G1509578


Basic Information

Item Value
gene id G1509578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 1292143 ~ 1295513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1726811
ATgtcccagaggcccatcctcatcagaacacacacagattcTAACAACCCCTTATTCTGTTGAATTAAAACAACCGTTTGATGCACTTAAAGTATTATTACATAATCTTGCTATTTTGCTCTCATAGGCGTTCCTTCCTCaaacagacactatctctccatcaCTGCTGGGCGGCGTtctctccttcaacagacactatctctccatccctgctgggcagcgttccctccttcaacagacactatctctccatccctgctaggcagcgttccctccttcaacagacactatctctccatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1726811 True 300 lncRNA 0.47 2 1292143 1295513

Neighbor

gene id symbol gene type direction distance location
LOC118941054 NA coding upstream 432344 854370 ~ 859799 (+)
LOC110495331 LOC106593605 coding upstream 499457 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 507270 774850 ~ 784873 (+)
LOC110515393 LOC106575008 coding upstream 670704 589742 ~ 621439 (+)
LOC110515805 LOC106575000 coding upstream 722014 554930 ~ 570129 (+)
LOC118941055 NA coding downstream 435711 1731224 ~ 1732090 (+)
tdrd3 LOC106592742 coding downstream 1082420 2377933 ~ 2453770 (+)
LOC118941056 NA coding downstream 1918525 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 2003928 3299441 ~ 3300228 (+)
LOC118941040 LOC106593609 coding downstream 3322575 4618088 ~ 4624857 (+)
G1509557 NA non-coding upstream 46492 1243840 ~ 1245651 (+)
G1509554 NA non-coding upstream 58623 1232971 ~ 1233520 (+)
G1509551 NA non-coding upstream 69252 1221286 ~ 1222891 (+)
G1509539 NA non-coding upstream 89677 1202240 ~ 1202466 (+)
G1509538 NA non-coding upstream 90524 1201168 ~ 1201619 (+)
G1509600 NA non-coding downstream 36681 1332194 ~ 1333381 (+)
G1509602 NA non-coding downstream 38663 1334176 ~ 1334917 (+)
G1509679 NA non-coding downstream 60547 1356060 ~ 1356399 (+)
G1509695 NA non-coding downstream 90520 1386033 ~ 1386715 (+)
G1509699 NA non-coding downstream 98596 1394109 ~ 1394603 (+)
G1509212 NA other upstream 510940 780789 ~ 781203 (+)
G1509068 NA other upstream 684936 606622 ~ 607207 (+)
G1509015 NA other upstream 847266 442803 ~ 444877 (+)
G1508979 NA other upstream 924712 364927 ~ 367431 (+)
G1509697 NA other downstream 92518 1388031 ~ 1389178 (+)
G1509914 NA other downstream 386779 1682292 ~ 1682858 (+)
G1510408 LOC106576654 other downstream 1238799 2534312 ~ 2534675 (+)
G1510524 LOC106597055 other downstream 1409329 2704842 ~ 2705497 (+)

Expression


Co-expression Network