LOC110496905 (LOC106593151)


Basic Information

Item Value
gene id LOC110496905
gene name LOC106593151
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 73822008 ~ 74115567 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953666.1
cgagagcgctCAGACAGCGAGCTGCGGAGAAAAATAACGGACCAGCCACCGCGCTGGATCTCTCCTCCTTACCGACGCGGGGGGGGGAACCAAACCGAGGAATACTGGTGTTTTATTCAAACGAAGAAACGGGTCTAAAACCTCGCTGAACAGACAAGATTCCTGGCAGAGTGTGTGAGCGCTACAGGGGATCAGTCGGTGTGTTTGTGAGAAGTACTTTCCTAACGGCAGACATGGAGACCCATTTCCTGATGAGAGTGTTGTGAGTCCGGCGCAGCCCTGTCGCGCCCACAGCGTCCCCTCTCGGCCCGGGTGGCCCACCACGGCCCCCCGGCCTCCTCAATGAAGGGGTATCATGTCAGCCGCAGCCTGTCCCAGCACTCTTCTGGCGGGGGGCACACACAATGTGACCCGGGCCCGGGCCCTGGCTCCGTCCGAGAGTACCACCGCCACCCCTCTGAACACTACGACCGGGCGGGGAACCCCTTCTACGCCCCCGGTGGTCCCCCAGAACCCCTAGCTCTGGAGCATCGCTCCCACACCCACTCTGGAGGGGGGACGTTCCCCCGCTCCCACCCCAACCAGCATCCCCCGACCCAGCAGTTGTACGACTCATGTGAGGATTGTCTGTCCACGGTGGGGGGTCACGGGGGTAAGATGCATCGCATGCCTCCTAACCTCCAGGATCAGTTTGAAAAGCAGCTTCCCTTCCACCCTGACGGGTTCCACACCCTGCAGTACCAGAGGAGCGCCAGCGGGGCGGAACAGCGCGGCGAGAGCCCCTCCCGTATCCGCCACCTGGTTCACTCAGTCCAGAAACTCTTCGCCAAGTCCCACTCCCTCGAGGCGCCGTCAAAGAGGGAATACAACGGCACACGAGGAGGGGAATAccgagaaagaggaggaggggggcccaggagcggaggagaggaagGTGGCGGGCATAATCATTCGGGCCACCAATCCCGCTCGGCGAGGCGCAGCAAATCCCGCGAGCGCTCCAAAAGCGGGGATGGGCGCCACGAATCCTCCAGCAGGCGGCACAGGAGCCGAACCGCGGGGTGGTGGAGCTCCGACGACAACCTCGATAGTGACAGCAGCTTCTTGGTAACCGGGGGCAACACCGGGCCAGGTGGTCGAGGTGGCGGGCGAGGCGGATACCCCACGGGCCACGAGAGTCTGGACGCTGCCATCCAGGAGCTGACCATGAAGAAACTGCCCAGACAGGGGAGTGTACCACCAGGGCCCGGGCCGGGGGAGTGCATGGCCTGTACCACTCTGGCCCTGGCAGGgggggagggtggtggagggggagtgGCAGGGTACCATGGAGGGCCAGGACAACACTCTCTGAAGAGGAGCACGTGGTCGGCCATGACGGTCAGCCAGGCTAGAGAGGTGTACCCATCGTCTGtccggggaggaggaggaggaggaggaggaggaggctatGACAAGGCCTTGGTACCTCTGGAGAACAAACTGAAGGAGAGGACCTTTCACTACTTacaggtccCGTCAGACGGGGTGGAGTGGGGTGGTCCTGACGGAGAGGGGGAGATCCCCTGCAGGCGCATGCGGAGCGGCAGCTACGTTAAGGCCATGGGAGACGACGACAGTCAGGACTCTGATGCCAGTCCTAAAGCCTCTCCTAAAACCACCATCATCGCCCAGAGAGAGGCCTTCAGACGCTCTGTCAGCATGGACCACAGGTCATCTGCCACCAAgtactcATGTAAGCAGTGTGTAGATTCTACTCTACCCTATGCTAACAGCCGAACCAAGCCCAAAAACCACGCCCGCTCTCGGAGCTACACTCGTTCTTTAACCAGCTCACAGctGGGTGACTCTCTGAATCGTCAGTTTGAAGCGGTGTGTGAGACCATGTTTGGAGAGATTGAGAGTCAGGCGGTGGAAGCCTTGGATCTACCTGGATGCTTCCGGACCCGTTCCCATAGTTACGTCCGCGCCATCCAGGCCGGCTGTTCCCAAGACGACGACTGCCTGTCCGTCTTCTCCATATCGGGACCCCAGGGTAGCATCAAGGGAGGAGccatttttCCATACCGTAAGGGTggccctccccccctccctcctcgtATGTCCAAGCCTATCATCTCTGTGAGGGCTCAGAGTAGTACAGAGTCTACCCAGGATACCTACTTCCAGAACACAGGCCAGCCTGCCCTGGGACGACCCAGGCAACACCATAGCCACTCTGTCGACCTGGGAATCACTGATGTTGTGGTGTCTGGTCAGACCTCCAGGGGATCCAGGGAAGGAGGTTACTACACAGGACCAGGACAAGGCCGCTCCCGCCAGCACTCCAACTCAGCCGAGAGTCTGGACGGGGTCCTCCGGGGCGGGCGTGAGCTGATGCCctatggaggaggaggacagggaccCATCAGAGTCAAACACAGTGGCTCCGCGGATAGTCTCCTGGAGGGGcccaggggaagggagaggggagagagggatatgagGCGGGCAGGGGGGAGTCTGTGGAAGTCTGCCTCCCTCCCACAGAACAGTATGGTGCTGAGtaagatgggaggaggaggaggaggaggaggaagaggaggaggacaggaggagaacaagacagagggaagaggaaggaATTGGAGGCCTTCTATCGCTGTACAGGTGGACAGCCCGGGGACCCTGACAGACTCGGACGCGGAGAgcaaggctctgagagaggttcACTCTATAGGAGTGCAGGTGGAGGAAGACAAGAGgcgTGCTCGGTTCAAGCGCTCCAACAGCGTGACGGCCGGCGTCCAGGCAGACCTGGATCCAGAGGGGGGTTACCCAGGCCTCACCATCGCTGTACCTACCCAGGATAAGAACCTACAGTTCCCAGGCCACACCATCGCTGTTCCTACCCAGGATAAGAGCCCCCAGTTCGGCTGCTCCTTCCAGAGACACTCCTCAGAGCCAGGGTCAACCGACCAGTACGCAGAGTACCACCGCACGGTGCACACCCAGGGCCAGTGGACCTACAGAGAGGACTATGTTCAGGATGGTTACGCTACAGACAACCACCAGATCCCCCCGCTGCCCCCGCGGGCCCACTCCCCCCTGCCCCTCGCTGCGGACCGTGGAGGCTGGACAGGTACACCCCAGCCCTCACTGGAGGGGGGCCCCCGGAGTCTGCCCGACTCTGGTCGCGCCTCGCCCTGTCTGAGAGACGGAGAGTTTTTCCTACGCCTCCTTcagatggaggtggagaggatggagggatggtgtcagaacatggagagagaggcggaggagAACGAGCTGCCGGAGGAGGTTCTGGAGCTGATCCGTAATGCGGTGGGCAGTGCCCAGATGCTCATGTCTCAGAAGGTCCAGCAGTTCTTCCGTCTGTGCCAGCAAAGcgtggACCCCTCAGCATACCCCCAGCCCACCTCTCAGGACCTGTCCGGGCTCTGGGACCTGCTCCAGCTCAACATGGAAGACGTCAGGGTCAAGTTCCAGCACCTCCAGAGGCTCAAGGACTCCGGCTGGAGGCTTCCCCCAGACAAGAAGGATGACAAGAAGCTTCCTCCCCCACTACCAAAGAAGCCAGCTGGGGGAGTGAGTGGCAGTCTCCGTGCTGACAGCGTCAACGACCTCTCAGTGGAACGAGGGGTAGGAGGAGGCGGAGGGGTGTTGGTGATGGCCCGTAGCGGGGGTGTGGGACGGGCCGTGCCTATCCGGGAGAAGTCCTTAGACctgggggacagacagaggacTGAGGCACGCAGGAGACTGCTCCAGACCAAGAGGTCCTCTTCCTTCAGACAGAACTCAGCCACGGAGAGCGCCGACAGCATCGAGATCTACATCCCAGAGGCTCAGACCCGGCTCTGAACATGGTGATACAGCCCTTTATCCCAGTGAACAGAACCGACCCGACGCCTGGGACAGCCTAAATATAGAGATATAGCTAGCTATCCCAACCTAGAACGACCACAACCATTGAGATCTACATCCCGGAGGCTCAGACCCAGTTCTGAACACTGGAACCAACTAAACGTGGAGATACAACCTATTTTCTGAGGATCCTGGATCAACCAAAACTCTCCCAAGTTCCATACACTGATCCCCCCTCTCCCAATGACGATATGGGCCATACTGACTTTCTCAAGCCTTCACTGTTGGGGGATGCTGGGTCCCATCGTCATGGCATTCCATGGACGAGGCAAGACAGAAGGGGAGAGCCATTTGTGCCCTGGAACTTTGAATCCCcaataaacaaacacaaacaatcTGTGGCGAGAATGATGACTACGGGGATCACAgttgactccacacacacatttatttccCTCATCTTAgtcggggggagagagagatagagctgtaaAATACAGTGACAGTCACTGAAAGGTGTAGTCATGCAATAGTAGCATGTCTGTGCATGCCTGTCCACCTATAGCGTAGCCTAGCCACGCCTGGAATAGCCTAGCCTATCTTAGCCTCTTAGCTCATCTTAGCCTCTTAGCCTATCTTAGCCTCTTAGCTCATCTTAGCCTCTTAGCCTATTTTAGCCCATTTTAGCCTCTTAGCTCATCTTAGCCTCTTAGCCTATCTTAGCCTCTTAGCTCATCTTAGCCTCTTAGCCTATCTTAGCCTAGCTTCCATCTTCACAGGAAATAAGGGCTTCACAAATCTCAACCACTCTTGTGGGCATGGAGCAGATTCTCCCTCTAAATGGCCACTCAACATCACCCAAGGCTCTAAAGGTAATCTCAATATCAACTAGCTACCGTTCGACGCCATTTGGCTAGTTGGCTGCATCCTCTGAAGACTGTGTTAATACACACTCACTCAACATTCAACTGTGGATTTCATTTTAACCTACATGCCTCCTACACATGTCCCGGTCAACACTCATTCACCTAAGGTTTTATTCTCTCGCGACTCCTTCCTATTGGCCCGAGCATCCATCAATCTACCAGCTGTCTGGGCAGCAGTGTACTGTTTGAAGGAGagtgtgtttttctttttttgtacaTCGTTTTGAACGATGCTGTTCACCAGCTATCTAGTGTGGCACGGTATACTTGACAGCCAGAGAacatcacaaacaaacaaaaaaccttgaagctgttttcatttttttgttaTAGATATTCCTTCTGAAGTGTAAAAGGTTTGGCAGTGGGTGGGTGGtttgattctttttttttttttgagttttAGAGTTTTTCAGAATATTGAAATTTCACAACAGGGGATCCTTTTTCACTGTGAGACAATGGCACCCCCTGGTGGCCAAAATGAGAATCACAGAATAACTGTCAGAGGAGGAGGGTGTGTGGGACTGGGGAATATCGGCCTCATAAAAACAGGAGACTTACGTAGCAAAAAAAGTCTTATGTATTTTTTagatatatttattacatttccaACAAAAATGATTTTTTTCAAGATTGGATCGACAAGCAAAATGGCAAAATGAATTGAAGAGCTGCGAGAATTGAAGGCGATTTCTCTGCCTGTCAGCTTCCTCCTCCCTCTATGTAACTTCAGCACAAGACCCTTCCAACGGAGAGAGGGATTAACTCTTTGCTctcctttcaccccccccccccccctccctctctctctctctctcttcctgtctctcaattcaattcaattcaa
>TU1809846
GTTTTTCCTACGCCTCCTTcagatggaggtggagaggatggagggatggtgtcagaacatggagagagaggcggaggagAACGAGCTGCCGGAGGAGGTTCTGGAGCTGATCCGTAATGCGGTGGGCAGTGCCCAGATGCTCATGTCTCAGAAGGTCCAGCAGTTCTTCCGTCTGTGCCAGCAAAGcgtggACCCCTCAGCATACCCCCAGCCCACCTCTCAGGACCTGTCCGGGCTCTGGGACCTGCTCCAGCTCAACATGGAAGACGTCAGGGTCAAGTTCCAGCACCTCCAGAGGCTCAAGGACTCCGGCTGGAGGCTTCCCCCAGACAAGAAGGATGACAAGAAGCTTCCTCCCCCACTACCAAAGAAGCCAGCTGGGGGAGTGAGTGGCAGTCTCCGTGCTGACAGCGTCAA
>TU1809850
GAACAGTATGGTGCTGAGtaagatgggaggaggaggaggaggaggaggaagaggaggaggacaggaggagaacaagacagagggaagaggaaggaATTGGAGGCCTTCTATCGCTGTACAGGTGGACAGCCCGGGGACCCTGACAGACTCGGACGCGGAGAgcaaggctctgagagaggttcACTCTATAGGAGTGCAGGTGGAGGAAGACAAGAGgcgTGCTCGGTTCAAGCGCTCCAACAGCGTGACGGCCGGCGTCCAGGCAGACCTGGATCCAGAGGGGGGTTACCCAGGCCTCACCATCGCTGTACCTACCCAGGATAAGAACCTACAGTTCCCAGGCCACACCATCGCTGTTCCTACCCAGGATAAGAGCCCCCAGTTCGGCTGCTCCTTCCAGAGACACTCCTCAGAGCCAGGGTCAACCGACCAGTACGCAGAGTACCACCGCACGGTGCACACCCAGGGCCAGTGGACCTACAGAGAGGACTATGTTCAGGATGGTTACGCTACAGACAACC

Function

NR:

description
disks large-associated protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953666.1 False 5643 mRNA 0.56 14 73822008 74115567
TU1809846 False 417 TUCP 0.59 4 73824031 73827937
TU1809850 True 521 TUCP 0.59 4 73828092 73833204

Neighbor

gene id symbol gene type direction distance location
LOC110489356 LOC106589108 coding downstream 58485 73755364 ~ 73763523 (-)
LOC110496758 LOC106530873 coding downstream 376846 73433715 ~ 73445162 (-)
LOC110496760 NA coding downstream 428310 73388761 ~ 73393698 (-)
LOC110517586 LOC106589098 coding downstream 458277 73304371 ~ 73363731 (-)
LOC110496752 LOC106589094 coding downstream 690569 73006005 ~ 73131439 (-)
LOC110487813 NA coding upstream 193915 74309482 ~ 74331094 (-)
mc5ra LOC106589114 coding upstream 302568 74418135 ~ 74437944 (-)
ldlrad4a LOC106589113 coding upstream 380815 74496382 ~ 74540849 (-)
G1581185 NA non-coding downstream 8702 73810121 ~ 73813306 (-)
G1581186 fuca1 non-coding downstream 31894 73787827 ~ 73790114 (-)
G1581181 NA non-coding downstream 62760 73757979 ~ 73759248 (-)
G1581177 NA non-coding downstream 85623 73735927 ~ 73736385 (-)
G1581332 NA non-coding upstream 11514 74127081 ~ 74127956 (-)
G1581346 NA non-coding upstream 44198 74159765 ~ 74160167 (-)
G1581360 NA non-coding upstream 70801 74186368 ~ 74186660 (-)
G1581363 NA non-coding upstream 75441 74191008 ~ 74191226 (-)
G1581447 NA non-coding upstream 177178 74292745 ~ 74298979 (-)
G1580844 NA other downstream 296413 73525282 ~ 73525595 (-)
G1580625 NA other downstream 773322 73047833 ~ 73048686 (-)
G1579954 NA other downstream 1607219 72214174 ~ 72214789 (-)
G1579715 NA other downstream 2183876 71636487 ~ 71638132 (-)
G1581344 LOC106589111 other upstream 41738 74157305 ~ 74157747 (-)
G1581465 NA other upstream 191211 74306778 ~ 74307678 (-)
G1581622 NA other upstream 331029 74446596 ~ 74446989 (-)
G1581629 NA other upstream 342115 74457682 ~ 74458316 (-)
G1581737 NA other upstream 406591 74522158 ~ 74532080 (-)
G1581250 NA non-coding upstream 128424 73961628 ~ 73962196 (-)
G1581257 NA non-coding upstream 145543 73978747 ~ 73979360 (-)
G1581262 NA non-coding upstream 154789 73987993 ~ 73988302 (-)
G1581275 NA non-coding upstream 178107 74011311 ~ 74012603 (-)
G1581298 NA non-coding upstream 216488 74049692 ~ 74052774 (-)

Expression


Co-expression Network