nt5c1aa (LOC106589086)


Basic Information

Item Value
gene id nt5c1aa
gene name LOC106589086
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 68542299 ~ 68602274 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953600.1
gagagagagagagagagggagagagcgagggagcgagagagagagagagagcgagagagggagagcagagagagtgatTGAATGGGACAGATTGTGAGGTGTGAGAAAAAGCGAGtgagtgaggcagagagagagagagagagagaggatcagagacagagaggaacagaggacaacaacacagcaacagTGGAGGGAGAGCAGGCTTAGCAGCATAGAAAAAACACCAATAAAAACACTATTCAACGCTACATTGGATTGGATCCACACTGGAcaacctatgtgtgtgtgtgtgtgtgtgagtcagcctggttgtgacagtgtgtgagagtgtctgtgtgtgtgtgaatgtgtgtgtgagaaacagagagcagttgtgtgtatgagagaggtAATCCGAAAGAACATGCGTGTGAGAGACaacctgtgactgtgtgtgaggaaggggtttgttgtgtgtgtgtgtgtgtgtgtgtgttgtagactgTACCGGACTATGAGTTGTGCAATGCAATGCAGTATTACTTCTGAAGAGAGGAGACACTGAAGAGCGAACACTGCAGGGATACTTGTGCAGCTGCTCTTGTGTCAGACACACCACTGTAGCGGACAGCGTTAGAGCCCACGGCTGGAGAGGACAGGACCTCTTGCTTGGATAATACCGATGAATCTGGACCCTGTTCAGGTGATGAAGGGGCAGTCTAACCCAAAGGACCCCACGGCTGCCCCTGTAACTGCCTCGTCAAATGGAGATGGCAAAGGAGCctgggaagagaaagaggagtttGACCAAGACCACCTGGGTCTCACCACAAAACCCCTACTGGTGTCATGTCAGAGAAGAGCCCGGAAGGTGGAGGGAGGCATTTTCTTTCCCAAGCCTGAGAATGCCGTGACCATTGCGGTGTCGTCCCGGGTCCTGTTCCGTACTGAGACGGAGCAGAAGGTGTATGAGCAGAAGGGGGTAGAGGAGTACCTAAGGTATCAGGTGGAGCACGAGAACGAACCCTTCGCCCCAGGACCAGCCTTCTCCTTCGTCAAGGCGTTGGAGGCGGTGAATGCCCGTCTGAGAGAACTGTACCCAGAGAGTGAAGAACTGTTTGACATCGTCCTGGTAACCTATAACCACGCCCATGTAGGAGTCAGACTCATCAATACCATCAACCATCACAatCTGTTCATTGAGAGGTTCTGTATGACGGGAGGCAGTTCACCTATTGGCTACCTAAAGGCGTGGCAGACCAACCTGTACCTGTCTGCCGATGCGGAGAAGGTCAGGGAGGCGCTGTCTGAAGGCATTGCTGCGGCCACCATGTTCATGTCCAATAAGCTGACAGAGGTATCGCAGACGCAGCTGAGAGTGGCCTTTGACGGGGACGCTGTCCTCTTCTCTGACGAATCAGAACGCATCTTCAAGGCCCAGGGCCTCGACGGGTTCTTCCAGCACGAGAGAGACAACGAGGACATTCTACTGGACCGTGGCCCTCTTAAGGACTTCCTAGCGTCCCTTGGTAAACTCCAGAAGAAGTTCTATGCTAAGGGTCACCGTCTGGACTGTCCCATTCGTACCTACCTGGTGACGGCCCGCAGCGCAGCCAGCTCAGGGATCCGTGCCCTGAAGACCTTGAGAGCCTGGGGCCTGGAGACGGACGAGGCTCTGTTCCTGGCCGGGGCACCCAAGGGCCCGATGCTGGAGAAGATTAGGCCCCACATCTACTTCGATGACCAGATGTTCCATGTGGAAGGGGCGGCGGAGATGGGCACGGTCGCGGCTCACGTACCCTACGGGATCGCTCAGAAGCACCCACATAAGAAGAGCCTGAACACAGGGAAGTAGATAGCGGAAGGAGAGAATAAGTAAAAGATTGAAGAAactaagagagaagaagagacctGAGATTAAATACttttagagagggagatatagagtcATATGGAACATCTGATCTTCCCCAGGTCATTGTCACAAACAAGAAAAGGGTTATTTTCAGTCAGTAAGCTTCGTAAAAACTAAGGTAGATCAATTAAAAATGAAGACAATGAAGAAAGTCTGTAAAGTTTTGGTATTGAAATACTCCTAATAGACAATAATTTTATATGTGTTGATTACAGTATGTGCTTTTCACCAGATTTCAGAAGTGTTTGTGTTGTACATAAGTGGGGTTGTTTCACCTCCTCAGCATCCTGTGTGTGCAGCCGTTATAATCATCCTTAGGAATGTGTTATCATAAGCACTTTGGTTGGCCACGGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATACAGAACCAGAGGAGAGTTCTACATACCTGATACAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATACAGGAACAGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTACATACCTGATATAGAACCAGAGGAGAGTTCTAAATACCTGATATAGAACCAGAGGAGAGTTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCCGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGCTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTACATACCTGATATAGAACCAGATGAGAGTTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATATAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGCCTGTCAACAACAAGCTTTACTTTCCCATATGACTTGAGCAAATGCATTCACTTGAACTGAActtgttttattttcttcaacATTTGTGGGATGTAACATGCATCCTGTGCTATTTTTAATGGCCGATCCATGGCTGTGGTTGTAGCGAAGGGAAAAGGCTACAGGTGCTCCAGAACTCTCCACAGTCCGTcctaagaagaagaagaagacagaggTGAACTCTTGATAGTAACCAGGATGATATTTTACAAGATGACGAATGGCATCTGGACTGCCTTAAAGGACCCTGGTGTCTGTGCTTCAAAACACATGGATGAGACTGACCGACTGAAAGACGTGGGAACACCTCAAAAGTGTTCCGGAATTGGGAATCGATTCTATTATTTATAGAATCAAAAAAGCCATGATCCAGAAGCACAGAGGAATGGGGTGAAATAACTATATTTGACAGTTGCACGACAAGACATACCTATTAATGAACATATGTAGCACACATGGAAACAGTTACGCGATGTAATGTATTATTTAATAGACCTTATTTGTTCGTGTCGAATTGTCTCActgtgaaaaaaaaaaagtaattaactTCAAGAATGAAGAGGTCACTTGCATGCTAGTCATCTTCCCCGAAGATAACAAATAACACAATTGTATTATCTCACAAACGTCTTCTCCAAGTAACAAAGCCATAAATACCAaccataatgtttttttttttaatctctgAGTTTCCATTGGTGCCTTGGTTCTAACACATGTAAATGGTGTATCACCTGTCTGTTCTGAGGGAACACTAGACGATCAATAAAGTTTTTACGAATTCAA
>XM_036953601.1
gagagagagagagagagggagagagcgagggagcgagagagagagagagagcgagagagggagagcagagagagtgatTGAATGGGACAGATTGTGAGGTGTGAGAAAAAGCGAGtgagtgaggcagagagagagagagagagagaggatcagagacagagaggaacagaggacaacaacacagcaacagTGGAGGGAGAGCAGGCTTAGCAGCATAGAAAAAACACCAATAAAAACACTATTCAACGCTACATTGGATTGGATCCACACTGGAcaacctatgtgtgtgtgtgtgtgtgtgagtcagcctggttgtgacagtgtgtgagagtgtctgtgtgtgtgtgaatgtgtgtgtgagaaacagagagcagttgtgtgtatgagagaggtAATCCGAAAGAACATGCGTGTGAGAGACaacctgtgactgtgtgtgaggaaggggtttgttgtgtgtgtgtgtgtgtgtgtgtgttgtagactgTACCGGACTATGAGTTGTGCAATGCAATGCAGTATTACTTCTGAAGAGAGGAGACACTGAAGAGCGAACACTGCAGGGATACTTGTGCAGCTGCTCTTGTGTCAGACACACCACTGTAGCGGACAGCGTTAGAGCCCACGGCTGGAGAGGACAGGACCTCTTGCTTGGATAATACCGTAGGGATTGTACCATTTTGGGAAGATCACAGAGGTGGCATAGACAATACTATACAGGTAGATTGTACCACTGGGACGACGGGGTGATTGTGTGTTTTCAGGATGAATCTGGACCCTGTTCAGGTGATGAAGGGGCAGTCTAACCCAAAGGACCCCACGGCTGCCCCTGTAACTGCCTCGTCAAATGGAGATGGCAAAGGAGCctgggaagagaaagaggagtttGACCAAGACCACCTGGGTCTCACCACAAAACCCCTACTGCCCAAGCCTGAGAATGCCGTGACCATTGCGGTGTCGTCCCGGGTCCTGTTCCGTACTGAGACGGAGCAGAAGGTGTATGAGCAGAAGGGGGTAGAGGAGTACCTAAGGTATCAGGTGGAGCACGAGAACGAACCCTTCGCCCCAGGACCAGCCTTCTCCTTCGTCAAGGCGTTGGAGGCGGTGAATGCCCGTCTGAGAGAACTGTACCCAGAGAGTGAAGAACTGTTTGACATCGTCCTGGTAACCTATAACCACGCCCATGTAGGAGTCAGACTCATCAATACCATCAACCATCACAatCTGTTCATTGAGAGGTTCTGTATGACGGGAGGCAGTTCACCTATTGGCTACCTAAAGGCGTGGCAGACCAACCTGTACCTGTCTGCCGATGCGGAGAAGGTCAGGGAGGCGCTGTCTGAAGGCATTGCTGCGGCCACCATGTTCATGTCCAATAAGCTGACAGAGGTATCGCAGACGCAGCTGAGAGTGGCCTTTGACGGGGACGCTGTCCTCTTCTCTGACGAATCAGAACGCATCTTCAAGGCCCAGGGCCTCGACGGGTTCTTCCAGCACGAGAGAGACAACGAGGACATTCTACTGGACCGTGGCCCTCTTAAGGACTTCCTAGCGTCCCTTGGTAAACTCCAGAAGAAGTTCTATGCTAAGGGTCACCGTCTGGACTGTCCCATTCGTACCTACCTGGTGACGGCCCGCAGCGCAGCCAGCTCAGGGATCCGTGCCCTGAAGACCTTGAGAGCCTGGGGCCTGGAGACGGACGAGGCTCTGTTCCTGGCCGGGGCACCCAAGGGCCCGATGCTGGAGAAGATTAGGCCCCACATCTACTTCGATGACCAGATGTTCCATGTGGAAGGGGCGGCGGAGATGGGCACGGTCGCGGCTCACGTACCCTACGGGATCGCTCAGAAGCACCCACATAAGAAGAGCCTGAACACAGGGAAGTAGATAGCGGAAGGAGAGAATAAGTAAAAGATTGAAGAAactaagagagaagaagagacctGAGATTAAATACttttagagagggagatatagagtcATATGGAACATCTGATCTTCCCCAGGTCATTGTCACAAACAAGAAAAGGGTTATTTTCAGTCAGTAAGCTTCGTAAAAACTAAGGTAGATCAATTAAAAATGAAGACAATGAAGAAAGTCTGTAAAGTTTTGGTATTGAAATACTCCTAATAGACAATAATTTTATATGTGTTGATTACAGTATGTGCTTTTCACCAGATTTCAGAAGTGTTTGTGTTGTACATAAGTGGGGTTGTTTCACCTCCTCAGCATCCTGTGTGTGCAGCCGTTATAATCATCCTTAGGAATGTGTTATCATAAGCACTTTGGTTGGCCACGGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATACAGAACCAGAGGAGAGTTCTACATACCTGATACAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATACAGGAACAGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTACATACCTGATATAGAACCAGAGGAGAGTTCTAAATACCTGATATAGAACCAGAGGAGAGTTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCCGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGCTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTACATACCTGATATAGAACCAGATGAGAGTTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATATAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGAACCAGAGGAGAGTTCTACATACCTGATATAGCCTGTCAACAACAAGCTTTACTTTCCCATATGACTTGAGCAAATGCATTCACTTGAACTGAActtgttttattttcttcaacATTTGTGGGATGTAACATGCATCCTGTGCTATTTTTAATGGCCGATCCATGGCTGTGGTTGTAGCGAAGGGAAAAGGCTACAGGTGCTCCAGAACTCTCCACAGTCCGTcctaagaagaagaagaagacagaggTGAACTCTTGATAGTAACCAGGATGATATTTTACAAGATGACGAATGGCATCTGGACTGCCTTAAAGGACCCTGGTGTCTGTGCTTCAAAACACATGGATGAGACTGACCGACTGAAAGACGTGGGAACACCTCAAAAGTGTTCCGGAATTGGGAATCGATTCTATTATTTATAGAATCAAAAAAGCCATGATCCAGAAGCACAGAGGAATGGGGTGAAATAACTATATTTGACAGTTGCACGACAAGACATACCTATTAATGAACATATGTAGCACACATGGAAACAGTTACGCGATGTAATGTATTATTTAATAGACCTTATTTGTTCGTGTCGAATTGTCTCActgtgaaaaaaaaaaagtaattaactTCAAGAATGAAGAGGTCACTTGCATGCTAGTCATCTTCCCCGAAGATAACAAATAACACAATTGTATTATCTCACAAACGTCTTCTCCAAGTAACAAAGCCATAAATACCAaccataatgtttttttttttaatctctgAGTTTCCATTGGTGCCTTGGTTCTAACACATGTAAATGGTGTATCACCTGTCTGTTCTGAGGGAACACTAGACGATCAATAAAGTTTTTACGAATTCAA

Function

NR:

description
cytosolic 5'-nucleotidase 1A-like isoform X1

GO: NA

KEGG:

id description
K01081 E3.1.3.5; 5'-nucleotidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953600.1 False 3857 mRNA 0.46 8 68542299 68602274
XM_036953601.1 True 3910 mRNA 0.46 6 68542299 68602274

Neighbor

gene id symbol gene type direction distance location
LOC110496749 hpca coding downstream 72972 68399984 ~ 68469327 (-)
LOC110496744 LOC106589083 coding downstream 187159 68332248 ~ 68355140 (-)
khdrbs1b LOC106589082 coding downstream 246413 68275439 ~ 68295886 (-)
trnay-gua-61 NA coding downstream 648152 67894060 ~ 67894147 (-)
trnay-gua-60 NA coding downstream 649623 67892589 ~ 67892676 (-)
LOC118941211 NA coding upstream 19739 68622013 ~ 68626119 (-)
hpcal4 LOC106570705 coding upstream 24602 68626876 ~ 68699108 (-)
trit1 LOC106594867 coding upstream 336331 68938605 ~ 68996503 (-)
myclb LOC106593562 coding upstream 394995 68997269 ~ 69010704 (-)
spag1a LOC106589120 coding upstream 635769 69238043 ~ 69262807 (-)
G1577216 NA non-coding downstream 915 68541083 ~ 68541384 (-)
G1577128 NA non-coding downstream 4462 68537502 ~ 68537837 (-)
G1577123 NA non-coding downstream 6094 68535998 ~ 68536205 (-)
G1577104 NA non-coding downstream 32729 68509359 ~ 68509570 (-)
G1577101 NA non-coding downstream 36525 68505560 ~ 68505774 (-)
G1577241 NA non-coding upstream 2116 68604390 ~ 68604639 (-)
G1577242 NA non-coding upstream 6039 68608313 ~ 68608569 (-)
G1577243 NA non-coding upstream 6653 68608927 ~ 68609266 (-)
G1577245 NA non-coding upstream 10595 68612869 ~ 68613180 (-)
G1577265 NA non-coding upstream 61158 68663432 ~ 68666147 (-)
G1576491 NA other downstream 587087 67915188 ~ 67955212 (-)
G1576222 NA other downstream 1100323 67401448 ~ 67441976 (-)
G1575977 NA other downstream 1338812 67203201 ~ 67203487 (-)
LOC118941008 NA other downstream 1483626 67058124 ~ 67058673 (-)
LOC118941007 NA other downstream 1672100 66857937 ~ 66870926 (-)
G1577745 NA other upstream 146338 68748612 ~ 68787686 (-)
G1577996 LOC106589133 other upstream 710612 69312886 ~ 69315998 (-)
G1578111 NA other upstream 964910 69567184 ~ 69568164 (-)
G1578132 NA other upstream 1001986 69604260 ~ 69606902 (-)

Expression


Co-expression Network