G1508883


Basic Information

Item Value
gene id G1508883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 203709 ~ 216458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1725810
ctctctttccatctctctctctctctctgtctctctctgtctctcttttcatctctctctctctctctccctcactccctcactccctctctgtctctccctctctctctctctctctctctctgtctctctctctgtctctctctctctctgtctctctctctgtgtgtctctctctgtgtctctctctgtgtgtctctctctgtgtgtctctctctgtgtgtctctctctctgtgtgtctctctgtgtgtctctctctctgtgtgtct

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1725810 True 270 lncRNA 0.50 2 203709 216458

Neighbor

gene id symbol gene type direction distance location
LOC110528717 LOC106575929 coding upstream 114208 76903 ~ 89501 (+)
LOC118941071 NA coding downstream 205822 422280 ~ 426131 (+)
LOC110516182 LOC106575004 coding downstream 323922 540380 ~ 550487 (+)
LOC110515805 LOC106575000 coding downstream 338472 554930 ~ 570129 (+)
LOC110515393 LOC106575008 coding downstream 373284 589742 ~ 621439 (+)
LOC118941073 LOC106575007 coding downstream 558392 774850 ~ 784873 (+)
G1508816 LOC106591674 non-coding upstream 38198 164580 ~ 165511 (+)
G1508810 NA non-coding upstream 53366 149841 ~ 150343 (+)
G1508804 NA non-coding upstream 71168 130190 ~ 132541 (+)
G1508802 NA non-coding upstream 76547 126731 ~ 127162 (+)
G1508795 LOC105007615 non-coding upstream 80335 117979 ~ 123374 (+)
G1508897 NA non-coding downstream 12288 228746 ~ 229394 (+)
G1508920 NA non-coding downstream 30211 246669 ~ 247205 (+)
G1508925 NA non-coding downstream 54774 271232 ~ 272111 (+)
G1508941 NA non-coding downstream 68144 284602 ~ 285959 (+)
G1508949 NA non-coding downstream 77625 294083 ~ 294322 (+)
G1508964 NA other downstream 117974 334432 ~ 335177 (+)
G1508979 NA other downstream 148469 364927 ~ 367431 (+)
G1509015 NA other downstream 226345 442803 ~ 444877 (+)
G1509068 NA other downstream 390164 606622 ~ 607207 (+)

Expression


Co-expression Network