCACCCAGAGTGGGGAGACTGAAGAGGTGTAGGGTGAAGCTGCCCCgagacgctgatcttgggtcagcgTCTAGGGTTGTGCCTTTCAGATTATAATACACAAGGTTAAATGGACACGGGAGGCCTGATCATAGATCAGCACTCCCACTCTGAGGTGCTTTATGAACAGAGAGGAATTGACAGGTTTGGTCAGAAAGTTCCAGCTAGACTATCAGAGGGCAAGGTAAAGTTATTATCATATTGCTTAAACCTATCAAATCATTTCAGATCGCAACAGATGTCTAGAGGGAAGGGGCTAAGTGATTGTTTCTGGACAAGGagcctctgtctccccctccctctctccagatcACTGTCTCTTacactctctatctccctccctcgccAGATCACTGTCTCTAcactctttatctccctctctccagatcCCGGTCTCTacact

Function

NR:

description
PREDICTED: fibronectin type III domain-containing protein 5-like isoform X1

GO: NA

KEGG:

id description
K24486 FNDC4_5; fibronectin type III domain-containing protein 4/5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953587.1 True 1945 mRNA 0.54 5 67407312 67441367

Neighbor

gene id symbol gene type direction distance location
srfbp1 LOC106589067 coding downstream 58328 67341388 ~ 67348984 (-)
LOC110496729 LOC106589066 coding downstream 70116 67325870 ~ 67337196 (-)
sox4a LOC106589061 coding downstream 294729 67105914 ~ 67112583 (-)
LOC118941008 NA coding downstream 348763 67058124 ~ 67058673 (-)
LOC118941007 NA coding downstream 536386 66857937 ~ 66870926 (-)
LOC118941009 NA coding upstream 102194 67543561 ~ 67558111 (-)
eif3i eif3i coding upstream 220758 67662125 ~ 67668116 (-)
txlna LOC106589073 coding upstream 228721 67670088 ~ 67684423 (-)
LOC118941210 NA coding upstream 257809 67699176 ~ 67702000 (-)
kpna6 LOC106589075 coding upstream 261174 67702388 ~ 67729353 (-)
G1576222 NA non-coding downstream 2505 67401448 ~ 67441976 (-)
G1576260 NA non-coding downstream 20702 67384143 ~ 67386610 (-)
G1576247 NA non-coding downstream 55534 67351147 ~ 67351778 (-)
G1576234 NA non-coding downstream 85119 67321788 ~ 67322193 (-)
G1576226 NA non-coding downstream 94183 67312193 ~ 67313129 (-)
G1576288 NA non-coding upstream 34092 67475459 ~ 67476466 (-)
G1576290 NA non-coding upstream 38630 67479997 ~ 67480440 (-)
G1576294 NA non-coding upstream 53964 67495331 ~ 67495687 (-)
G1576295 NA non-coding upstream 63311 67504678 ~ 67505026 (-)
G1576296 NA non-coding upstream 63711 67505078 ~ 67505295 (-)
G1575977 NA other downstream 203825 67203201 ~ 67203487 (-)
G1575774 NA other downstream 580435 66826582 ~ 66826877 (-)
LOC110496725 LOC106589055 other downstream 596846 66802870 ~ 66810492 (-)
G1576491 NA other upstream 473821 67915188 ~ 67955212 (-)
LOC118941211 NA other upstream 1180881 68622013 ~ 68626119 (-)
G1577745 NA other upstream 1307245 68748612 ~ 68787686 (-)
G1577996 LOC106589133 other upstream 1871519 69312886 ~ 69315998 (-)
G1578111 NA other upstream 2125817 69567184 ~ 69568164 (-)

Expression


Co-expression Network