XLOC_034345


Basic Information

Item Value
gene id XLOC_034345
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 1167847 ~ 1168164 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068648
CTGAGGATGATGTGAATGTTGAGCTGATGATGGCCGCTTTGTTGGAGGAGATTGAGCAGAATCTCGGAGAGTCGATGAAGAGCGCCAATGTGAAGCTGACATGGAGAAAACAGGCCAATGGGAAAGTCTTCCAGACAAATTAAAGAGCATTACTAATTTATACGATTATTAGAACTAACAGATTACCTGACAGAAACCTTCTCCTTAATGCCACATCACCGTCTCACTATACTCAAGACTCTAATCCTGCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068648 True 251 lncRNA 0.43 2 1167847 1168164

Neighbor

gene id symbol gene type direction distance location
XLOC_034344 CT030017.2 coding downstream 4018 1157610 ~ 1163829 (-)
XLOC_034343 NA coding downstream 14875 1151210 ~ 1152972 (-)
XLOC_034342 si:dkey-31g16.2 coding downstream 19308 1139805 ~ 1148539 (-)
XLOC_034341 NA coding downstream 31261 1112303 ~ 1136586 (-)
XLOC_034340 dctn1a coding downstream 58912 1062972 ~ 1108935 (-)
XLOC_034346 CT030017.1 coding upstream 34957 1203121 ~ 1203239 (-)
XLOC_034347 NA coding upstream 126648 1294812 ~ 1305257 (-)
XLOC_034348 NA coding upstream 138768 1306932 ~ 1321758 (-)
XLOC_034349 ripk3 coding upstream 162337 1330501 ~ 1348640 (-)
XLOC_034350 NA coding upstream 287530 1455694 ~ 1455971 (-)
XLOC_034339 NA non-coding downstream 106608 1055674 ~ 1061239 (-)
XLOC_034338 NA non-coding downstream 176233 990491 ~ 991614 (-)
XLOC_034337 NA non-coding downstream 182090 984904 ~ 985757 (-)
XLOC_034352 NA non-coding upstream 357443 1525607 ~ 1529252 (-)
XLOC_034336 NA non-coding downstream 131058 914720 ~ 1036789 (-)

Expression


Co-expression Network