mc5ra (LOC106589114)


Basic Information

Item Value
gene id mc5ra
gene name LOC106589114
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 74418135 ~ 74437944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953667.1
acagcaaaggaccttgtgaagatgctggaggaaacagttacaaaagtatctacatccacaGAACAGGATGCTCCTGACAACGTGCCAGTGaattgaaaagagagagagctgaaGGTAAACTCAAAGTTATAAAGATGAACCCTATGGAGAAAATGACGACCATGTCTCTGCCGATGTGGGCTCTGTTCGCCAACTCCAGCGAGCTGTACTACAACCCCAACACCACTGTGGCCCCTAATTTCCTCACCAAACCCAAGGCCTGTGAGCAGCTCAACATCGCCACAGAGGTCTTCCTCATCCTGGGTATTATCAGTTTGTTGGAGAACATCCTGGTCATCTGCGCCATCATCAAGAACAAGAACCTCCACTCCCCCATGTACTTCTTTGTGTGTTCCCTGGCTGTGGCCGACATGCTGGTCAGTGTCTCCAACGCCTGGGAGACCATCATCATCTACCTGCTGACCAACCGGCAGCTCATTGTGGACGACCATTTTATTCGTCAGATGGACAACGTCTTTGACTCCATGATCTGTATATCAGTGGTGGCGTCTATGTGTTCTCTCCTGGCCATCGCTGTGGACCGGTATGTGACCATCTTCTACGCTCTGCGTTACCACAGCATCATGACCCATAGACGGGCCGCTCTCATCATCGGAGCCATCTGGACCTTCTGCACGGGCTGCGGCATCGTCTTTATCATGTACTCCGACACCACCCCTGTTATCATTTGCTTGGTGTCCATGTTCTTCACCATGCTGGTGCTCATGGCCTCGCTGTACAGCCACATGTTCATGCTGGCTCGCTCCCACGTCAAGCGCATCGCGGCTCTGCCAGGGTACAACTCCATCCACCAGAGGGCCAGCATGAAGGGAGCCATCACTCTCACAATCCTCCTGGGCATCTTCATCGTCTGCTGGGCACCCTTCTTCCTCCACCTTATCCTGATGATCTCCTGCCCCAGGAACCTGTACTGTGTGTGCTTCATGTCTCACTTCAACATGTACCTCATCCTcatcatgtgtaactctgttatcGACCCTCTGATCTACGCCTTCAGGAGTCAGGAGATGAGGAAAACCTTTAAGGAGATTATCGGTTGCTACAGCCTGAGGAATGTGTTTGAGTGTCTCCCTGTGTGCTATAAACCTGGAGTGCCATAGAACTCTTACCCTTATAGACTCTTTGGCCATGGGTCCTACGTGTGGTTTAGTCAGCAGGATTTGGGCATGAACAGAGTGCATTGGAGTAGAAGACTGTCTTATTAAAATGTGTCTTAGACTGCCTTGTCCCAATGCAGTCTGATTAAGCTCAACTTGTAGAACTCTTTGTTCCTTAACACTAGAACTGCTAAAGCAGTCATTTTGACCCTACAGTGTATATCCATCCACCGAATCAAAGCAGTCTCATCAGCCTACTCTGGCCTACTTGGAGTAGGCTACACAGTGAGAGCGTGAGTAATTGTACATGCTGAACGGCTTTCAATACACATCAGGCAGCAGGTGAGCGAGTGTCAAAGAATGTGGGGATGAGGCAAGGGGAGTAATGTCACCATGGACAACTTCTTCACTGTCATTGGAGAACAAGTTCCTTGTGGCCGGCACAATGAACAAAGTTAGACgtgctccccctccctctgtgcaAAATAAAGCACCTGAACAGCCGTTATACTCCACAAAGAAGCTGAAGAATGACAAGAACACAATAAAAATAAGACTATTACGCACTATAACCAAACAAAGGTATGTCAAAGTGGGTCAAGCAAGTGAAAGTTACAAAAATTGTGTCAACTGTTAGGACAAGGGATAACAGCTAAATGAAATCCAACTGATGCCATTGAGTGAAGATACACACAAGCACGAGCTGACAATAATTTACTATTTTAATCTGCTGTCATATCTACACTTATATTCATTAGAATGCCTTTATTGATTTTGTGCTGAGTTTCACTATTTATCAAGGCCACATGGCACTTATAATGATGTTGAGGCTGCTGATGTTTTTATCTTTTGACCACTTGACCATGCATCTTGGTATTTTGGGGTAGTTATTAAAATAAGCTGTTACCATGTTCCAACACATATGCTTTCTTTTTCATAGTTGTAACAAAGGCACTCCACTAAtaaaattgattgaacatgatttatTTAAACATTTGTCATATGTCCTGCAGTAAATACAATTATGAAAATGCTCTTCTGTtttttgaaataaaataaaaatagggtAA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004977 melanocortin receptor activity molecular_function

KEGG:

id description
K04203 MC5R; melanocortin 5 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953667.1 True 2227 mRNA 0.45 2 74418135 74437944

Neighbor

gene id symbol gene type direction distance location
LOC110487813 NA coding downstream 87041 74309482 ~ 74331094 (-)
LOC110496905 LOC106593151 coding downstream 302568 73822008 ~ 74115567 (-)
LOC110489356 LOC106589108 coding downstream 654612 73755364 ~ 73763523 (-)
LOC110496758 LOC106530873 coding downstream 972973 73433715 ~ 73445162 (-)
LOC110496760 NA coding downstream 1024437 73388761 ~ 73393698 (-)
ldlrad4a LOC106589113 coding upstream 58438 74496382 ~ 74540849 (-)
G1581522 NA non-coding downstream 58755 74358709 ~ 74359380 (-)
G1581498 NA non-coding downstream 109056 74308506 ~ 74309079 (-)
G1581461 NA non-coding downstream 114170 74303747 ~ 74303965 (-)
G1581454 NA non-coding downstream 118040 74299890 ~ 74300095 (-)
G1581447 NA non-coding downstream 119156 74292745 ~ 74298979 (-)
G1581627 NA non-coding upstream 18007 74455951 ~ 74456215 (-)
G1581634 NA non-coding upstream 29015 74466959 ~ 74467199 (-)
G1581636 NA non-coding upstream 32394 74470338 ~ 74470621 (-)
G1581715 NA non-coding upstream 49532 74487476 ~ 74488184 (-)
G1581716 NA non-coding upstream 56809 74494753 ~ 74495356 (-)
G1581465 NA other downstream 110457 74306778 ~ 74307678 (-)
G1581344 LOC106589111 other downstream 260388 74157305 ~ 74157747 (-)
G1580844 NA other downstream 892540 73525282 ~ 73525595 (-)
G1580625 NA other downstream 1369449 73047833 ~ 73048686 (-)
G1581622 NA other upstream 8652 74446596 ~ 74446989 (-)
G1581629 NA other upstream 19738 74457682 ~ 74458316 (-)
G1581737 NA other upstream 84214 74522158 ~ 74532080 (-)
G1581793 NA other upstream 170544 74608488 ~ 74613460 (-)

Expression


Co-expression Network