LOC118940973


Basic Information

Item Value
gene id LOC118940973
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 71208388 ~ 71209643 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951035.1
agagagacagagagacagagagagagagagtcagagagacagagagacagagagagagagagacagagagagacagagagagagagagacagagagagacagagagacagagagagagagagtcagagagagacagagagacagagagacagagagagacagagagagacagagagagacagagagagagacagagagagacagagagacagagagacagagagagacagagagacagagagagacagagagagagacagagagagacagagagacagagacagagagacagagagagagacagcgagacagagagagacagagagagacagagagacagagagacagagagagacagagagagacagagagagacagagagagagacagagagagacagagagagacagagagagacagagagacagagagacagagagagacagagagacagagagacagagagagagagagtcagagagacagagagacagagagagagagagacagagagagacagagagagagagagacagagagagacagagagacagagagagagagagtcagagagagacagagagacagagagacagagagacagagagagacagagagagacagagagagacagagagagagacagagagagacagagagacagagagacagagagagacagagagacagagagagagagagagagagacagagagagacagagagacagagacagagagacagagagagagacagcgagacagagagagacagagagagacagagagacagagagacagagagagacagagagagacagagagagacagagagagagacagagagagacagagagacagagacagagagacagagagagagacagcgagacagcgagacagagagacagagagagagacagagagagacagagagacagagagagacagagagagagacagagagagacagagagacagagagagacagagagacagagagagagagagagagacagagagacagagagagagagacagagagagagacagagagagacagagagagagacagagagagacagagagacagagacagagagacagagagagagacagagaaacagagagacagagagagacagagagacagagagagacagagagagagagacagagagagacagagagagagagagagacagagagagagacagagagagacaga
>TU1807310
cagagagagacagagagacagagagagacagagagacagagagacagagagagagagagtcagagagacagagagacagagagagagagagacagagagagacagagagagagagagacagagagagacagagagagagagacagagagacagagagagagagagacagagagagacagagagagagagagacagagagagacagagagacagagagagagagagtcagagagagacagagagacagagagacagagagacagagagagacagagagagacagagagagacagagagagagacagagagagacagagagacagagagacagagagagacagagagacagagagagagagagagagagacagagagagacagagagacagagacagagagacagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951035.1 False 1227 mRNA 0.50 1 71208417 71209643
TU1807310 True 405 lncRNA 0.50 2 71208388 71209162

Neighbor

gene id symbol gene type direction distance location
LOC118941014 NA coding upstream 149262 71058367 ~ 71059155 (+)
LOC110515436 LOC106570762 coding upstream 255622 70857223 ~ 70952795 (+)
acot13 acot13 coding upstream 431065 70774594 ~ 70777352 (+)
LOC118941216 NA coding upstream 444743 70760086 ~ 70763674 (+)
LOC110515400 tmem64 coding upstream 453986 70723470 ~ 70757121 (+)
LOC118941017 NA coding downstream 734599 71944242 ~ 71946176 (+)
LOC118941219 LOC103143335 coding downstream 1683211 72892854 ~ 72909233 (+)
yars1 yars coding downstream 1796253 73005896 ~ 73016843 (+)
sync sync coding downstream 1921156 73130799 ~ 73174920 (+)
LOC110496903 LOC106570720 coding downstream 1992156 73201799 ~ 73281251 (+)
G1579165 NA non-coding upstream 39382 71168776 ~ 71169035 (+)
G1579161 NA non-coding upstream 40219 71167538 ~ 71168198 (+)
G1579151 NA non-coding upstream 49538 71158633 ~ 71158879 (+)
G1579146 NA non-coding upstream 53822 71154182 ~ 71154595 (+)
G1579141 NA non-coding upstream 54724 71153423 ~ 71153693 (+)
G1579213 NA non-coding downstream 1292 71210935 ~ 71211237 (+)
G1579217 NA non-coding downstream 26657 71236300 ~ 71236505 (+)
G1579230 NA non-coding downstream 43532 71253175 ~ 71253744 (+)
G1579239 NA non-coding downstream 54246 71263889 ~ 71264111 (+)
G1579267 NA non-coding downstream 88340 71297983 ~ 71298640 (+)
G1578630 NA other upstream 789144 70418859 ~ 70419273 (+)
LOC110519153 runx1t1 other upstream 909292 70192261 ~ 70385585 (+)
G1577699 NA other upstream 1444164 69762713 ~ 69764253 (+)
G1577567 NA other upstream 1592074 69615279 ~ 69616967 (+)
si:ch211-215i13.3 LOC106589127 other upstream 1833500 69360411 ~ 69374917 (+)
G1579579 NA other downstream 928514 72138157 ~ 72138592 (+)
G1579615 NA other downstream 1017688 72227331 ~ 72227659 (+)
G1579986 NA other downstream 1052773 72262416 ~ 72263220 (+)
G1580222 NA other downstream 1386421 72596064 ~ 72596671 (+)

Expression


Co-expression Network