Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941216 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 70760086 ~ 70763674 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036953645.1 | False | 3529 | mRNA | 0.45 | 2 | 70760086 | 70763674 |
| XM_036953646.1 | False | 3326 | mRNA | 0.44 | 2 | 70760086 | 70763674 |
| TU1806931 | True | 656 | lncRNA | 0.44 | 1 | 70762521 | 70763176 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515400 | tmem64 | coding | upstream | 5655 | 70723470 ~ 70757121 (+) |
| LOC110504292 | LOC106570754 | coding | upstream | 210093 | 70499475 ~ 70549993 (+) |
| LOC110519153 | runx1t1 | coding | upstream | 374501 | 70192261 ~ 70385585 (+) |
| LOC118941012 | NA | coding | upstream | 796815 | 69959060 ~ 69963271 (+) |
| LOC110496767 | LOC106589121 | coding | upstream | 1134697 | 69622962 ~ 69625389 (+) |
| acot13 | acot13 | coding | downstream | 10920 | 70774594 ~ 70777352 (+) |
| LOC110515436 | LOC106570762 | coding | downstream | 93549 | 70857223 ~ 70952795 (+) |
| LOC118941014 | NA | coding | downstream | 294693 | 71058367 ~ 71059155 (+) |
| LOC118940973 | NA | coding | downstream | 444743 | 71208388 ~ 71209643 (+) |
| LOC118941017 | NA | coding | downstream | 1180568 | 71944242 ~ 71946176 (+) |
| G1578904 | NA | non-coding | upstream | 14532 | 70744929 ~ 70745554 (+) |
| G1578884 | NA | non-coding | upstream | 39038 | 70720776 ~ 70721048 (+) |
| G1578707 | NA | non-coding | upstream | 156338 | 70603431 ~ 70603748 (+) |
| G1578702 | NA | non-coding | upstream | 163092 | 70595108 ~ 70596994 (+) |
| G1578889 | NA | non-coding | downstream | 1125 | 70764799 ~ 70766362 (+) |
| G1578905 | NA | non-coding | downstream | 5022 | 70768696 ~ 70768970 (+) |
| G1578906 | NA | non-coding | downstream | 5953 | 70769627 ~ 70770078 (+) |
| G1578893 | NA | non-coding | downstream | 20508 | 70784182 ~ 70784920 (+) |
| G1578927 | LOC100194703 | non-coding | downstream | 78246 | 70841920 ~ 70842153 (+) |
| G1578630 | NA | other | upstream | 340813 | 70418859 ~ 70419273 (+) |
| G1577699 | NA | other | upstream | 995833 | 69762713 ~ 69764253 (+) |
| G1577567 | NA | other | upstream | 1143743 | 69615279 ~ 69616967 (+) |
| si:ch211-215i13.3 | LOC106589127 | other | upstream | 1385169 | 69360411 ~ 69374917 (+) |
| G1579579 | NA | other | downstream | 1374483 | 72138157 ~ 72138592 (+) |
| G1579615 | NA | other | downstream | 1463657 | 72227331 ~ 72227659 (+) |
| G1579986 | NA | other | downstream | 1498742 | 72262416 ~ 72263220 (+) |
| G1580222 | NA | other | downstream | 1832390 | 72596064 ~ 72596671 (+) |
| sync | sync | other | downstream | 2402537 | 73130799 ~ 73174920 (+) |
