Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941015 |
| gene name | LOC103363662 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 71847433 ~ 71874670 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: CUB and sushi domain-containing protein 2-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036951085.1 | True | 501 | mRNA | 0.53 | 6 | 71847433 | 71874670 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941218 | LOC106589160 | coding | downstream | 26321 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 67892 | 71321529 ~ 71779541 (-) |
| LOC110496779 | LOC106589151 | coding | downstream | 1057762 | 70776718 ~ 70789671 (-) |
| LOC118941215 | NA | coding | downstream | 1112632 | 70733633 ~ 70735514 (-) |
| LOC118941013 | necab1 | coding | downstream | 1129029 | 70645943 ~ 70718404 (-) |
| LOC118941016 | NA | coding | upstream | 68558 | 71943228 ~ 71944243 (-) |
| csmd1a | csmd2 | coding | upstream | 141251 | 72015921 ~ 72236753 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 1144126 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 1204734 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 1429701 | 73304371 ~ 73363731 (-) |
| G1579781 | NA | non-coding | downstream | 45869 | 71801077 ~ 71801564 (-) |
| G1579762 | NA | non-coding | downstream | 83461 | 71763683 ~ 71763972 (-) |
| G1579749 | NA | non-coding | downstream | 114507 | 71731522 ~ 71732926 (-) |
| G1579741 | NA | non-coding | downstream | 140958 | 71705869 ~ 71706475 (-) |
| G1579733 | NA | non-coding | downstream | 153276 | 71691114 ~ 71694157 (-) |
| G1579811 | NA | non-coding | upstream | 16394 | 71891064 ~ 71891808 (-) |
| G1579827 | NA | non-coding | upstream | 53642 | 71928312 ~ 71928788 (-) |
| G1579830 | NA | non-coding | upstream | 60782 | 71935452 ~ 71935657 (-) |
| G1579831 | NA | non-coding | upstream | 61810 | 71936480 ~ 71937758 (-) |
| G1579854 | NA | non-coding | upstream | 132053 | 72006723 ~ 72009799 (-) |
| G1579715 | NA | other | downstream | 209301 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 328964 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 604340 | 71242691 ~ 71243093 (-) |
| G1579147 | NA | other | downstream | 693156 | 71153837 ~ 71154277 (-) |
| G1579954 | NA | other | upstream | 339504 | 72214174 ~ 72214789 (-) |
| G1580625 | NA | other | upstream | 1173163 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 1650612 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1949361 | 73822008 ~ 74115567 (-) |
