LOC118941014


Basic Information

Item Value
gene id LOC118941014
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 71058367 ~ 71059155 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951084.1
ATGGGGTCTGGAGACCACACTAAAGACCGAGACCGAACTAGAGACCGGACGAGAGACCTCCACACTGAGCATTATATCACGTGTGACCTGGCTGACCCTGGAAGCACTGAGCATTATATCACGTGTGACCTGGCTGACCCTGGAAGCACTGAGCATTATATCACGTGTGACCTGGCTGACCCTGGAAGCACTGAGCATTATATCACGTGTGACCTGGCTGACCCTGGAAGCACTGAGCATTATATCACGTGTGACCTGGCTGACCCTGGAAGCACTGAGCATTATATCACGTGTGACCTGGCTGACCCTGGAAGCACTGAGCATTATATCACGTGTGACCTGGCTGACCCAGGAAGCACTGAGCATTATATCACGTGTGACCTGGCTGACCCTGGAAGCACTGAGCATTATATCACGTGTGACCTGGCTGACCCTGGAAGCACTGAGCATTATATCACGTGTGACCTGGCTGACCCTGGAAGCACTGAGCATTATATCAAGTGTGACCTGGCTGACCCTGGAAGCACTGAGCATTATACCACGTGTGACCTGGCTGACCCTGGAAGCACTGAGCATTATATCACGTGTGACCTGGCTGACCCTGGAAGCACTGATCAACAGACAGCAAAAAGGGGAAGAACCAAAGAGAAGGAAGGAAAAACCAGAGAAGGAAGAAGATAA

Function

NR:

description
PREDICTED: zinc finger transcription factor Trps1-like

GO: NA

KEGG:

id description
K24295 HCG22; protein PBMUCL2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951084.1 True 681 mRNA 0.52 2 71058367 71059155

Neighbor

gene id symbol gene type direction distance location
LOC110515436 LOC106570762 coding upstream 105572 70857223 ~ 70952795 (+)
acot13 acot13 coding upstream 281015 70774594 ~ 70777352 (+)
LOC118941216 NA coding upstream 294693 70760086 ~ 70763674 (+)
LOC110515400 tmem64 coding upstream 303936 70723470 ~ 70757121 (+)
LOC110504292 LOC106570754 coding upstream 508374 70499475 ~ 70549993 (+)
LOC118940973 NA coding downstream 149262 71208388 ~ 71209643 (+)
LOC118941017 NA coding downstream 885087 71944242 ~ 71946176 (+)
LOC118941219 LOC103143335 coding downstream 1833699 72892854 ~ 72909233 (+)
yars1 yars coding downstream 1946741 73005896 ~ 73016843 (+)
sync sync coding downstream 2071644 73130799 ~ 73174920 (+)
G1579084 NA non-coding upstream 35735 71022396 ~ 71022632 (+)
G1579069 NA non-coding upstream 53821 71004327 ~ 71004546 (+)
G1579063 NA non-coding upstream 62018 70994532 ~ 70996349 (+)
G1579055 NA non-coding upstream 74563 70978773 ~ 70983804 (+)
G1579056 NA non-coding upstream 75720 70979588 ~ 70982647 (+)
G1579108 NA non-coding downstream 2577 71061732 ~ 71062032 (+)
G1579114 NA non-coding downstream 8139 71067294 ~ 71067681 (+)
G1579118 NA non-coding downstream 16144 71075299 ~ 71075520 (+)
G1579119 NA non-coding downstream 19314 71078469 ~ 71079445 (+)
G1579136 NA non-coding downstream 86737 71145892 ~ 71146350 (+)
G1578630 NA other upstream 639094 70418859 ~ 70419273 (+)
LOC110519153 runx1t1 other upstream 759242 70192261 ~ 70385585 (+)
G1577699 NA other upstream 1294114 69762713 ~ 69764253 (+)
G1577567 NA other upstream 1442024 69615279 ~ 69616967 (+)
si:ch211-215i13.3 LOC106589127 other upstream 1683450 69360411 ~ 69374917 (+)
G1579579 NA other downstream 1079002 72138157 ~ 72138592 (+)
G1579615 NA other downstream 1168176 72227331 ~ 72227659 (+)
G1579986 NA other downstream 1203261 72262416 ~ 72263220 (+)
G1580222 NA other downstream 1536909 72596064 ~ 72596671 (+)

Expression


Co-expression Network