LOC118941017


Basic Information

Item Value
gene id LOC118941017
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 71944242 ~ 71946176 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951087.1
atgcTACCGATCCACGACTTAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCTTGAGTTAAAGCCCTCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTGAGTTAAAGCCCCCAGAGATAAAGCCTCCTTAG

Function

NR:

description
PREDICTED: variable charge X-linked protein 3B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951087.1 True 1209 mRNA 0.50 2 71944242 71946176

Neighbor

gene id symbol gene type direction distance location
LOC118940973 NA coding upstream 734599 71208388 ~ 71209643 (+)
LOC118941014 NA coding upstream 885087 71058367 ~ 71059155 (+)
LOC110515436 LOC106570762 coding upstream 991447 70857223 ~ 70952795 (+)
acot13 acot13 coding upstream 1166890 70774594 ~ 70777352 (+)
LOC118941216 NA coding upstream 1180568 70760086 ~ 70763674 (+)
LOC118941219 LOC103143335 coding downstream 946678 72892854 ~ 72909233 (+)
yars1 yars coding downstream 1059720 73005896 ~ 73016843 (+)
sync sync coding downstream 1184623 73130799 ~ 73174920 (+)
LOC110496903 LOC106570720 coding downstream 1255623 73201799 ~ 73281251 (+)
LOC110496759 nupl2 coding downstream 1450269 73396445 ~ 73418514 (+)
G1579483 NA non-coding upstream 22684 71921327 ~ 71921558 (+)
G1579481 NA non-coding upstream 28075 71912915 ~ 71916167 (+)
G1579479 NA non-coding upstream 32631 71911376 ~ 71911611 (+)
G1579477 NA non-coding upstream 43052 71895738 ~ 71901190 (+)
G1579472 NA non-coding upstream 68289 71875482 ~ 71875953 (+)
G1579502 NA non-coding downstream 24561 71970737 ~ 71971535 (+)
G1579505 NA non-coding downstream 37696 71983872 ~ 71984145 (+)
G1579511 NA non-coding downstream 60071 72006247 ~ 72007776 (+)
G1579516 NA non-coding downstream 71028 72017204 ~ 72018857 (+)
G1579533 NA non-coding downstream 104580 72050756 ~ 72050985 (+)
G1578630 NA other upstream 1524969 70418859 ~ 70419273 (+)
LOC110519153 runx1t1 other upstream 1645117 70192261 ~ 70385585 (+)
G1577699 NA other upstream 2179989 69762713 ~ 69764253 (+)
G1577567 NA other upstream 2327899 69615279 ~ 69616967 (+)
si:ch211-215i13.3 LOC106589127 other upstream 2569325 69360411 ~ 69374917 (+)
G1579579 NA other downstream 191981 72138157 ~ 72138592 (+)
G1579615 NA other downstream 281155 72227331 ~ 72227659 (+)
G1579986 NA other downstream 316240 72262416 ~ 72263220 (+)
G1580222 NA other downstream 649888 72596064 ~ 72596671 (+)

Expression


Co-expression Network