G1509223


Basic Information

Item Value
gene id G1509223
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 800942 ~ 801238 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1726347
CGGGGATAAACCGGGGGAGAAATGCTTCTATTTCCTAGTGGCTGGTTTGACCTTGCGTTAAGACAAAATTACTCGACAGAAAAGGAAGAAAAAAGAACAAGGAAGGAAACAGAAAAGATAATAACCAACATCTACTAGAGAAATATAGGAAGACGATAGATAAAGCCGTCACAGGGGCTATACTAACTCAGAATAAAATAGATGTTAACATATAATAACTGTCGATATAGCCTACAAAATGATGGATTTATTTCAATAGTTATTGCGTTATAATTTGAGTAATCTGCACATCacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1726347 True 297 lncRNA 0.35 1 800942 801238

Neighbor

gene id symbol gene type direction distance location
LOC110495331 LOC106593605 coding upstream 8256 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 16069 774850 ~ 784873 (+)
LOC110515393 LOC106575008 coding upstream 179503 589742 ~ 621439 (+)
LOC110515805 LOC106575000 coding upstream 230813 554930 ~ 570129 (+)
LOC110516182 LOC106575004 coding upstream 250455 540380 ~ 550487 (+)
LOC118941054 NA coding downstream 53132 854370 ~ 859799 (+)
LOC118941055 NA coding downstream 929986 1731224 ~ 1732090 (+)
tdrd3 LOC106592742 coding downstream 1576695 2377933 ~ 2453770 (+)
LOC118941056 NA coding downstream 2412800 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 2498203 3299441 ~ 3300228 (+)
G1509222 NA non-coding upstream 283 800374 ~ 800659 (+)
G1509221 NA non-coding upstream 4581 795872 ~ 796361 (+)
G1509218 NA non-coding upstream 7460 793051 ~ 793482 (+)
G1509207 NA non-coding upstream 29928 770782 ~ 771014 (+)
G1509228 NA non-coding downstream 8189 809427 ~ 809668 (+)
G1509229 NA non-coding downstream 13089 814327 ~ 814580 (+)
G1509270 NA non-coding downstream 23571 824809 ~ 825169 (+)
G1509272 NA non-coding downstream 26714 827952 ~ 828157 (+)
G1509273 NA non-coding downstream 27145 828383 ~ 828668 (+)
G1509212 NA other upstream 19739 780789 ~ 781203 (+)
G1509068 NA other upstream 193735 606622 ~ 607207 (+)
G1509015 NA other upstream 356065 442803 ~ 444877 (+)
G1508979 NA other upstream 433511 364927 ~ 367431 (+)
G1509697 NA other downstream 586793 1388031 ~ 1389178 (+)
G1509914 NA other downstream 881054 1682292 ~ 1682858 (+)
G1510408 LOC106576654 other downstream 1733074 2534312 ~ 2534675 (+)
G1510524 LOC106597055 other downstream 1903604 2704842 ~ 2705497 (+)

Expression


Co-expression Network