G1509046


Basic Information

Item Value
gene id G1509046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 516152 ~ 517225 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1726091
TGGCAGGCAGGTGATTACCACATAGCGTGGGCTTTATGGTCCAGCAGGTCACACCAGTTCACAAAGAATTAGCTTCAGACTTCTCCGAAAAATAAAGTCTGGATTATTCTCAAGCTCACGTACAGTAATCCTGATTACTTCAGCCCTCTCGCTCATTTTGATGAACTAACAAGGTTTAAGACAGAAACCCCAAACACTTCCTAGATCACGTTGGGGCTGACCCAAAACGTGGTCAACAGCTCTGTCCCCAAATACCCttctaatatactatatagctCTGTCCCCATATACCCTTCTAATGTGGTCAACAGCTCTGTCCTGATATACCCttctaatatactatatagctCTGTCCTGATATACCCttctaatatactatatagctCTGTCCCCAAATACCCTTCTAATGTGGTCAACAGATCTGTCCTGATATACCCttctaatatactatatagctCTGTCCCCAAATACCCTTCTAATGTGGTCAACAGATCTGTCCTGATATACCCttctaatatactatatagctCTGTCCTCAAATACCCttctaatatactatatagctCTGTCCTCAAATACCCttctaatatactatatagctCTGTCCCCATATACCCttctaatatactatatAGCTCTGTCCTGATATACCCttctaatatactatatagctCTGTCCCCAAATACCCttctaatatactatatagctCTGTCCCCAAATACCCttctaatatactatatagctCTGTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106536431, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1726091 True 750 lncRNA 0.40 2 516152 517225

Neighbor

gene id symbol gene type direction distance location
LOC118941071 NA coding upstream 90021 422280 ~ 426131 (+)
LOC110528717 LOC106575929 coding upstream 426651 76903 ~ 89501 (+)
LOC110516182 LOC106575004 coding downstream 23155 540380 ~ 550487 (+)
LOC110515805 LOC106575000 coding downstream 37705 554930 ~ 570129 (+)
LOC110515393 LOC106575008 coding downstream 72517 589742 ~ 621439 (+)
LOC118941073 LOC106575007 coding downstream 257625 774850 ~ 784873 (+)
LOC110495331 LOC106593605 coding downstream 272561 789678 ~ 792686 (+)
G1509027 NA non-coding upstream 28160 487190 ~ 487992 (+)
G1509015 NA non-coding upstream 71275 442803 ~ 444877 (+)
G1509013 NA non-coding upstream 74620 441214 ~ 441532 (+)
G1508992 NA non-coding upstream 112193 403364 ~ 403959 (+)
G1508983 NA non-coding upstream 133716 380724 ~ 382436 (+)
G1509051 NA non-coding downstream 8983 526208 ~ 526726 (+)
G1509020 LOC106574916 non-coding downstream 25522 542747 ~ 578585 (+)
G1509056 NA non-coding downstream 27669 544894 ~ 548998 (+)
G1509060 NA non-coding downstream 51500 568725 ~ 569239 (+)
G1509061 NA non-coding downstream 58390 575615 ~ 576146 (+)
G1508979 NA other upstream 148721 364927 ~ 367431 (+)
G1508964 NA other upstream 180975 334432 ~ 335177 (+)
G1509068 NA other downstream 89397 606622 ~ 607207 (+)
G1509212 NA other downstream 263564 780789 ~ 781203 (+)
G1509697 NA other downstream 870806 1388031 ~ 1389178 (+)
G1509914 NA other downstream 1165067 1682292 ~ 1682858 (+)

Expression


Co-expression Network