G1509222


Basic Information

Item Value
gene id G1509222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 800374 ~ 800659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1726346
ACCGGCCAGGCAGGGGCTCGAGATGAAGTCCCGGTGTCTGACGGAACTAAAGCTCCTAATATGTTAATGACCGTAGGGGATGCCGGAAGGTACTGGCCCGGTTTACTACCGGCCTCAGCTGCCGCAGCACCATATGTCAACCAGGTTGGCCACGTGTATATCTATTAATCAAGAAGATGTTTcgtattaaaaaaacaacaacttattAAACAATATCCATTCCAGTTAAACCAATAATAACTACTATAGCACCAGTAATGGCGACACAAATGCCAAATAAAAAATC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1726346 True 286 lncRNA 0.44 1 800374 800659

Neighbor

gene id symbol gene type direction distance location
LOC110495331 LOC106593605 coding upstream 7688 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 15501 774850 ~ 784873 (+)
LOC110515393 LOC106575008 coding upstream 178935 589742 ~ 621439 (+)
LOC110515805 LOC106575000 coding upstream 230245 554930 ~ 570129 (+)
LOC110516182 LOC106575004 coding upstream 249887 540380 ~ 550487 (+)
LOC118941054 NA coding downstream 53711 854370 ~ 859799 (+)
LOC118941055 NA coding downstream 930565 1731224 ~ 1732090 (+)
tdrd3 LOC106592742 coding downstream 1577274 2377933 ~ 2453770 (+)
LOC118941056 NA coding downstream 2413379 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 2498782 3299441 ~ 3300228 (+)
G1509221 NA non-coding upstream 4013 795872 ~ 796361 (+)
G1509218 NA non-coding upstream 6892 793051 ~ 793482 (+)
G1509207 NA non-coding upstream 29360 770782 ~ 771014 (+)
G1509205 NA non-coding upstream 32349 767821 ~ 768025 (+)
G1509223 NA non-coding downstream 283 800942 ~ 801238 (+)
G1509228 NA non-coding downstream 8768 809427 ~ 809668 (+)
G1509229 NA non-coding downstream 13668 814327 ~ 814580 (+)
G1509270 NA non-coding downstream 24150 824809 ~ 825169 (+)
G1509272 NA non-coding downstream 27293 827952 ~ 828157 (+)
G1509212 NA other upstream 19171 780789 ~ 781203 (+)
G1509068 NA other upstream 193167 606622 ~ 607207 (+)
G1509015 NA other upstream 355497 442803 ~ 444877 (+)
G1508979 NA other upstream 432943 364927 ~ 367431 (+)
G1509697 NA other downstream 587372 1388031 ~ 1389178 (+)
G1509914 NA other downstream 881633 1682292 ~ 1682858 (+)
G1510408 LOC106576654 other downstream 1733653 2534312 ~ 2534675 (+)
G1510524 LOC106597055 other downstream 1904183 2704842 ~ 2705497 (+)

Expression


Co-expression Network