LOC118941210


Basic Information

Item Value
gene id LOC118941210
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 67699176 ~ 67702000 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037542.1
gggggcgggagagaggcagggtgggagaggaggaagagaggaggctgggGAGTGCCGTAATTTAGGTCTTTAGAAAATCTAACAATATATAAGAATTTCATGTCCCATTGAGAAGAGAAAGTACAGGGGGCAGAGTTTATCACATATTAGATGGTATAGTTGAGGGGGCAGAGTTTATCACATATTAGATGGTATTGCTCAGGGGGCAGAGTTTATCACATATTAGATGGTATTTTTCAGGGGGCAGTTATCACATATTAGTGGCGGTGAGGTAATACCATCTATCATCTGGTTGACGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATATCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTAGGCGGTGAGGTAATACCATCTATCATCTAGTAGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGACGGTGAGGTAATACCATCTATCATCTAGTAGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTAGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCATCTATCATCTAGTTGGCGGTGAGGTAATAAATGGTATTATCTAGTTGGTGGTGAGGTAATAGTGTGgttattgagtgtaaggttaCATCTGATATCAGTTGTTGTTTTTGCGTTCTACTGTTGAATCCTCCAACCAGGCTTTCTGTAAAACGGGAATTTGAGGTAAGTTACTGCAACTCTGCCGTGTTTAAAAGAAATGGGAATGAGAACTTGTAATGTTCCATGGGTCATTGTGATGGGGATAAGTACTAGGTATCGTTGTGATGGGGATAAGTACTAGGTATCATTGTGATGGGGATAAGTACTAGGTATTGGTGTGATGGGGATAAGTACTAGGTATCGTTGTGATGGGGATAAGTACTAGGTATCATTGTGATGGGGATAAATACTAGTTATCATTGTGATGGGGATAAGTACTAGGTATCGTTGTGATGGGGATAAGTACTAGGTATCATTGTGATGGGGATAAGTACTAGGAATCATTGTGATGGGGGATATGTACTAGGTATCATTGTGATGGGGATATGTACTAGGTATCATTGTGATGTGGATAAGTACTAGGAATCGTTGTGATGGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGGATAAGTACTAGGTATCGTTGTGATGGGGATAAGTACTAGGTATCATGATGATGGGGATAAGTACTAGGTATCATTGGTATAGTAATATGTACTAGGTATCATGATGATGGGGATAAATACTAGGTATTGATGTGTATTATTCTAGAGAGTCTCTGGTCAGAGGTAGAGGCCACTCGTTTTGACACCTAGAGTGTCTCTGTGGTCAGAGGTAGAGGCCACTCGTTTTGACACCTAGAGAGTCTCTGGTCAGGTAGAGGCCACTCGTTTTGACAGGAGCCACGTAGAGAACCTCTATCTCGGACAGCGTGTCATTGGAAATGAGAACGTAGATCTAACGACAACCGGGGTTTGGCAAGGGATACGTCTATTCATTTAGACCGTGACGAACCTAACCGCGGAAATTCTAGTAAAGAGATGTATTTGCACACACACTTCATGCATACATACACCAGAAGACAGTACACTGTACACACGGACGAGTGTTACACAACAAGGGAAAACAACTTCCATAAtccagtttatttttatttatttttttgaatgaaCATGGGTTTTCCTTCTGTGTTCTATTTCTACAAGGTTTTGGTTTTCTGATGCACTATGTTCATTCAGTATTTTTTAAATTTGCGTCGTTTTGCCACTTCCTGTTAGGTACTTTTTGAAGTTATGCACTTTGAAAAAAACACGTTTTAAATTCAATAACCCACAGTGCATTGCTCCTATTGAAACGATTAGATGAATACTGGAGGTGGAAGGTATGACACAAAGGATTATTAAAGTGAAACAATCAAATTCACAGCATCATTTCAtacctctctcttt
>TU1803698
gaggaggctgggGAGTGCCGTAATTTAGGTCTTTAGAAAATCTAACAATATATAAGAATTTCATGTCCCATTGAGAAGAGAAAGTACAGGGGGCAGAGTTTATCACATATTAGATGGTATAGTTGAGGGGGCAGAGTTTATCACATATTAGATGGTATTGCTCAGGGGGCAGAGTTTATCACATATTAGATGGTATTTTTCAGGGGGCAGTTATCACATATTAGTGGCGGTGAGGTAATACCATCTATCATCTGGTTGACGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATATCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCTATCATCTAGTTGGCGGTGAGGTAATACCATCATCTATCATCTAGTTGGCGGTGAGGTAATAAATGGTATTATCTAGTTGGTGGTGAGGTAATAGTGTGgttattgagtgtaaggttaCATCTGATATCAGTTGTTGTTTTTGCGTTCTACTGTTGAATCCTCCAACCAGGCTTTCTGTAAAACGGGAATTTGAGGTAAGTTACTGCAACTCTGCCGTGTTTAAAAGAAATGGGAATGAGAACTTGTAATGTTCCATGGGTCATTGTGATGGGGATAAGTACTAGGTATCGTTGTGATGGGGATAAGTACTAGGTATCATTGTGATGGGGATAAGTACTAGGTATTGGTGTGATGGGGATAAGTACTAGGTATCGTTGTGATGGGGATAAGTACTAGGTATCATTGTGATGGGGATAAATACTAGTTATCATTGTGATGGGGATAAGTACTAGGTATCGTTGTGATGGGGATAAGTACTAGGTATCATTGTGATGGGGATAAGTACTAGGTATTGGTGTGATGGGGATAAGTACTAGGTATCGTTGTGATGGGGATAAGTACTAGGTATCATTTTGATGGGGATAAGTACTAGGTATTGTTGTGATGGGGATACGTACTAGGAATCGTTGTGATGGGGATATGTACTAGGTATCATTGTGATGGGGATATGTACTAGGTATCATTGTGATGGGGATATGTACTAGGAATCATTGATGGGGATAAGTACTAGGAATCATTGTGATGGCGGATATGTACTAGGAATCATTGTGATGGGGGATATGTACTAGGAATCATTGTGATGGGGGATATGTACTAGGTATCATTGTGATGGGGATATGTACTAGGTATCATTGTGATGTGGATAAGTACTAGGAATCGTTGTGATGGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGATAAGTACTAGGTATCGTTGTGATGGGGATAAGTACTAGGTATCGTTGTGATGGGGATAAGTACTAGGTATCATGATGATGGGGATAAGTACTAGGTATCATTGGTATAGTAATATGTACTAGGTATCATGATGATGGGGATAAATACTAGGTATTGATGTGTATTATTCTAGAGAGTCTCTGGTCAGAGGTAGAGGCCACTCGTTTTGACACCTAGAGTGTCTCTGTGGTCAGAGGTAGAGGCCACTCGTTTTGACACCTAGAGAGTCTCTGGTCAGGTAGAGGCCACTCGTTTTGACAGGAGCCACGTAGAGAACCTCTATCTCGGACAGCGTGTCATTGGAAATGAGAACGTAGATCTAACGACAACCGGGGTTTGGCAAGGGATACGTCTATTCATTTAGACCGTGACGAACCTAACCGCGGAAATTCTAGTAAAGAGATGTATTTGCACACACACTTCATGCATACATACACCAGAAGACAGTACACTGTACACACGGACGAGTGTTACACAACAAGGGAAAACAACTTCCATAAtccagtttatttt

Function

NR:

description
PREDICTED: cuticle protein 38-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037542.1 False 2545 mRNA 0.41 2 67699176 67702000
TU1803698 True 2075 lncRNA 0.41 2 67699473 67701963

Neighbor

gene id symbol gene type direction distance location
txlna LOC106589073 coding downstream 14753 67670088 ~ 67684423 (-)
eif3i eif3i coding downstream 31060 67662125 ~ 67668116 (-)
LOC118941009 NA coding downstream 141065 67543561 ~ 67558111 (-)
fndc5b LOC106589070 coding downstream 257809 67407312 ~ 67441367 (-)
srfbp1 LOC106589067 coding downstream 350192 67341388 ~ 67348984 (-)
kpna6 LOC106589075 coding upstream 541 67702388 ~ 67729353 (-)
trnay-gua-8 NA coding upstream 106506 67808506 ~ 67808593 (-)
trnay-gua-9 NA coding upstream 107979 67809979 ~ 67810066 (-)
trnay-gua-10 NA coding upstream 109452 67811452 ~ 67811539 (-)
trnay-gua-11 NA coding upstream 110925 67812925 ~ 67813012 (-)
G1576359 NA non-coding downstream 71 67690039 ~ 67699105 (-)
G1576334 NA non-coding downstream 16855 67590191 ~ 67682321 (-)
G1576309 NA non-coding downstream 71570 67531804 ~ 67627606 (-)
G1576324 NA non-coding downstream 135455 67562905 ~ 67563721 (-)
G1576308 NA non-coding downstream 168255 67530532 ~ 67530921 (-)
G1576367 NA non-coding upstream 3255 67705255 ~ 67705540 (-)
G1576374 NA non-coding upstream 30647 67732647 ~ 67732872 (-)
G1576375 NA non-coding upstream 30949 67732949 ~ 67733306 (-)
G1576383 NA non-coding upstream 40459 67742459 ~ 67742822 (-)
G1576222 NA other downstream 257200 67401448 ~ 67441976 (-)
G1575977 NA other downstream 495689 67203201 ~ 67203487 (-)
LOC118941008 NA other downstream 640503 67058124 ~ 67058673 (-)
LOC118941007 NA other downstream 828977 66857937 ~ 66870926 (-)
G1575774 NA other downstream 872299 66826582 ~ 66826877 (-)
G1576491 NA other upstream 213188 67915188 ~ 67955212 (-)
LOC118941211 NA other upstream 920248 68622013 ~ 68626119 (-)
G1577745 NA other upstream 1046612 68748612 ~ 68787686 (-)
G1577996 LOC106589133 other upstream 1610886 69312886 ~ 69315998 (-)
G1578111 NA other upstream 1865184 69567184 ~ 69568164 (-)

Expression


Co-expression Network