XLOC_034347



Basic Information


Item Value
gene id XLOC_034347
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 1294812 ~ 1305257 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00068649
tatatttacttttacaATTTACTTGTCTTTAAGTCGATAATCTTGTAGGCCTGATATGGAACACCTGACCTGAGGTAACAACAAATCACTGATGAGGATTTAAACTCGACGGAAATCAgccgtttctgactctgctttgccttctgcctgcccacgacccaagcctgatacacggactctgatactcgctgcctgccctcgacccaaggtgtttcacggactctgaatcacgccgcctgcctctgacccatgcctgccgcctgccttgtacctcAGCCTGATTACCGACTCTGATCCTAGCCGCCttccttgaactctagcctggaCACCGACCTTGATattcgccgcctgcctctgacccatgcctgaacATTCATACTGTGATTACCTGCCGTTGATCCTTCAACGTAACACtattgtgtttgatgtgagttcgcacacgcattacatctgtgtgcttgtgtgtaattaactgtgtttaataaatttactgc

Function


GO:

id name namespace
GO:0031224 intrinsic component of membrane cellular_component
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00068649 True 494 lncRNA 0.48 3 1294812 1305257

Neighbor


gene id symbol gene type direction distance location
XLOC_034346 CT030017.1 coding downstream 91573 1203121 ~ 1203239 (-)
XLOC_034345 NA coding downstream 126648 1167847 ~ 1168164 (-)
XLOC_034344 CT030017.2 coding downstream 130983 1157610 ~ 1163829 (-)
XLOC_034343 NA coding downstream 141840 1151210 ~ 1152972 (-)
XLOC_034342 si:dkey-31g16.2 coding downstream 146273 1139805 ~ 1148539 (-)
XLOC_034348 NA coding upstream 1675 1306932 ~ 1321758 (-)
XLOC_034349 ripk3 coding upstream 25244 1330501 ~ 1348640 (-)
XLOC_034350 NA coding upstream 150437 1455694 ~ 1455971 (-)
XLOC_034351 si:zfos-405g10.4 coding upstream 193225 1498482 ~ 1504382 (-)
XLOC_034352 NA coding upstream 220350 1525607 ~ 1529252 (-)
XLOC_034341 NA non-coding downstream 158226 1112303 ~ 1136586 (-)
XLOC_034339 NA non-coding downstream 233573 1055674 ~ 1061239 (-)
XLOC_034353 NA non-coding upstream 241671 1546928 ~ 1547239 (-)
XLOC_034354 NA non-coding upstream 270019 1575276 ~ 1575693 (-)

Expression



Co-expression Network