G1508967


Basic Information

Item Value
gene id G1508967
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 344045 ~ 345453 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1725912
CAGCAGTCTGTAGTATAGCCAAGGCCTTCCCTCCAGGAGCCGAGCAGAGATCCAGGACcctgtccccctcctctacccccaggGCTAAGACAGGCAGCAGGGAGGCAGCGTTCATCAGGTAGTAGGGTTTCAACTGGCCCTGgcggtgaggaggagaggggtaacgCACTGGGGAGGGGTGGATGAAACactgaagggagggaggaggaggaccgggGTGAGGGATGGAGCTAGGCTGGGTGGGAGAGGCAGGgtgaggctgggggagagaggagttaAGAGGCAGGTCCGTGTGGGGCAGTAGACTGACAAAGCCTTGCCCTTGGAGGCGTTGTTTGACCTCTGACACCGCAGCAAAACGgttgaGCATCACTCCATACTGCCAGCACCCAGGGTTCAACAACACCTTtccctttgtcagggaggtgaccaagaacctgatggtcactaacagagctccagagttcctctttggagatgggagaactttctagaaggacaaccatctctgcagcactccaccaatcaggcgtttatggtagagtggccagatggaagccactcgtcagtaaaaggcacatgacagctcgcttggagttttccaaaaggcacctaaagactctcaaacaagattccctggtttgatgaaatcaagattggtttctttggcctgaatgccaagcgtgccaagtctggaggaaacctggcaccatcctgctgtgtggatgtttttcagcggcagggactgggagactagtcaggatggagggaaagatgaacggaacaccgagagatccttgatgaaaacctgctccaaagcgctcaggacctcagactggggcgaaggttcaccttccaataggacaacgaccctaagcacacaaccaagacaacgcaggagtggcttcaggacaagtcactgaatgtccttcagtgtcCCAGCAGGAacacggacttgaacccgatcaaacatctctggagagacctgaaaatatctgtacaacgacactccccatccaacctcacagagcttgagagaatctgcagagaggaatgggagaaactccccaaatacaggtgtgccaagcctgtagcgtcatactcaagaagactcaaggctgtaatcgctgcctaaggtgcttcaacaaagtactgagtaaagggtctgaatacttatggaaaaaTGTGATTTCAGgttgttgttattttttttattatatacattt

Function

NR:

description
tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1725912 True 1226 lncRNA 0.52 3 344045 345453

Neighbor

gene id symbol gene type direction distance location
LOC110528717 LOC106575929 coding upstream 254544 76903 ~ 89501 (+)
LOC118941071 NA coding downstream 76827 422280 ~ 426131 (+)
LOC110516182 LOC106575004 coding downstream 194927 540380 ~ 550487 (+)
LOC110515805 LOC106575000 coding downstream 209477 554930 ~ 570129 (+)
LOC110515393 LOC106575008 coding downstream 244289 589742 ~ 621439 (+)
LOC118941073 LOC106575007 coding downstream 429397 774850 ~ 784873 (+)
G1508949 NA non-coding upstream 49723 294083 ~ 294322 (+)
G1508941 NA non-coding upstream 58086 284602 ~ 285959 (+)
G1508925 NA non-coding upstream 71934 271232 ~ 272111 (+)
G1508920 NA non-coding upstream 96840 246669 ~ 247205 (+)
G1508897 NA non-coding upstream 114651 228746 ~ 229394 (+)
G1508969 NA non-coding downstream 763 346216 ~ 348477 (+)
G1508970 NA non-coding downstream 3159 348612 ~ 349176 (+)
G1508968 NA non-coding downstream 3948 349401 ~ 349841 (+)
G1508971 NA non-coding downstream 4419 349872 ~ 350200 (+)
G1508972 NA non-coding downstream 4768 350221 ~ 355510 (+)
G1508964 NA other upstream 8868 334432 ~ 335177 (+)
G1508979 NA other downstream 19474 364927 ~ 367431 (+)
G1509015 NA other downstream 97350 442803 ~ 444877 (+)
G1509068 NA other downstream 261169 606622 ~ 607207 (+)
G1509212 NA other downstream 435336 780789 ~ 781203 (+)

Expression


Co-expression Network