G1508795 (LOC105007615)


Basic Information

Item Value
gene id G1508795
gene name LOC105007615
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 117979 ~ 123374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1725660
CTTTAGCGACCACCATCCTCAACTTGTCCCCACTGTCCACCACAAAGATGATGGCTTGACCCtccTTGTAGTAATGTTCCCAGAGGTTTCTGTATCGCCCTTGGCCAGACATGTCGAACACTGTgaaggagagaCTTGATGTCTTGAACTTCTCGATGCTGAAGCCAATGGTCGGGACGATGTCTTGTGTCTGGGCATTGGATGGTTTGAGTCGGTTGATGATGGTGGTCTTGCCGCTGTTGTCCAATCCCAGACACAGAACATTCACTTCCTTCTTCTTCAGCCCCAACCAGCCAGCTAGTTTATCAAACAGACCCATTGTTGTTCTGTCTTACTcccggggggg

Function

NR:

description
PREDICTED: ADP-ribosylation factor-like protein 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1725660 True 346 lncRNA 0.51 4 117979 123374

Neighbor

gene id symbol gene type direction distance location
LOC110528717 LOC106575929 coding upstream 28478 76903 ~ 89501 (+)
LOC118941071 NA coding downstream 298906 422280 ~ 426131 (+)
LOC110516182 LOC106575004 coding downstream 417006 540380 ~ 550487 (+)
LOC110515805 LOC106575000 coding downstream 431556 554930 ~ 570129 (+)
LOC110515393 LOC106575008 coding downstream 466368 589742 ~ 621439 (+)
LOC118941073 LOC106575007 coding downstream 651476 774850 ~ 784873 (+)
G1508794 NA non-coding upstream 3799 113258 ~ 114180 (+)
G1508791 NA non-coding upstream 8371 108931 ~ 109608 (+)
G1508779 NA non-coding upstream 9294 104609 ~ 108685 (+)
G1508790 NA non-coding upstream 12292 104875 ~ 105687 (+)
G1508788 NA non-coding upstream 27296 90471 ~ 90683 (+)
G1508802 NA non-coding downstream 3357 126731 ~ 127162 (+)
G1508804 NA non-coding downstream 6816 130190 ~ 132541 (+)
G1508810 NA non-coding downstream 26467 149841 ~ 150343 (+)
G1508816 LOC106591674 non-coding downstream 41206 164580 ~ 165511 (+)
G1508883 NA non-coding downstream 80335 203709 ~ 216458 (+)
G1508964 NA other downstream 211058 334432 ~ 335177 (+)
G1508979 NA other downstream 241553 364927 ~ 367431 (+)
G1509015 NA other downstream 319429 442803 ~ 444877 (+)
G1509068 NA other downstream 483248 606622 ~ 607207 (+)

Expression


Co-expression Network