trnay-gua-60


Basic Information

Item Value
gene id trnay-gua-60
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 67892589 ~ 67892676 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnay-gua-60
ccttcgatagctcagttggtagagcggaggactgtagatccttaggtcgctggttcaattCTGGCTCGAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnay-gua-60 True 73 mRNA 0.52 2 67892589 67892676

Neighbor

gene id symbol gene type direction distance location
trnay-gua-59 NA coding downstream 1385 67891117 ~ 67891204 (-)
trnay-gua-58 NA coding downstream 2859 67889643 ~ 67889730 (-)
trnay-gua-57 NA coding downstream 4333 67888169 ~ 67888256 (-)
trnay-gua-56 NA coding downstream 5806 67886696 ~ 67886783 (-)
trnay-gua-55 NA coding downstream 7261 67885241 ~ 67885328 (-)
trnay-gua-61 NA coding upstream 1384 67894060 ~ 67894147 (-)
khdrbs1b LOC106589082 coding upstream 382763 68275439 ~ 68295886 (-)
LOC110496744 LOC106589083 coding upstream 439572 68332248 ~ 68355140 (-)
LOC110496749 hpca coding upstream 507308 68399984 ~ 68469327 (-)
nt5c1aa LOC106589086 coding upstream 649623 68542299 ~ 68602274 (-)
G1576444 NA non-coding downstream 12735 67879620 ~ 67879854 (-)
G1576442 NA non-coding downstream 30902 67861473 ~ 67861687 (-)
G1576441 NA non-coding downstream 31567 67860394 ~ 67861022 (-)
G1576428 NA non-coding downstream 85080 67807223 ~ 67807509 (-)
G1576427 NA non-coding downstream 86958 67802327 ~ 67805631 (-)
G1576482 NA non-coding upstream 3307 67895983 ~ 67896622 (-)
G1576493 NA non-coding upstream 23781 67916457 ~ 67916842 (-)
G1576511 NA non-coding upstream 46122 67938798 ~ 67939635 (-)
G1576527 NA non-coding upstream 66974 67959650 ~ 67959922 (-)
G1576540 NA non-coding upstream 74920 67967596 ~ 67967822 (-)
G1576222 NA other downstream 450613 67401448 ~ 67441976 (-)
G1575977 NA other downstream 689102 67203201 ~ 67203487 (-)
LOC118941008 NA other downstream 833916 67058124 ~ 67058673 (-)
LOC118941007 NA other downstream 1022390 66857937 ~ 66870926 (-)
G1575774 NA other downstream 1065712 66826582 ~ 66826877 (-)
G1576491 NA other upstream 22512 67915188 ~ 67955212 (-)
LOC118941211 NA other upstream 729572 68622013 ~ 68626119 (-)
G1577745 NA other upstream 855936 68748612 ~ 68787686 (-)
G1577996 LOC106589133 other upstream 1420210 69312886 ~ 69315998 (-)
G1578111 NA other upstream 1674508 69567184 ~ 69568164 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) trnay-gua_48 NA coding NC_053127.1 CM020924.1 3652273 ~ 3652361 (+)
tiger barb (Puntius tetrazona) trnae-uuc_31 NA non-coding NC_056702.1 CM032071.1 26997589 ~ 26997660 (+)