LOC110496760


Basic Information

Item Value
gene id LOC110496760
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 73388761 ~ 73393698 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572793.2
TCCACTAAAAGACAGACGCCTCAATATAAAGTTGTAAATTCAGTCGTATTTTTTAAAATCAGAGAATCACCGAAACAACGAGTTATGAGAGCGAATCAAATTAATGATATttaggtttaaatatatatatttttcaacctTGGAAAGAGAATGAGTGGAGATAGCTTGCGCTGAGAATCCGTGTGTAAAGGTAGACGCACTTTTAGGACGCACAACATATAAACCGTTTCAACTGACTCCACAAGAGATCAGCCATGGATTTTTGCCTCAACACGGACTAAAGTTCGTTCTTGAAGAGGTCCGACCCGCTCCGACCCTGTCCCATACCAGCCCGAATAGTGCAGCAGGTGGAGGATGGCCGAGAGAGTGACTTGGTGGAGAGCGTTTATGGGGAACAATAAGAGAACGAGTAGTGGTACCAAGGACATCGCCACTCAGCTCCCCGACACAATGAAGGACCCTCTGACGCCCAGCACACAGGGAGTCCTAGCAACACCACACTcAGCAGCAGCCCCCAAACTCCCAACCGACCAACAGCCTCCAGCATCACAACAGCTACCAGCATCACAGCAGTCACCAGCGTCACAGCAGCCACCAGCATCACAGCAGTCACAGGCACCAGTCAGTACAGGCAACAGCCTCTTCAGCGACGAGACCTTCGATGACTCCCAGTTTGAGTCGGTCTTCAACGAACAGACGTGTCGTAGGAACCTGAGGGTGTCTCGGTCAGGCCGGTTTAAGGAGAAGAAGAGGGCACGCTCCAGTCTTCCTACTGGGAAAGAGGACGTACGATGACAAGGATGGCGATGAGGATGAGGGAGATAGTGGCCAAAGACTGCTCTTACTTCTGAACTTTATTTCAACATGGCCGTCCGTTCTGGGGAAAGACGAAGGTAGATGAAGATGAATTGTAAGTTGAAGATAAGTTGAGGGTTAATTGAAGATAAGTTGAGGGTAAGTTGAAGATAAATTGAGGGTAAGTTGAAAATAAGTTGAGGGTAAATTGAAGATAAGTTGAGGGTAAATTGAAGATAAGTTTAGGGTAAGTCGAAGATAAATTGAGGGTAAATTGAAGATAAGTTGAGGGTTAATTGAAGATAAGTTGAGGGTTAATTGAAGGAAAGTTGAGGGTAAGTTGAAGATAATTTGAGGGTAAGTTGAAGATAAGTTGAGGGTAAATTGAAGATAAGTTGAGGGTAAATTGAAGATAAGTTGAGGGTTAATTGAAGATAAGTTGAGGGTAAATTGAAGATAAATTGAGGGTAAATTGCAGATAAGTTGAGGGTAAATTGAAGATAAGTTGAGGGTTAATTGAAGATAAATTGAGGGTTAATTGAAGATAAGTTGAGGGTAAGTTGAGGGTAAGTCGAAGATAAGTTGAGGGTAAATTGAAGATAAGTTGAGGGTAAGTCGAAGATAAGTTGAGGGTAAGTTGAAGATAAATTGAGGGTAAGTTGAAGATAGTGATTTGAGACTTTGACTTTACCATTTGGAACCCTTTTGTCAGTACTAGAGAGTCTGAAGTTATACTCTCCTGTACCTCCTGTCTTGTTACATTATAATGGACTGCTGATTGGCAGTAGTGAACATTTCTCAGTGACAGCTAGGTAGGCACTTAACAGTCCTTCCCTGAGGAAATCACAGGTCTGACAAGGTTTGATTGATTTAAAGCAAAAGGAAGACAAGTGTGTCTTTACTAATCCAATCCCATAAAGATCAGTGGTTAGGCTACTTCAAGAAAGGAAGGaagtgagggaggaaggaaggaaggaaggaaggaaggaaggaagggagg
>XM_021572794.2
TCCACTAAAAGACAGACGCCTCAATATAAAGTTGTAAATTCAGTCGTATTTTTTAAAATCAGAGAATCACCGAAACAACGAGTTATGAGAGCGAATCAAATTAATGATATttaggtttaaatatatatatttttcaacctTGGAAAGAGAATGAGTGGAGATAGCTTGCGCTGAGAATCCGTGTGTAAAGGTAGACGCACTTTTAGGACGCACAACATATAAACCGTTTCAACTGACTCCACAAGAGATCAGCCATGGATTTTTGCCTCAACACGGACTAAAGTTCGTTCTTGAAGAGGTCCGACCCGCTCCGACCCTGTCCCATACCAGCCCGAATAGTGCAGCAGGTGGAGGATGGCCGAGAGAGTGACTTGGTGGAGAGCGTTTATGGGGAACAATAAGAGAACGAGTAGTGGTACCAAGGACATCGCCACTCAGCTCCCCGACACAATGAAGGACCCTCTGACGCCCAGCACACAGGGAGTCCTAGCAACACCACACTCAGCAGCCCCCAAACTCCCAACCGACCAACAGCCTCCAGCATCACAACAGCTACCAGCATCACAGCAGTCACCAGCGTCACAGCAGCCACCAGCATCACAGCAGTCACAGGCACCAGTCAGTACAGGCAACAGCCTCTTCAGCGACGAGACCTTCGATGACTCCCAGTTTGAGTCGGTCTTCAACGAACAGACGTGTCGTAGGAACCTGAGGGTGTCTCGGTCAGGCCGGTTTAAGGAGAAGAAGAGGGCACGCTCCAGTCTTCCTACTGGGAAAGAGGACGTACGATGACAAGGATGGCGATGAGGATGAGGGAGATAGTGGCCAAAGACTGCTCTTACTTCTGAACTTTATTTCAACATGGCCGTCCGTTCTGGGGAAAGACGAAGGTAGATGAAGATGAATTGTAAGTTGAAGATAAGTTGAGGGTTAATTGAAGATAAGTTGAGGGTAAGTTGAAGATAAATTGAGGGTAAGTTGAAAATAAGTTGAGGGTAAATTGAAGATAAGTTGAGGGTAAATTGAAGATAAGTTTAGGGTAAGTCGAAGATAAATTGAGGGTAAATTGAAGATAAGTTGAGGGTTAATTGAAGATAAGTTGAGGGTTAATTGAAGGAAAGTTGAGGGTAAGTTGAAGATAATTTGAGGGTAAGTTGAAGATAAGTTGAGGGTAAATTGAAGATAAGTTGAGGGTAAATTGAAGATAAGTTGAGGGTTAATTGAAGATAAGTTGAGGGTAAATTGAAGATAAATTGAGGGTAAATTGCAGATAAGTTGAGGGTAAATTGAAGATAAGTTGAGGGTTAATTGAAGATAAATTGAGGGTTAATTGAAGATAAGTTGAGGGTAAGTTGAGGGTAAGTCGAAGATAAGTTGAGGGTAAATTGAAGATAAGTTGAGGGTAAGTCGAAGATAAGTTGAGGGTAAGTTGAAGATAAATTGAGGGTAAGTTGAAGATAGTGATTTGAGACTTTGACTTTACCATTTGGAACCCTTTTGTCAGTACTAGAGAGTCTGAAGTTATACTCTCCTGTACCTCCTGTCTTGTTACATTATAATGGACTGCTGATTGGCAGTAGTGAACATTTCTCAGTGACAGCTAGGTAGGCACTTAACAGTCCTTCCCTGAGGAAATCACAGGTCTGACAAGGTTTGATTGATTTAAAGCAAAAGGAAGACAAGTGTGTCTTTACTAATCCAATCCCATAAAGATCAGTGGTTAGGCTACTTCAAGAAAGGAAGGaagtgagggaggaaggaaggaaggaaggaaggaaggaaggaagggagg

Function

NR:

description
uncharacterized protein LOC110496760 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572793.2 False 1795 mRNA 0.43 3 73388761 73393698
XM_021572794.2 True 1792 mRNA 0.43 3 73388761 73393698

Neighbor

gene id symbol gene type direction distance location
LOC110517586 LOC106589098 coding downstream 25030 73304371 ~ 73363731 (-)
LOC110496752 LOC106589094 coding downstream 257322 73006005 ~ 73131439 (-)
LOC118941220 NA coding downstream 306865 73079404 ~ 73081896 (-)
csmd1a csmd2 coding downstream 1152008 72015921 ~ 72236753 (-)
LOC118941016 NA coding downstream 1444518 71943228 ~ 71944243 (-)
LOC110496758 LOC106530873 coding upstream 40017 73433715 ~ 73445162 (-)
LOC110489356 LOC106589108 coding upstream 361666 73755364 ~ 73763523 (-)
LOC110496905 LOC106593151 coding upstream 428310 73822008 ~ 74115567 (-)
LOC110487813 NA coding upstream 915784 74309482 ~ 74331094 (-)
mc5ra LOC106589114 coding upstream 1024437 74418135 ~ 74437944 (-)
G1580752 NA non-coding downstream 4708 73383851 ~ 73384053 (-)
G1580748 NA non-coding downstream 7093 73381458 ~ 73381668 (-)
G1580747 NA non-coding downstream 7980 73380499 ~ 73380781 (-)
G1580745 NA non-coding downstream 9515 73378529 ~ 73379246 (-)
G1580680 NA non-coding downstream 18591 73301335 ~ 73370170 (-)
G1580785 NA non-coding upstream 2771 73396469 ~ 73396718 (-)
G1580787 NA non-coding upstream 6550 73400248 ~ 73400493 (-)
G1580788 NA non-coding upstream 9497 73403195 ~ 73419028 (-)
G1580791 NA non-coding upstream 25541 73419239 ~ 73424250 (-)
G1580792 NA non-coding upstream 34397 73428095 ~ 73428554 (-)
G1580625 NA other downstream 340075 73047833 ~ 73048686 (-)
G1579954 NA other downstream 1173972 72214174 ~ 72214789 (-)
G1579715 NA other downstream 1750629 71636487 ~ 71638132 (-)
G1579672 NA other downstream 1870292 71517869 ~ 71518469 (-)
G1580844 NA other upstream 131584 73525282 ~ 73525595 (-)
G1581344 LOC106589111 other upstream 763607 74157305 ~ 74157747 (-)
G1581465 NA other upstream 913080 74306778 ~ 74307678 (-)
G1581622 NA other upstream 1052898 74446596 ~ 74446989 (-)

Expression


Co-expression Network