G1508816 (LOC106591674)


Basic Information

Item Value
gene id G1508816
gene name LOC106591674
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 164580 ~ 165511 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1725684
tgtctcggtacCTGCTCCTATCACCCTCTCGATGCGTATTCTAGAAGGATCTATCTCCTTGGTGAACTCGTGGACAGCCTGCGTTGGGTCTTCATATGTGTCAGGATCCACATACGTCTTGATACCAGGGAAAGGAAGCACGTTCTGAAAGTGAGCCCTCCTCTTATCGTCTGACTGCATCTTAGCCTTGATGAACACCTGACACCTGGaccaggagagagacacacagcggaCGATGTCAGGTTCCTGTCTGGCTACAttacagacaggtagaggttCCTGTTTGGCTACAttacagacaggtagaggttCCCGTCTGGCTACAttacagacaggtagaggttcctgtctggctacattacagacaggtagagGTTCCTGTCTGGCTACATTACAGACACATGTCAGGTAGAGGGTCCTGTCTGGCTACATTACAGACACATGTCAGGTAGAGGTTCCTGTCTGGCTACATTACAGACACATGTCAGGTAGAGGTTCCTGTCTGACTACATTATAGACACATGTCAGGTAGAGGTTCCTGTCTG

Function

NR:

description
PREDICTED: ephrin type-A receptor 6-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1725684 True 545 lncRNA 0.49 3 164580 165511

Neighbor

gene id symbol gene type direction distance location
LOC110528717 LOC106575929 coding upstream 75079 76903 ~ 89501 (+)
LOC118941071 NA coding downstream 256769 422280 ~ 426131 (+)
LOC110516182 LOC106575004 coding downstream 374869 540380 ~ 550487 (+)
LOC110515805 LOC106575000 coding downstream 389419 554930 ~ 570129 (+)
LOC110515393 LOC106575008 coding downstream 424231 589742 ~ 621439 (+)
LOC118941073 LOC106575007 coding downstream 609339 774850 ~ 784873 (+)
G1508810 NA non-coding upstream 14237 149841 ~ 150343 (+)
G1508804 NA non-coding upstream 32039 130190 ~ 132541 (+)
G1508802 NA non-coding upstream 37418 126731 ~ 127162 (+)
G1508795 LOC105007615 non-coding upstream 41206 117979 ~ 123374 (+)
G1508794 NA non-coding upstream 50400 113258 ~ 114180 (+)
G1508883 NA non-coding downstream 38198 203709 ~ 216458 (+)
G1508897 NA non-coding downstream 63235 228746 ~ 229394 (+)
G1508920 NA non-coding downstream 81158 246669 ~ 247205 (+)
G1508925 NA non-coding downstream 105721 271232 ~ 272111 (+)
G1508941 NA non-coding downstream 119091 284602 ~ 285959 (+)
G1508964 NA other downstream 168921 334432 ~ 335177 (+)
G1508979 NA other downstream 199416 364927 ~ 367431 (+)
G1509015 NA other downstream 277292 442803 ~ 444877 (+)
G1509068 NA other downstream 441111 606622 ~ 607207 (+)

Expression


Co-expression Network