Gene
RNA
| Item | Value |
|---|---|
| gene id | hdac1 |
| gene name | LOC106570688 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 67636353 ~ 67660955 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036953588.1 | False | 1865 | mRNA | 0.51 | 14 | 67636353 | 67658606 |
| XR_005037541.1 | False | 3153 | mRNA | 0.46 | 15 | 67636353 | 67660955 |
| TU1803292 | True | 671 | TUCP | 0.51 | 6 | 67636397 | 67643057 |
67,616,000
67,620,000
67,624,000
67,628,000
67,632,000
67,636,000
67,640,000
67,644,000
67,648,000
67,652,000
67,656,000
67,660,000
67,664,000
67,668,000
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| marcksl1b | NA | coding | upstream | 8738 | 67624729 ~ 67627615 (+) |
| ldlrap1a | LOC106589068 | coding | upstream | 249810 | 67366249 ~ 67386543 (+) |
| maco1a | LOC105030234 | coding | upstream | 273057 | 67349014 ~ 67363296 (+) |
| atat1 | atat1 | coding | upstream | 890939 | 66714149 ~ 66745414 (+) |
| LOC110496897 | gabbr1 | coding | upstream | 955510 | 66526361 ~ 66680843 (+) |
| LOC110496745 | NA | coding | downstream | 693473 | 68354385 ~ 68361147 (+) |
| LOC110496746 | LOC106589080 | coding | downstream | 702544 | 68363499 ~ 68366067 (+) |
| LOC118941010 | NA | coding | downstream | 720277 | 68381232 ~ 68388364 (+) |
| LOC118941011 | NA | coding | downstream | 776467 | 68437422 ~ 68490704 (+) |
| LOC110496750 | LOC105006285 | coding | downstream | 1126365 | 68787320 ~ 68888940 (+) |
| G1576152 | NA | non-coding | upstream | 59613 | 67576133 ~ 67576740 (+) |
| G1576147 | NA | non-coding | upstream | 70675 | 67561895 ~ 67565678 (+) |
| G1576132 | NA | non-coding | upstream | 106027 | 67529987 ~ 67530326 (+) |
| G1576122 | NA | non-coding | upstream | 125773 | 67510305 ~ 67510580 (+) |
| G1576118 | NA | non-coding | upstream | 140640 | 67495416 ~ 67495713 (+) |
| G1576054 | LOC106589073 | non-coding | downstream | 7563 | 67668518 ~ 67671950 (+) |
| G1576183 | NA | non-coding | downstream | 24758 | 67685713 ~ 67686087 (+) |
| G1576184 | NA | non-coding | downstream | 28138 | 67689093 ~ 67689328 (+) |
| G1576055 | NA | non-coding | downstream | 29064 | 67690019 ~ 67692024 (+) |
| G1576056 | NA | non-coding | downstream | 32712 | 67693667 ~ 67698780 (+) |
| G1576081 | NA | other | upstream | 295918 | 67339520 ~ 67340435 (+) |
| G1574811 | NA | other | upstream | 669089 | 66964838 ~ 66967264 (+) |
| G1574812 | NA | other | upstream | 671986 | 66960342 ~ 66964367 (+) |
| G1574810 | NA | other | upstream | 673315 | 66958164 ~ 66963038 (+) |
| G1574728 | NA | other | upstream | 833897 | 66799417 ~ 66802456 (+) |
| G1576816 | NA | other | downstream | 817118 | 68478073 ~ 68478668 (+) |
| G1577314 | NA | other | downstream | 1107432 | 68768387 ~ 68776262 (+) |
| mfsd2ab | LOC106570727 | other | downstream | 1466935 | 69078422 ~ 69130056 (+) |
| si:ch211-215i13.3 | LOC106589127 | other | downstream | 1699693 | 69360411 ~ 69374917 (+) |
| G1577567 | NA | other | downstream | 1954324 | 69615279 ~ 69616967 (+) |
