G1509218


Basic Information

Item Value
gene id G1509218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 793051 ~ 793482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1726342
TGGATAAAATATCACCTTTTCATTTTGTGTATTTTGTTTTGCAGTGCAAACATTCTATGCATTGGATAAAAACACTACATTTAAGTATCTGCCAGTAGAGCTGTGTGGAATGTGGAACGAAATCACTGTTAATGCCTGTTTTTCCACCTTAAAGACACAACGTTGTTTTTGTCGTCGTGTTAATTGTTCAAAAATAACTTTGTGTTTGAGAAAAGATTTTACTTGTGCACAAGTATGTTTACAAACTGCGACGGCCACATGTGCGTGCATCACGAAATGTCCCACGTGTCCTCATGTAGCTGACGTTTGACgaattccttccttcctccctctgttcttctGTTGTCTACTTGTTTTCATTGGTATTCTACTCATCCTGTAAGCCAAATCCAACAGGGAAGTGTGTCCCATGCAGCTATATCTTCTAAATAA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1726342 True 432 lncRNA 0.38 1 793051 793482

Neighbor

gene id symbol gene type direction distance location
LOC110495331 LOC106593605 coding upstream 365 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 8178 774850 ~ 784873 (+)
LOC110515393 LOC106575008 coding upstream 171612 589742 ~ 621439 (+)
LOC110515805 LOC106575000 coding upstream 222922 554930 ~ 570129 (+)
LOC110516182 LOC106575004 coding upstream 242564 540380 ~ 550487 (+)
LOC118941054 NA coding downstream 60888 854370 ~ 859799 (+)
LOC118941055 NA coding downstream 937742 1731224 ~ 1732090 (+)
tdrd3 LOC106592742 coding downstream 1584451 2377933 ~ 2453770 (+)
LOC118941056 NA coding downstream 2420556 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 2505959 3299441 ~ 3300228 (+)
G1509207 NA non-coding upstream 22037 770782 ~ 771014 (+)
G1509205 NA non-coding upstream 25026 767821 ~ 768025 (+)
G1509188 NA non-coding upstream 77535 712117 ~ 715516 (+)
G1509175 NA non-coding upstream 161364 631430 ~ 631687 (+)
G1509221 NA non-coding downstream 2390 795872 ~ 796361 (+)
G1509222 NA non-coding downstream 6892 800374 ~ 800659 (+)
G1509223 NA non-coding downstream 7460 800942 ~ 801238 (+)
G1509228 NA non-coding downstream 15945 809427 ~ 809668 (+)
G1509229 NA non-coding downstream 20845 814327 ~ 814580 (+)
G1509212 NA other upstream 11848 780789 ~ 781203 (+)
G1509068 NA other upstream 185844 606622 ~ 607207 (+)
G1509015 NA other upstream 348174 442803 ~ 444877 (+)
G1508979 NA other upstream 425620 364927 ~ 367431 (+)
G1509697 NA other downstream 594549 1388031 ~ 1389178 (+)
G1509914 NA other downstream 888810 1682292 ~ 1682858 (+)
G1510408 LOC106576654 other downstream 1740830 2534312 ~ 2534675 (+)
G1510524 LOC106597055 other downstream 1911360 2704842 ~ 2705497 (+)

Expression


Co-expression Network